Visuovestibular perception of self-motion modeled as a dynamic optimization process

 This article describes a computational model for the sensory perception of self-motion, considered as a compromise between sensory information and physical coherence constraints. This compromise is realized by a dynamic optimization process minimizing a set of cost functions. Measure constraints are expressed as quadratic errors between motion estimates and corresponding sensory signals, using internal models of sensor transfer functions. Coherence constraints are expressed as quadratic errors between motion estimates, and their prediction is based on internal models of the physical laws governing the corresponding physical stimuli. This general scheme leads to a straightforward representation of fundamental sensory interactions (fusion of visual and canal rotational inputs, identification of the gravity component from the otolithic input, otolithic contribution to the perception of rotations, and influence of vection on the subjective vertical). The model is tuned and assessed using a range of well-known psychophysical results, including off-vertical axis rotations and centrifuge experiments. The ability of the model to predict and help analyze new situations is illustrated by a study of the vestibular contributions to self-motion perception during automobile driving and during acceleration cueing in driving simulators. The extendable structure of the model allows for further developments and applications, by using other cost functions representing additional sensory interactions. Received: 10 October 2000 / Accepted in revised form: 12 August 2002 Acknowledgements. This research was performed within the framework of a CIFRE grant (ANRT contract #331/97) for the doctoral work of G. Reymond at RENAULT and LPPA. The authors wish to thank the anonymous reviewers and Prof. H. Mittelstaedt for their valuable suggestions. Correspondence to: G. Reymond (e-mail: gilles.reymond@renault.com, Tel.: +33-1-34952170, Fax: +33-1-34952730)     

Information-theoretic analysis of de-efferented single muscle spindles

 The information transmission properties of single, de-efferented primary muscle-spindle afferents from the hind limb of the cat were investigated. The gastrocnemius medialis muscle was stretched randomly while recording spike trains from several muscle-spindle afferents in the dorsal root. Two classes of input stimuli were used: (i) Gaussian noise with band-limited flat spectrum, and (ii) Gaussian noise with a more “naturalistic” 1/f ⁿ spectrum. The “reconstruction” method was used to calculate a lower bound to the information rate (in bits per second) between the muscle spindles and the spinal cord. Results show that in response to the flat-spectrum input, primary muscle-spindle afferents transfer information mainly about high frequencies, carrying 2.12 bits/spike. In response to naturalistic-spectrum inputs, primary muscle-spindle afferents transfer information about both low and high frequencies, with “spiking efficiency” increasing to 2.67 bits/spike. A simple muscle-spindle simulation model was analyzed with the same method, emphasizing the important part played by the intrafusal fiber mechanical properties in information transmission. Received: 22 January 2002 / Accepted in revised form: 17 June 2002 Correspondence to: Y. Tock (e-mail: ytock@tx.technion.ac.il, Fax: +972-4-8323041)     

Functional characteristics of directionally tuned neurons in the frontal visual field of the chipmunk striate cortex

Research was performed on the intracellular activity of 150 neurons belonging to area 17 of the binocular region of the chipmunk visual cortex, showing that 65% were directionally selective and tuned (to varying degrees) to the angle of boundaries between contrasting areas and a light bar; 18% were not tuned to the direction and angle of stimulus movement, while 17% were only activated by general illumination of the receptive field. Of 39 directionally tuned neurons tested in relation to moving and stationary stimuli, 16 responded to stimulus movement only, 13 reacted to presentation of stationary bars with prolonged tonic activation, seven with a brief phasic response, and three with a phasic-tonic response. All phasic neurons were more intensively activated at higher rates of movement than tonic cells. The article considers whether an analogy may be drawn between fast (phasic) and slow (or tonic) neurons with Y- and X-systems respectively.A. N. Severtsov Institute of Evolutionary Morphology and Ecology, Academy of Sciences of the USSR, Moscow. Translated from Neirofiziologiya, Vol. 20, No. 3, pp. 365–374, May–June 1988.     

Plant Remedies against Witches and the Evil Eye in a Spanish “Witches’ Village”

Plant Remedies against Witches and the Evil Eye in a Spanish “Witches’ Village.” An ethnobotanical survey was carried out to understand the traditional knowledge and current use of different preventive and curative plant remedies against witches and the evil eye in a Spanish rural community (Villarino de los Aires, Salamanca). Located in a Spanish region known as “Arribes del Duero,” this locality has historically been considered an important “witches’ village.” An anonymous questionnaire was answered by 52 people living in the village. The cultural importance index (CI) of each species was calculated. To analyze how knowledge varies as a function of the socio-demographic characteristics of the different informants, an analysis of covariance (ANCOVA) was performed, taking as variable to model the use-reports provided, and as explanatory variables the age, gender, and educational status. Age was the only variable that explained the variety in the number of plant remedies known; people over 60 knew significantly more plant remedies. Fifteen vascular plants were mentioned. The preventive remedies were particularly associated with key moments of the religious calendar. Branches gathered from olive trees, laurel, and/or rosemary are blessed on Palm Sunday, and then placed on window sills to protect people’s homes. During the celebration of Saint John’s Bonfire, aromatic plants are burnt, and the purifying and protecting power of the smoke emerges. The traditional use of plants hung behind doors of houses and stables to repel witches, and rituals for curing evil eye affecting people, animals, or even possessions were also revealed. Even today in rural communities of western Spain, there is a clear connection between popular religious and magic beliefs and their relationship with nature, especially plants.     

Detection of sinusoidal gratings by pattern-specific detectors: further evidence for the correlation principle in human vision

 The detection of compound sinusoidal gratings of various spatial frequency separations and four different grating sizes has been studied using the summation-to-threshold paradigm. Contrast interrelation functions have been measured and spatial frequency tuning estimates, based on the slope of the contrast interrelation function at two definite points, were derived using the “negative gradient technique” proposed by Logvinenko [Logvinenko (1995) Biol Cybern 73: 547–552]. It is shown that compound grating detection can be modelled by assuming pattern-specific sensory mechanisms for each of the spatial frequency components, which adapt to the periodicity and the size of the stimulus but not to its envelope function. Further, it is shown that relative sensitivity for a given spatial frequency separation can be predicted with good accuracy by the correlation of the grating components used for superposition. It is suggested that the most plausible implementation of the pattern correlation principle in human grating detection is the “grating cell” model. Received: 10 March 2000 / Accepted in revised form: 4 December 2000     

A neural mechanism for discrimination III: Visually perceived lengths and distances

A previously discussed neural mechanism for the discrimination of intensities is here applied to the judgment of visual lengths and distances on the assumption that the “intensity” associated with the magnitude being perceived is the intensity of innervation of the appropriate eye muscles necessary for scanning and fixating. Comparison with experimental data is made in the case of the judgment of lengths.     

The Origin of the Vertebrate Eye

In his considerations of “organs of extreme perfection,” Charles Darwin described the evidence that would be necessary to support the evolutionary origin of the eye, namely, demonstration of the existence of “numerous gradations” from the most primitive eye to the most perfect one, where each such tiny change had provided a survival advantage (however slight) to the organism possessing the subtly altered form. In this paper, we discuss evidence indicating that the vertebrate eye did indeed evolve through numerous subtle changes. The great majority of the gradual transitions that did occur have not been preserved to the present time, either in the fossil record or in extant species; yet clear evidence of their occurrence remains. We discuss the remarkable “eye” of the hagfish, which has features intermediate between a simple light detector and an image-forming camera-like eye and which may represent a step in the evolution of our eye that can now be studied by modern methods. We also describe the important clues to the evolutionary origin of the vertebrate eye that can be found by studying the embryological development of our own eye, by examining the molecular genetic record preserved in our own genes and in the genes of other vertebrates, and through consideration of the imperfections (or evolutionary “scars”) in the construction of our eye. Taking these findings together, it is possible to discuss in some detail how the vertebrate eye evolved.     

A computational framework for topographies of cortical areas

Self-organizing feature maps (SOFMs) represent a dimensionality-reduction algorithm that has been used to replicate feature topographies observed experimentally in primary visual cortex (V1). We used the SOFM algorithm to model possible topographies of generic sensory cortical areas containing up to five arbitrary physiological features. This study explored the conditions under which these multi-feature SOFMs contained two features that were mapped monotonically and aligned orthogonally with one another (i.e., “globally orthogonal”), as well as the conditions under which the map of one feature aligned with the longest anatomical dimension of the modeled cortical area (i.e., “dominant”). In a single SOFM with more than two features, we never observed more than one dominant feature, nor did we observe two globally orthogonal features in the same map in which a dominant feature occurred. Whether dominance or global orthogonality occurred depended upon how heavily weighted the features were relative to one another. The most heavily weighted features are likely to correspond to those physical stimulus properties transduced directly by the sensory epithelium of a particular sensory modality. Our results imply, therefore, that in the primary cortical area of sensory modalities with a two-dimensional sensory epithelium, these two features are likely to be organized globally orthogonally to one another, and neither feature is likely to be dominant. In the primary cortical area of sensory modalities with a one-dimensional sensory epithelium, however, this feature is likely to be dominant, and no two features are likely to be organized globally orthogonally to one another. Because the auditory system transduces a single stimulus feature (i.e., frequency) along the entire length of the cochlea, these findings may have particular relevance for topographic maps of primary auditory cortex. This research was supported by The McDonnell Center for Higher Brain Function, The Wallace H. Coulter Foundation and NIH grant DC008880.     

The photoactivation energy of the visual pigment in two spectrally different populations of <Emphasis Type="Italic">Mysis relicta</Emphasis> (Crustacea,Mysida)

We report the first study of the relation between the wavelength of maximum absorbance (λ_max) and the photoactivation energy (E _a) in invertebrate visual pigments. Two populations of the opossum shrimp Mysis relicta were compared. The two have been separated for 9,000 years and have adapted to different spectral environments (“Sea” and “Lake”) with porphyropsins peaking at λ_max=529 nm and 554 nm, respectively. The estimation of E _a was based on measurement of temperature effects on the spectral sensitivity of the eye. In accordance with theory (Stiles in Transactions of the optical convention of the worshipful company of spectacle makers. Spectacle Makers’ Co., London, 1948), relative sensitivity to long wavelengths increased with rising temperature. The estimates calculated from this effect are E _a,529=47.8±1.8 kcal/mol and E _a,554=41.5±0.7 kcal/mol (different at P<0.01). Thus the red-shift of λ_max in the “Lake” population, correlating with the long-wavelength dominated light environment, is achieved by changes in the opsin that decrease the energy gap between the ground state and the first excited state of the chromophore. We propose that this will carry a cost in terms of increased thermal noise, and that evolutionary adaptation of the visual pigment to the light environment is directed towards maximizing the signal-to-noise ratio rather than the quantum catch.     

The influence of environmental water on the hydrogen stable isotope ratio in aquatic consumers

Aquatic food webs are subsidized by allochthonous resources but the utilization of these resources by consumers can be difficult to quantify. Stable isotope ratios of hydrogen (deuterium:hydrogen; δD) potentially distinguish allochthonous inputs because δD differs between terrestrial and aquatic primary producers. However, application of this tracer is limited by uncertainties regarding the trophic fractionation of δD and the contributions of H from environmental water (often called “dietary water”) to consumer tissue H. We addressed these uncertainties using laboratory experiments, field observations, modeling, and a literature synthesis. Laboratory experiments that manipulated the δD of water and food for insects, cladoceran zooplankton, and fishes provided strong evidence that trophic fractionation of δD was negligible. The proportion of tissue H derived from environmental water was substantial yet variable among studies; estimates of this proportion, inclusive of lab, field, and literature data, ranged from 0 to 0.39 (mean 0.17 ± 0.12 SD). There is a clear need for additional studies of environmental water. Accounting for environmental water in mixing models changes estimates of resource use, although simulations suggest that uncertainty about the environmental water contribution does not substantially increase the uncertainty in estimates of resource use. As long as this uncertainty is accounted for, δD may be a powerful tool for estimating resource use in food webs.     

Response properties and biological function of the skate electrosensory system during ontogeny

This study examined the response properties of skate electrosensory primary afferent neurons of pre-hatch embryo (8–11 weeks), post-hatch juvenile (1–8 months), and adult (>2 year) clearnose skates (Raja eglanteria) to determine whether encoding of electrosensory information changes with age, and if the electro-sense is adapted to encode natural bioelectric stimuli across life history stages. During ontogeny, electrosensory primary afferents increase resting discharge rate, spike regularity, and sensitivity at best frequency. Best frequency was at 1–2 Hz for embryos, showed an upwards shift to 5 Hz in juveniles, and a downward shift to 2–3 Hz in adults. Encapsulated embryos exhibit ventilatory movements that are interrupted by a “freeze response”” when presented with weak uniform fields at 0.5 and 1 Hz. This phasic electric stimulus contains spectral information found in potentials produced by natural fish predators, and therefore indicates that the embryo electrosense can efficiently mediate predator detection and avoidance. In contrast, reproductively active adult clearnose skates discharge their electric organs at rates near the peak frequency sensitivity of the adult electrosensory system, which; facilitates electric communication during social behavior. We suggest that life-history-dependent functions such as these may shape the evolution of the low-frequency response properties for the elasmobranch electrosensory system. Accepted: 19 February 1998     

Retina inversion and visual fiber crossing as neuroanatomical mirror transformation mechanisms

Visual fiber crossings and retina inversion are well studied neurophysiological phenomena in neuroanatomical but not in functional aspects. From analysis of literature data, the author has shown that the crossings and the inversion are the mirror transformation mechanisms, providing the shaping of such neuronal model (map, projection), with the coordinate axes directions on the perceiving side as nonmirror (and mirror on the giving side) to those of the original—the united visual field “face” and the “face” of its components, the visual fields. If these transformations were absent, the directions of the coordinate axes on the model perceiving side would be mirror to those of the original as in optical projection.     

“Camel nanoantibody” is an efficient tool for research,diagnostics and therapy

This short review provides an introduction to the rapidly developing field of generation and utilization of “camel nanoantibodies” (or “nanobodies”). The term “nanoantibody” or “nanobody” was given to single-domain variable fragments of special type of antibodies that naturally exist (in addition to classical types of antibodies) in blood of Camelidae family animals and in some chondrichthyan fishes. The existence of very efficient technology of nanobody generation and some very useful characteristic features promise a big potential for their use in immunobiotechnology and medicine.     

Measuring and quantifying dynamic visual signals in jumping spiders

Animals emit visual signals that involve simultaneous, sequential movements of appendages that unfold with varying dynamics in time and space. Algorithms have been recently reported (e.g. Peters et al. in Anim Behav 64:131–146, 2002) that enable quantitative characterization of movements as optical flow patterns. For decades, acoustical signals have been rendered by techniques that decompose sound into amplitude, time, and spectral components. Using an optic-flow algorithm we examined visual courtship behaviours of jumping spiders and depict their complex visual signals as “speed waveform”, “speed surface”, and “speed waterfall” plots analogous to acoustic waveforms, spectrograms, and waterfall plots, respectively. In addition, these “speed profiles” are compatible with analytical techniques developed for auditory analysis. Using examples from the jumping spider Habronattus pugillis we show that we can statistically differentiate displays of different “sky island” populations supporting previous work on diversification. We also examined visual displays from the jumping spider Habronattus dossenus and show that distinct seismic components of vibratory displays are produced concurrently with statistically distinct motion signals. Given that dynamic visual signals are common, from insects to birds to mammals, we propose that optical-flow algorithms and the analyses described here will be useful for many researchers.Damian O. Elias and Bruce R. Land contributed equallyAn erratum to this article can be found at     

Muscles within muscles: the neuromotor control of intra-muscular segments

The aim of this investigation was to anatomically identify, and then determine the function of, individual segments within the human deltoid muscle. The anatomical structure of the deltoid was determined through dissection and/or observation of the shoulder girdles of 11 male cadavers (aged 65–84 years). These results indicate that the deltoid consists of seven anatomical segments (D1–D7) based upon the distinctive arrangement of each segment's origin and insertion. Radiographic analysis of a cadaveric shoulder joint suggested that only the postero-medial segment D7 has a line of action directed below the shoulder joint's axis of rotation. The functional role of each individual segment was then determined utilising an electromyographic (EMG) technique. Seven miniature (1 mm active plate; 7 mm interelectrode distance) bipolar surface electrodes were positioned over the proximal portion of each segment's muscle belly in 18 male and female subjects (18–30 years). EMG waveforms were then recorded during the production of rapid isometric shoulder abduction and adduction force impulses with the shoulder joint in 40 degrees of abduction in the plane of the scapula. Each subject randomly performed 15 abduction and 15 adduction isometric force impulses following a short familiarisation period. All subjects received visual feed back on the duration and amplitude of each isometric force impulse produced via a visual force-time display which compared subject performance to a criterion force-time curve. Movement time was 400 ms (time-to-peak isometric force) at an intensity level of 50% maximal voluntary contraction. Temporal and intensity analyses of the EMG waveforms, as well as temporal analysis of the isometric force impulses, revealed the neuromotor control strategies utilised by the CNS to control the activity of each muscle segment. The results showed that segmental neuromotor control strategies differ across the breadth of the muscle and that individual segments of the deltoid can be identified as having either “prime mover”, “synergist”, “stabiliser” or “antagonist” functions; functional classifications normally associated with whole muscle function. Therefore, it was concluded that the CNS can “fine tune” the activity of at least six discrete segments within the human deltoid muscle to efficiently meet the demands of the imposed motor task. Accepted: 15 December 1997     

Terahertz vibrational properties of water nanoclusters relevant to biology

Water nanoclusters are shown from first-principles calculations to possess unique terahertz-frequency vibrational modes in the 1–6 THz range, corresponding to O–O–O “bending,” “squashing,” and “twisting” “surface” distortions of the clusters. The cluster molecular-orbital LUMOs are huge Rydberg-like “S,” “P,” “D,” and “F” orbitals that accept an extra electron via optical excitation, ionization, or electron donation from interacting biomolecules. Dynamic Jahn–Teller coupling of these “hydrated-electron” orbitals to the THz vibrations promotes such water clusters as vibronically active “structured water” essential to biomolecular function such as protein folding. In biological microtubules, confined water-cluster THz vibrations may induce their “quantum coherence” communicated by Jahn–Teller phonons via coupling of the THz electromagnetic field to the water clusters’ large electric dipole moments.     

A stochastic model for head lice infections

We investigate the dynamics of head lice infections in schools, by consideringa model for endemic infection based on a stochastic SIS (susceptible-infected-susceptible) epidemic model, with the addition of an external source of infection. We deduce a range of properties of our model, including the length of a single outbreak of infection. We use the stationary distribution of the number of infected individuals, in conjunction with data from a recent study carried out in Welsh schools on the prevalence of head lice infections, and employ maximum likelihood methods to obtain estimates of the model parameters. A complication is that, for each school, only a sample of the pupils was checked for infection. Our likelihood function takes account of the missing data by incorporating a hypergeometric sampling element. We arrive at estimates of the ratios of the “within school” and “external source” transmission rates to the recovery rate and use these to obtain estimates for various quantities of interest.      

Exploring Scientific Misconduct: Isolated Individuals,Impure Institutions,or an Inevitable Idiom of Modern Science?

This paper identifies three distinct narratives concerning scientific misconduct: a narrative of “individual impurity” promoted by those wishing to see science self-regulated; a narrative of “institutional impropriety” promoted by those seeking greater external control of science; and a narrative of “structural crisis” among those critiquing the entire process of research itself. The paper begins by assessing contemporary definitions and estimates of scientific misconduct. It emphasizes disagreements over such definitions and estimates as a way to tease out tension and controversy over competing visions of scientific research. It concludes by noting that each narrative suggests a different approach for resolving misconduct, and that the difference inherent in these views may help explain much of the discord concerning unethical behavior in the scientific community.     

Ionic mechanisms underlying tonic and phasic firing behaviors in retinal ganglion cells: A model study

In the retina, the firing behaviors that ganglion cells exhibit when exposed to light stimuli are very important due to the significant roles they play in encoding the visual information. However, the detailed mechanisms, especially the intrinsic properties that generate and modulate these firing behaviors is not completely clear yet. In this study, 2 typical firing behaviors—i.e., tonic and phasic activities, which are widely observed in retinal ganglion cells (RGCs)—are investigated. A modified computational model was developed to explore the possible ionic mechanisms that underlie the generation of these 2 firing patterns. Computational results indicate that the generation of tonic and phasic activities may be attributed to the collective actions of 2 kinds of adaptation currents, i.e., an inactivating sodium current and a delayed-rectifier potassium current. The concentration of magnesium ions has crucial but differential effects in the modulation of tonic and phasic firings, when the model neuron is driven by N-methyl-D-aspartate (NMDA) -type synaptic input instead of constant current injections. The proposed model has robust features that account for the ionic mechanisms underlying the tonic and phasic firing behaviors, and it may also be used as a good candidate for modeling some other firing patterns in RGCs.