Phylogenetic analysis of Blattabacterium,endosymbiotic bacteria from the wood roach,Cryptocercus (Blattodea: Cryptocercidae), including a description of three new species

Members of the cockroach genus Cryptocercus are wood-feeding, subsocial insects that live in temperate forests of the Nearctic and Palaearctic. At present, nine species are recognized: Cryptocercus relictus and Cryptocercus kyebangensis in eastern Asia and Russia, Cryptocercus primarius and Cryptocercus matilei in southwestern China, Cryptocercus clevelandi in the western USA, and Cryptocercus darwini, Cryptocercus garciai, Cryptocercus punctulatus, and Cryptocercus wrighti in the eastern USA. Like all extant cockroaches, Cryptocercus harbor endosymbiotic bacteria, Blattabacterium, in their fat bodies. The endosymbionts in all cockroaches have been considered a single species, Blattabacterium cuenoti, since their discovery about a century ago. However, a recent analysis of DNA sequences from representatives of four cockroach families has indicated that there is considerable DNA sequence divergence among B. cuenoti from different host species. As a part of our studies on the evolution of Cryptocercus, we examined DNA sequence divergence among B. cuenoti from six of the nine known Cryptocercus species. Specifically, we sequenced approximately 2,400 bp of the 16S rRNA and 23S rRNA genes of B. cuenoti from six species of Cryptocercus. We found that B. cuenoti in Cryptocercus has differentiated into multiple monophyletic lineages distinguishable by DNA sequence of rRNA genes and host association. Our sequence divergence estimates were consistent with those reported for other, congeneric bacterial species. We propose the recognition of three new species of Blattabacterium within Cryptocercus species as follows: Blattabacterium relictus sp. nov. in C. relictus, Blattabacterium clevelandi sp. nov. in C. clevelandi, and Blattabacterium punctulatus sp. nov. in C. darwini, C. garciai, C. punctulatus, and C. wrighti.     

Differential Resource Use between Native and Introduced Gray Squirrels

Differences in habitat requirements and the spatial distribution of habitat for native and introduced species can determine outcomes of biological invasions. Introduced eastern gray squirrels (Sciurus carolinensis) have displaced native red squirrels (S. vulgaris) in Europe and have been implicated as a contributing factor to the decline of western gray squirrels (S. griseus) in North America. Eastern and western gray squirrels are associated with oak (Quercus spp.), but little is known about how these species interact. From April 2007 to April 2012, we radio-tracked sympatric eastern and western gray squirrels in western Washington to compare habitat use and evaluate competitive interactions. We developed resource utilization functions for each species and evaluated distribution of habitat on Joint Base Lewis-McChord, Washington, USA. Both species shared affinity for closed canopy forests and oaks; however, important differences in relationships with riparian areas and shrub cover resulted in low overlap in habitat distribution, which likely limited potential competitive interactions. Eastern gray squirrels appeared restricted to areas around wetlands likely because they supported the deciduous tree species that comprise habitat for this species in its native range. Use by western gray squirrels, but not eastern gray squirrels, significantly decreased with increasing shrub cover. Forestry practices that promote mixed oak-conifer with little shrub cover in uplands can benefit western gray squirrels and minimize interactions with eastern gray squirrels. © 2020 The Wildlife Society.     

Perspectives on Palaearctic and Nearctic bird migration; comparisons and overview of life-history and ecology of migrant passerines

In this paper we compare ecological attributes of tropical migrant passerines from the Nearctic and western Palaearctic, focusing particularly on habitat association patterns during both breeding and wintering seasons. Three regions were compared: Europe, western and eastern North America. Breeding bird census data from 32 studies (each including at least four stages of forest succession) were used to assess the association patterns of breeding habitats among tropical migrants. For each species we calculated an index of habitat diversity and habitat preference.
Tropical migrants preferred earlier successional stages than other birds in Europe. The opposite was true in eastern North America. In eastern North America, tropical migrants tended to be associated with a smaller range of serai stages than other passerine species. In their winter quarters, Palaearctic migrants live primarily in open habitats, such as savannas, whereas eastern Nearctic migrants make more frequent use of evergreen forests. Migrants from western North America show the greatest match between breeding and wintering habitats.
We relate the results to the taxonomy and probable history of contemporary avifaunas and vegetation formations of the Old and New World. Taxonomically, tropical migrants from different parts of the Holarctic are less closely related to each other than residents and short-distance migrants. Tropical and temperate avifaunas are more closely related to each other in the New World than in the Old World. Conservation implications of the between-continent differences are briefly discussed.     

Ecological niche conservation and differentiation in the wood-feeding cockroaches, Cryptocercus, in the United States

The distribution of a species is determined by a set of ecological correlates (biotic and abiotic factors) and historical phenomena that define and constrain its ecological niche. By examining the geographical projection of the ecological niche, it is possible to identify areas that are suitable for the species ecologically but that are not actually inhabited. Previous studies have used such discords to anticipate the existence of undescribed species; the absence of species may also result from historical barriers that have prevented colonization of the area. Thus, discords between potential and realized niches of a species may result from aspects of the species’s biology (e.g. lack of dispersal ability, specific habitat requirements) or from barriers to dispersal. In this study, we developed ecological niche models of the five Nearctic species of wood‐feeding cockroaches in the genus Cryptocercus. One species, C. clevelandi, occurs in the western USA and four (C. darwini, C. garciai, C. punctulatus, C. wrighti) are distributed in the Appalachian Mountains in the eastern USA. In general, modelled niches for all species showed ecological restriction relative to the total range of available conditions. Niche models for the eastern USA species predicted the geographical distributions of the other eastern USA species, with the exception of C. garciai, suggesting general overall conservatism in ecological characteristics. Some interspecific differences in modelled niches were also apparent. In general, C. clevelandi was predicted to occupy cooler and drier areas relative to the eastern USA species; among the eastern USA species, C. darwini and C. garciai were predicted to inhabit warmer areas relative to C. punctulatus and C. wrighti. Interspecific differences and similarities were consistent with the phylogenetic relationships among Cryptocercus species previously reported. © 2007 The Linnean Society of London, Biological Journal of the Linnean Society, 2007, 90 , 457–466.     

Coevolution between a cockroach and its bacterial endosymbiont: a biogeographical perspective

Cryptocercus are subsocial, xylophagous cockroaches that live in temperate forests. Like other cockroaches, Cryptocercus harbour endosymbiotic bacteria in their fat bodies. Two species of Cryptocercus occur in the palaearctic, one each in eastern Russia and south-central China. In the USA, there are five species: one in the north-west and four in the south-east. Little is known about the relationship between the Eurasian and North American Cryptocercus or the causes of the disjunct distribution. Here, a molecular phylogeny for six out of the seven Cryptocercus species and their endosymbionts is inferred in an attempt to understand the evolution and biogeography of the genus. Our analysis showed that the North American Cryptocercus are monophyletic, suggesting that a single colonization event was followed by vicariance. There was complete concordance between the host and endosymbiont phylogenetic trees. Divergence estimates based on endosymbiont DNA sequences suggested that the palaearctic and nearctic Cryptocercus diverged 70-115 million years (Myr) ago and the eastern- and western-USA species diverged 53-88 Myr ago. These divergence estimates were correlated with biogeographical events, and a hypothesis is presented to explain the current distribution of Cryptocercus. Our findings suggest that Cryptocercus has had a long evolutionary history, dating back to the Jurassic.     

Palaeoclimatic variation, adaptation and biogeography of inversion polymorphisms in natural populations of Drosophila robusta

Studies of natural and sexual selection in wild populations of Drosophila have historically provided strong inference for the maintenance of inversion polymorphism. Analysis of geographical variation in the Drosophila robusta chromosomal data collected over more than 50 years from 133 natural populations across eastern North America has confirmed several north–south and east–west clines in the frequencies of some gene arrangements and linked arrangement combinations. Patterns of geographical variation, including several north–south clines, revealed by regression and spatial autocorrelation analyses are concordant with palaeoclimatic shifts, Pleistocene glaciations and historical changes in the composition of North American forest communities. Because D. robusta is a sap-breeder, using the microbe-infested sap exudates of a number of deciduous tree species in which they carry out their life cycle, shifts in climate and palaeovegetation types since the formation of the eastern deciduous forests in the Miocene are hypothesized to be major factors influencing patterns of inversion polymorphisms across the range of this drosophilid species. In areas where sharp deviations in frequencies have been observed, particularly in the mid-western and western portions of the range, these divisions parallel historical geographical disjunctions in the species range that have yet to promote divergence and species formation despite the long history of D. robusta in North America.  © 2004 The Linnean Society of London, Biological Journal of the Linnean Society , 2004, 81 , 395–411.     

Evaluating hypotheses on the origin and diversification of the ringneck snake Diadophis punctatus (Colubridae: Dipsadinae)

Close affinities recognized between taxa in Mexico and the contiguous USA have led to a variety of biogeographical scenarios. One such hypothesis suggests that species that occur in both countries have an origin in central Mexico followed by dispersal into the USA. This study expands upon previous phylogeographical work of the ringneck snake Diadophis punctatus by incorporating new data from previously unsampled areas appropriate to critically assess hypotheses regarding a Mexican origin for this species. Maximum likelihood and maximum parsimony analyses inferred a derived position for the lineage from southern Mexico with constraint tests for alternate evolutionary hypotheses resulting in significantly worse likelihood values. Ancestral area reconstructions inferred an origin for D. punctatus in the south‐eastern USA followed by a south‐east to north‐east then westward directionality of historical migration. The position within the phylogeny and date estimate for the south‐western + Mexico clade suggests a recent invasion into central Mexico with expansion into the Nearctic/Neotropic transition zone. The extensive lineage diversity inferred from the mtDNA suggests that the genus is a complex of cryptic species whose conservational status should be re‐evaluated on both the national and regional levels. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2010, 158 , 629–640.     

The diversification of Nearctic mammals in the Mexican transition zone

The boundary between the Nearctic and Neotropical regions has been delineated using different approaches, methods and taxa. Using a panbiogeographical approach, identification of nodes can help understand the dynamics and evolution of the boundary. We analysed the distribution patterns of 46 Mexican land mammal species belonging to the Nearctic biotic component and delineated generalized tracks and nodes, in order to determine the southernmost boundary of the Nearctic region in Mexico. We found six generalized tracks and nine nodes; the latter located largely in the Sierra Madre Oriental, Transmexican Volcanic Belt, Sierra Madre del Sur and Chiapas biogeographical provinces. The highlands of Chiapas were found to represent the southernmost area inhabited by Nearctic taxa. The other biogeographical provinces, together with the Sierra Madre Occidental and Balsas Basin provinces, represent the Mexican transition zone in the strict sense. Instead of a classic static boundary, this transition zone represents an evolutionarily 'active' zone, where several speciation events have taken place in the past.  © 2004 The Linnean Society of London, Biological Journal of the Linnean Society , 2004, 83 , 327–339.     

Molecular phylogeny of Cryptocercus wood-roaches based on mitochondrial COII and 16S sequences, and chromosome numbers in Palearctic representatives

Woodroaches of the genus Cryptocercus are subsocial and xylophagous cockroaches, distributed in North America and Asia. Studies on male chromosome number in Nearctic species have shown that diploid numbers vary from 2n=37 to 2n=47; numbers from Palearctic species were heretofore unknown. Two hypotheses have been proposed to explain the varying number of chromosomes among Nearctic species: the serial reduction hypothesis, and the parallel scenario. We performed phylogenetic analyses of the COII gene in these species and found evidence for the topology (47(45(43(39,37), which is congruent with the serial reduction hypothesis. We also determined chromosome numbers for the first time in Palearctic species, and found Cryptocercus primarius and Cryptocercus relictus to have relatively low chromosome numbers (2n=17-21) compared to their Nearctic relatives. Finally, our study determined the phylogenetic position of Cryptocercus primarius among other Asian taxa.     

基于地形因子的天童地区常绿树种和落叶树种共存机制研究

位于亚热带的浙江天童和古田山常绿阔叶林大样地分布有较高比例的落叶树种,那么它们与常绿树种的共存机制是什么?常绿树种和落叶树种生态习性差异较大,二者对生境的选择应有所不同,我们推测生境分化可能是两类植物实现共存的主要机制。为检验该假设,我们以天童20ha动态样地调查数据为依托,选择个体数≥20的55个常绿树种和42个落叶树种作为分析对象,用典范对应分析(CCA)研究了地形因子对二者分布的影响差异,用torus转换检验来分析常绿树种和落叶树种与各类地形生境的关联。结果如下:(1)CCA分析表明地形因子对常绿树种分布的解释量为19.2%,对落叶树种分布的解释量为7.0%。(2)torus转换检验结果表明,与沟谷成正关联的常绿树种和落叶树种的比例分别为16.4%和28.6%,成负关联的比例分别为40%和7%;与山脊成正关联的常绿树种和落叶树种的比例分别为41.8%和4.8%,成负关联的比例分别为10.9%和47.6%;与受干扰生境成正关联的常绿树种和落叶树种的比例分别为16.4%和42.9%。上述结果说明地形对常绿树种分布的影响大于落叶树种;两个植物类群对生境的选择多呈现相反格局,尤其是在沟谷生境和山脊生境,这进一步表明生境分化是常绿树种和落叶树种共存的重要机制之一,生态位理论在一定程度上能较好地解释亚热带常绿阔叶林物种多样性的维持。     

Fine-Scale Analysis of Mount Graham Red Squirrel Habitat Following Disturbance

ABSTRACT Habitat destruction and degradation are major factors in reducing abundance, placing populations and species in jeopardy. Monitoring changes to habitat and identifying locations of habitat for a species, after disturbance, can assist mitigation of the effects of human-caused or -amplified habitat disturbance. Like many areas in the western United States, the Pinaleño Mountains of southeastern Arizona, USA, have suffered catastrophic fire and large-scale insect outbreaks in the last decade. The federally endangered Mt. Graham red squirrel (Tamiasciurus hudsonicus grahamensis) is only found in the Pinaleño Mountains, and to assess effects of forest disturbance on habitat we modeled their potential habitat by identifying characteristics of cover surrounding their centrally defended middens. We classified high-spatial resolution satellite imagery into ground cover classes, and we used logistic regression to determine areas used by squirrels. We also used known midden locations in conjunction with slope, elevation, and aspect to create a predictive habitat map. Squirrels selected areas of denser forest with higher seedfall for midden sites. Among active middens, those in the densest and least damaged forests were occupied in more seasons than those in more fragmented and damaged areas. The future conservation of red squirrels and the return of healthy mature forests to the Pinaleño Mountains will rely on preservation of mixed conifer zones of the mountain and active restoration of spruce-fir forests to return them to squirrel habitat. Our ability to evaluate the spectrum of fine- to coarse-scale disturbance effects (individual tree mortality to area wide boundaries of a disturbance) with high-resolution satellite imagery shows the utility of this technique for monitoring future disturbances to habitat of imperiled species.     

Insect taxonomic diversity in the Russian Far East

The insect fauna of the Russian Far East comprises 634 families from 31 orders. The estimated species number is 31500. The largest orders are Hymenoptera (76 families, 9000 estimated species), Diptera (120 families, 8000 estimated species), Coleoptera (114 families, 5500 estimated species), and Lepidoptera (81 families, 5000 estimated species). The fractions of the main insect orders in the fauna of the Russian Far East correspond to those in the Holarctic temperate zone. The high biodiversity of insects in the Russian Far East results from the position of this region extending across several climatic zones. There are four levels of diversity both for the families and for the species, corresponding to the tundra, taiga, the transitional area between taiga and broadleaved forests, and the broadleaved forest zone. The number of insect families increases by 3 times while that of species increases by 20 times from the tundra to the broadleaved forests. Differentiation of the insect fauna of the Russian Far East results from the recent climatic situation (the influence of the Pacific monsoon) and the geologic history (broadleaved forest refugia resulting from the absence of complete ice cover during Pleistocenic glaciation in the south of the Russian Far East); it reflects deep faunistic connections of the eastern Palaearctic with the Nearctic and Oriental Regions. The mountain areas in the North Pacific are the refugia of the Mesozoic and Tertiary insect faunas. The Pacific may have substantially reduced the Cenozoic aridization in the northern hemisphere, which was one of the important factors of formation of the recent biota in the Palaearctic and Nearctic regions.     

Is it really you,Orthotrichum acuminatum? Ascertaining a new case of intercontinental disjunction in mosses

Intercontinental disjunct distributions are a main issue in current biogeography. Bryophytes usually have broad distribution ranges and therefore constitute an interesting subject of study in this context. During recent fieldwork in western North America and eastern Africa, we found new populations of a moss morphologically similar to Orthotrichum acuminatum. So far this species has been considered to be one of the most typical epiphytic mosses of the Mediterranean Basin. The new findings raise some puzzling questions. Do these new populations belong to cryptic species or do they belong to O. acuminatum, a species which then has a multiple‐continent disjunct range? In the latter case, how could such an intercontinental disjunction be explained? To answer these questions, an integrative study involving morphological and molecular approaches was conducted. Morphological results reveal that Californian and Ethiopian samples fall within the variability of those from the Mediterranean Basin. Similarly, phylogenetic analyses confirm the monophyly of these populations, showing that O. acuminatum is one of the few moss species with a distribution comprising the western Nearctic, the western Palaearctic and Palaeotropical eastern Africa. Pending a further genetic and phylogeographical study to support or reject the hypothesis, a process of long‐distance dispersal (LDD) is hypothesized to explain this distribution and the origin of the species is suggested to be the Mediterranean Basin, from where diaspores of the species may have migrated to California and Ethiopia. The spore release process in O. acuminatum is revisited to support the LDD hypothesis, © 2015 The Linnean Society of London, Botanical Journal of the Linnean Society, 2016, 180 , 30–49.     

Effects of habitat quality and landscape structure on saproxylic species dwelling in boreal spruce-swamp forests

Intensive forest management has caused loss and fragmentation of old‐growth forests and reduced the amount of dead wood throughout northwest Europe. Changes in habitat availability are reflected in occurrence patterns of habitat‐specialist species only after a certain time lag. Here we analyse the responses of wood‐decomposing fungi and saproxylic beetles inhabiting patches of spruce‐swamp forest to habitat quality, loss and isolation at three different spatial scales in eastern Finland and adjacent Russian Karelia, where forestry has been very marginal until recently. Both rare specialist species and common generalist species were included in the study to reveal whether their occurrence patterns differ. Variables describing habitat quality (density and continuity of host trees, patch area) turned out significant in explaining species' incidences (proportion of occupied host trees) in only a few cases, probably because of the relatively high quality of all study patches. Despite this fact, and consistent with our hypothesis, incidences of all the eight specialist species were higher in Russia than Finland, and the difference was significant in the two most strict habitat specialists, Pytho kolwensis and Phlebia centrifuga. In contrast, incidences of three out of four generalist species were higher in Finland than in Russia, and the difference was significant in Rhagium inquisitor. In a subset of 21 patches in Finland, we used a metapopulation model to predict the probability of each patch to be currently occupied by a species given the known spatiotemporal distribution of suitable forest stands during the last 50 years. The degree of isolation alone explained significantly the incidences of five species. However, including habitat variables into the models altered some of the effects. Moreover, inconsistent with our hypothesis, isolation appeared to also negatively affect some very common generalist species. Inclusion of these species in the study disclosed that apparently significant effects of spatiotemporal isolation should be interpreted cautiously.     

Distribution and genetic divergence of two parapatric sibling ant species in Central Europe

The two sibling ant species Temnothorax nylanderi and Temnothorax crassispinus are widely distributed throughout deciduous forests in Europe. Their resemblance in morphology and similar ecological requirements suggest that they evolved from the same ancestral species in different glacial refugia and re-immigrated into Central Europe after the last ice age. Here, we show that the two species are parapatrically distributed in south-eastern Germany and hybridize along a narrow contact zone close to the continental divide. Phylogeographical data based on the mitochondrial genes cytochrome oxidase subunit I and cytochrome b suggest that the dominant haplotypes for T. nylanderi and T. crassispinus might have diverged already 1.5–2 Mya. Intraspecific variability is extremely low in both species, which might be explained by severe bottlenecks during rapid postglacial expansion into Central Europe.  © 2006 The Linnean Society of London, Biological Journal of the Linnean Society , 2006, 88 , 223–234.     

A classification of the deciduous forest of eastern North America

Data from 300 forest stands, scattered over 29 states within the eastern North American deciduous forest, were subjected to detrended correspondence analysis (DCA) and two-way indicator species analysis (TWINSPAN) in an effort to identify classifiable units. Most species are widespread which provide a great deal of continuity in the vegetation.The deciduous forest can be divided into three forest regions: (1) northern, (2) central and (3) southern. The northern region corresponds to the hemlock-white pine-northern hardwood forest of Braun (1950). The central region includes the beech-maple and oak-hickory forests. The beech-maple as identified here includes the mixed mesophytic, beech-maple, maple-basswood and about half of the western mesophytic forests of Braun (1950). The oak-hickory includes Braun's oak-hickory, oak-chestnut and about half of the western mesophytic forests. The southern region coincides with the southern mixed hardwood forests.     

Phylogeography of a Holarctic nematode, Soboliphyme baturini, among mustelids: climate change, episodic colonization, and diversification in a complex host–parasite system

Phylogeography of Soboliphyme baturini , a nematode parasite in mustelids, is explored across Beringia. Sequences of the mitochondrial cytochrome c oxidase subunit I and nicotinamide adenine dinucleotide dehydrogenase subunit 4 genes were evaluated from 37 S. baturini , representing 19 localities throughout Alaska, Canada, and Siberia. A total of 30 haplotypes was recovered and maximum parsimony and Bayesian phylogenetic analyses support the recognition of a single species with a distribution extending from the Palearctic to the Nearctic. Within S. baturini , a host-specific partition in North America between Martes caurina and Martes americana was not identified. Instead, substantial geographic structure within S. baturini relates to the dynamic geological history of this northern region and especially the North Pacific Coast. Beringia and other coastal refugia along the western margin of North America played a large role during stadial maxima in the persistence and divergence of the parasite. Repeated events for biotic expansion and geographic colonization across the Bering Land Bridge and the Holarctic during glacial maxima in the Pleistocene appear to have facilitated at least two episodes of host-switching of this nematode among mustelids in populations now distributed in eastern Beringia.  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 96 , 651–663.     

A biogeographical perspective on the variation in mouse lemur density throughout Madagascar

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