NOTES ON SOME GRASSES. XVI. EMBRYO STRUCTURE OF THE GENUS ORYZA IN RELATION TO THE SYSTEMATICS

Three distinct types of embryo have been found in 18 species of the genus Oryza. Type 1 is characterized by lateral fusion of the epiblast and the scutellum and also by the development of auricles. Type 2 has no auricle, and the epiblast is not laterally fused with the scutellum. Type 3 has a cleft between the lower part of the scutellum and the coleorhiza, a long epiblast which is free from the scutellum, and lacks auricles. Type 1 has been found in 13 species of section Sativae, Type 2 in 4 species of sections Granulatae and Coarctatae, and Type 3 in O. coarctata only. The results indicate that species of section Sativae are more or less closely related, while section Coarctatae is a heterogeneous group. A new section, Ridleyianae, has been described for Oryza ridleyi and some other species. Oryza coarctata has unique features in embryo structure, morphology and leaf anatomy, and this species has been moved from the genus Oryza to a separate genus, Sclerophyllum, which is here revived.     

The systematics and biology of the Costa Rican species of parasitic wasps in the Thyreodon genus-group (Hymenoptera: Ichneumonidae)

This paper presents an eco‐taxonomic study of the Neotropical representatives of the Thyreodon genus‐group (Hymenoptera: Ichneumonidae) present in Costa Rica, i.e. species of the genera Thyreodon and Rhynchophion. These ichneumonids are koinobiont endoparasitoids of the larvae of Sphingidae and Saturniidae. Intensive sampling in Costa Rica, conducted over 15 years, has revealed the presence of 23 species (12 of which are described here as new –Rhynchophion woodi, Thyreodon woodleyi, T. papei, T. whitfieldi, T. deansi, T. walkerae, T. sharkeyi, T. zitaniae, T. delvarei, T. schauffi, T. darlingi and T. carmeani), whereas earlier studies recognized only nine species in the same area. Several of the additional species we found are simply very scarce and thus unlikely to be encountered except by the type of intensive survey that, in the tropics, has only been conducted in Costa Rica. In some other cases, it has become apparent that more than one species has previously been confused under a single name. Thyreodon rufothorax Cameron is shown to be morphologically and biologically distinct from T. atriventris (Cresson), with which it has long been synonymized, and the relatively well‐known, chromatically distinctive species ‘T. laticinctus Cresson’ and ‘T. morosus Smith’ are both shown to be complexes of sibling species. Reared series have been essential in facilitating the separation of the species in these complexes. An illustrated key is provided to separate all taxa using simple morphological characters. Fourteen of the 23 species have been reared, and all have been found to be restricted to one or a few species of hosts, species of Thyreodon primarily on macroglossine Sphingidae (with one species on Saturniidae) and species of Rhynchophion on sphingine sphingids of the genus Manduca. No two species of these ichneumonids attack the same host caterpillar species, and not all species of macroglossines present in the study area are attacked by species in this genus‐group. Most species are apparently rather rare. Many have only been collected by rearing on a few occasions, other species have been collected at light (six in total) or in Malaise traps (ten in total), or by hand‐netting (20 in total), but no one method collected all of the species present in the principal study area, the Area Conservacion de Guanacaste. The two New World genera Rhynchophion and Thyreodon are found to be related to the Old World genera Dictyonotus and Euryophion, the former of which comprises species that are also sphingid parasitoids, whereas species of the latter attack the caterpillars of other large bombycoid moths, Saturniidae and Eupterotidae. A cladistic analysis shows that Thyreodon is the sister‐lineage to Dictyonotus, and Euryophion is the most basal lineage in the genus‐group. © 2004 The Linnean Society of London, Zoological Journal of the Linnean Society, 2004, 141 , 297–351.     

Changes in fish species composition in Lake Naivasha,Kenya

The fish species composition in Lake Naivasha has been modified during recent years. Out of seven introduced and one indigenous species reported in 1962, only three introduced ones are found today. The elimination of species has been brought about by predation and changing ecological conditions. The most common fish species today is Sarotherodon leucosticuus. The hybridization found by previous workers between S. leucostictus x S. spilurus niger has stopped, as S. s. niger is no longer found in the lake. Most of the hybrid characters have been lost by the few surviving hybrids due to backcrossing between hybrids and between hybrids and S. leucostictus. The hybrids now mostly resemble S. leucostictus.     

A SYNOPSIS OF NORTH AMERICAN ASTERS: THE SUBGENERA,SECTIONS AND SUBSECTIONS OF ASTER AND LASALLEA

Traditional treatments of Aster were found unsatisfactory in predicting cytological and morphological characteristics of members of various subgenera, sections and subsections of different authors. A realignment of species into these infrageneric categories is presented and is based on sets of shared morphological characteristics of roots or rhizomes, leaves, and phyllaries. Eight subgenera are recognised in Aster. Subgenus Aster is divided into five sections on morphological characteristics: three have X = 9, one has X = 8 and one has X = 7. Subgenus Aster section Dumosi has been redefined and contains all the X = 8 species. Ten X = 5 species and one X = 4 species previously classified in up to six sections of subgenus Aster were found to be morphologically and cytologically related to each other, but unrelated to the other species of Aster. These eleven species have been assigned to the genus Lasallea sensu Semple & Brouillet. Lasallea has been divided in sections and subsections with new combinations presented in this paper.     

Taxonomic studies of Choanephoraceae in India

Summary A taxonomic study of the members of the family Choanephoraceae was undertaken. Almost all the species of the family have been isolated from various sources in India. Two genera, viz.,Blakeslea andChoanephora have been recognized and a key to the genera has been given. The genusBlakeslea includes only one speciesB. trispora and the genusChoanephora five species. A key to the species has also been given. A new variety ofChoanephora circinans, viz.,C. circinans var.prolifera Mehrotra andMehrotra based on the proliferating vesicular apices of the sporangiophores has been described.     

AMPHIDINIUM REVISITED. II. RESOLVING SPECIES BOUNDARIES IN THE AMPHIDINIUM OPERCULATUM SPECIES COMPLEX (DINOPHYCEAE), INCLUDING THE DESCRIPTIONS OF AMPHIDINIUM TRULLA SP. NOV. AND AMPHIDINIUM GIBBOSUM. COMB. NOV.1

Amphidinium operculatum Claparède et Lachmann, the type species of the dinoflagellate genus Amphidinium, has long had an uncertain identity. It has been considered to be either difficult to distinguish from other similar species or a morphologically variable species itself. This has led to the hypothesis that A. operculatum represents a “species complex.” Recently, the problem of distinguishing A. operculatum from similar species has become particularly acute, because several morphologically similar species have been found to produce bioactive compounds of potential interest to the pharmaceutical industry. In this study, we cultured and examined existing cultures of several species of Amphidinium, most of which have been previously identified as A. operculatum or as species considered by some to be synonyms or varieties of A. operculatum. Thirty strains were examined using comparative LM, SEM, and partial large subunit (LSU) rDNA sequence data. Through morphological and molecular phylogenetic analyses, six distinct species were identified, including Amphidinium trulla sp. nov. and Amphidinium gibbosum comb. nov. Amphidinium operculatum was redescribed based on four cultures. Genetic variability within the examined Amphidinium species varied greatly. There was little difference among strains in partial LSU rDNA for most species, but strains of A. carterae and A. massartii Biencheler differed by as much as 4%. In both A. carterae and A. massartii, three distinct genotypes based on partial LSU rDNA were found, but no morphological differences among strains could be observed using LM or SEM. In the case of A. carterae, no biogeographically related molecular differences were found.     

Accessing and exploiting genes of breeding value of distant relatives of crop Brassicas

The Brassicas are an important group of crops in India yielding edible oils and many vegetables. For improving cultivated Brassicas, the wild relatives are of considerable value. The Brassica group of seed oil and vegetables comprises six cultivated species, out of which three are diploids and three are digenomic tetraploids. Brassica juncea is the major seed oil crop in India which can be improved for several traits by incorporating genes from its distant relatives. The early work in India relating to genome manipulation consisted of synthesis of B. juncea by crossing B. campestris with B. nigra, experimental resynthesis of Brassica species and non-homologous pairing and genetic exchange at the interspecific level. The alloploid species B. napus and B. carinata have not been successful in India due to agrometereological limitations. However, synthetic forms of B. napus have been produced which have a desirable maturity period with good yield potential. Also, through non-homologous pairing, pod shatter resistant B. napus has been obtained, B. napus ordinarily suffers from pod shattering. Similarly, synthetic forms of B. carinata have been derived from reciprocal crosses between morphotypes of B. oleracea and B. nigra and also through protoplast fusion of B. nigra with B. oleracea. Molecular analysis has revealed that one of the somatic hybrids had a novel cytoplasmic combination which carried B. nigra mitochondrial and B. oleracea chloroplast genomes. A range of wild and weedy species related to crop Brassicas possess extensive genetic variability. Work for utilizing this variability included hybridization between wild and crop species, analysis of chromosome pairing and induction of alloploidy. Among Brassicas of interest to India, protoplast culture and regeneration has been successful in the case of B. oleracea, B. juncea, B. nigra and B. carinata (cultivated species) and Eruca sativa and Diplotaxis muralis (related wild species). Polyethylene glycol mediated protoplast fusion has been the most commonly used method in India for producing somatic hybrids involving Brassicas. The eight somatic hybrids produced and studied showed that in the majority of cases the fusions led to symmetric hybrids combining the complete genomes of the donor species. For developing suitable male sterile lines, B. juncea, B. campestris and B. napus nuclei have been combined with the cytoplasm of six wild species and stable male steriles have been developed. Protoplast fusion methodology has been used extensively for improving these CMS by manipulating cytoplasmic organelles, including production of new combinations of cp and mt.     

From Diploids to Allopolyploids: The Emergence of Efficient Pairing Control Genes in Plants

Polyploidy has played a major role in the evolution of higher plants. Precise control of chromosome pairing is vital for conferring meiotic regularity, and hence reproductive stability in allopolyploids. In this review, we examine whether strong evidence has accumulated for the presence and activity of pairing control genes in different allopolyploid species that are entirely bivalent forming and that display a strict disomic inheritance. We show that very good evidence has been adduced in Triticum species, Avena sativa, Festuca arundinacea, Brassica napus, Gossypium hirsutum, and G. barbadense, and in amphidiploids related to the diploid species Lolium perenne, L. multiflorum, and L. rigidum. More circumstantial evidence has been obtained for polyploids in the genera Aegilops, Hordeum, Nicotiana, and Coffea, which have received far less attention than the other species. Although these pairing regulators seem to control different processes operating throughout the premeiotic interphase and the meiotic prophase, little is known about their precise mode of action. We present three hypotheses that have been proposed to explain the origin and evolution of pairing control genes; none of them has been supported by direct evidence, and the origin of most pairing suppressors is still unknown. Accordingly, the study of pairing control genes is still an important task for understanding the stabilization and establishment of allopolyploid species.     

Identification of Prosopis juliflora and Prosopis pallida Accessions Using Molecular Markers

There has been much taxonomic confusion over the identification of Prosopis species, especially where introduced. Prosopis juliflora is the most widespread species in the arid and semi-arid tropics, although it has been confused with other species, particularly the closely related Prosopis pallida. In this study, RAPDs markers were used for the first time to distinguish between these species. Eighteen primers were used in amplification reactions, which yielded an average of 120 bands per accession. A dendrogram showing genetic similarities among accessions was constructed using UPGMA cluster analysis and the Nei and Li similarity coefficient. The genetic similarity observed between P. juliflora and P. pallida is similar to the value in sympatric Prosopis species in North America, and reconsideration of the series rank in section Algarobia is suggested. Species-specific markers confirmed that material in Burkina Faso is P. juliflora, but suggested that material collected in Brazil, Cape Verde and Senegal is P. pallida, whereas this has previously been identified as P. juliflora.     

Coccidia of the Leporidae*

Thirty-six species of coccidia, all members of the genus Eimeria, have been described from 3 of the 9 genera and 11 of the more than 48 species in the lagomorph family Leporidae. All these are described briefly in the present paper and their synonymies are given. Coccidia have been described from the single species of Oryctolagus, from 4 of the 13 species of Sylvilagus and from 6 of the 26 species of Lepus. These genera have 12, 12, and 14 known species of Eimeria, of which only 2 are shared by Oryctolagus and Sylvilagus. Lepus has none of the coccidia of these genera. One species is known to occur in the bile ducts of the liver, 13 in the intestine, and the location of 22 is unknown. Life cycles have been determined for 9 of the species, of which 8 have been worked out in the domestic rabbit Oryctolagus and 1 in the cottontail Sylvilagus.     

Oligoneuria Pictet: phylogenetic analysis and description of three new species from Brazil (Ephemeroptera: Oligoneuriidae)

For 150 years O. anomala has been the only known species of Oligoneuria, the type genus of the Oligoneuriidae (Ephemeroptera). However, two species have been recently described and Oligoneuria has been proposed as a senior synonym of the genus Oligoneurioides. In the present paper, based on material from the Amazon and Brazilian Atlantic Forest, three new species are described, including information on all life stages. Given these new species, as well as the lack of cladistic support for the proposed synonymy between Oligoneuria and Oligoneurioides, a phylogenetic analysis was performed in order to address the relationships between all species and to test the status of Oligoneurioides. Our results show that the status of the genus is uncertain, mainly due to the lack of knowledge of the type species of O. anomala, known exclusively from a female subimago. Taking into account phylogenetic as well as taxonomic arguments, we propose that the genus Oligoneuria should be divided into three subgenera: Oligoneuria s.s., for O. anomala; Oligoneuria (Yawari) new subgenus, for Oligoneuria truncata sp.n. ; and Oligoneuria (Oligoneurioides) for the remaining five species, including O. amandae sp.n. and O. mitra sp.n. This published work has been registered in ZooBank, http://zoobank.org/urn:lsid:zoobank.org:pub:A2AEE4B7‐FEA8‐4067‐8F3B‐666095EDB997 .     

Chrysophyceae from freshwater localities near Nijmegen,The Netherlands

Scale-bearing Chrysophytes from nine freshwater bodies in the surroundings of Nijmegen, The Netherlands, have been studied using both scanning and transmission electron microscope.A comparison has been made with a previous study in the northern part of The Netherlands by Wujek & van der Veer (1976).This paper deals with three species of Mallomonopsis, twenty-one species and one variety of Mallomonas, four species and three formae of Synura, one species of Chrysosphaerella, two species of Spiniferomonas and three species and one form of Paraphysomonas. One species of Mallomonopsis, twelve species of Mallomonas, one form of Synura, Chrysosphaerella brevispina and one species and one form of Paraphysomonas are for the first time recorded from The Netherlands. One species of Mallomonopsis and one species of Spiniferomonas could not be identified.Some physical and chemical data of the sampling localities are given.     

Evolution of the transposable element Uhu in five species of Hawaiian Drosophila

The complete DNA sequence of three independent isolates of Uhu, a member of the Tc1-like class of transposable elements from D. heteroneura (Uhu-1, Uhu-3, and Uhu-4), has been determined. These isolates have between 95 and 96.4% nucleotide sequence identity indicating that Uhu is well conserved within this species. A comparison of the DNA sequences of Uhu and the D. melanogaster Hb1 transposable element shows that the nucleotide substitution rate for Uhu is comparable to the synonymous rate for the Adh gene in these species. Uhu has been identified in four other species of endemic Hawaiian Drosophila, D. silvestris, D. differens, D. planitibia and D. picticornis, and nine Uhu elements were isolated from genomic libraries of these four species. A 444 base pair region from within the coding region of the Uhu element, with well conserved ends, was amplified by the polymerase chain reaction and used for sequence comparison of elements from different species. The analysis of the sequence similarities between the elements within and between the species shows a grouping of the two pairs of most closely related species (D. heteroneura and D. silvestris, and D. differens and D. planitibia), but shows a much larger variation within the most recently diverged species (D. heteroneura and D. silvestris) than expected. There are extensive nucleotide substitutions and deletions in the Uhu elements from D. picticornis showing that they are degenerating and being lost in this species. These observations indicate that the Uhu element has been transmitted vertically and that transposition may have been activated at the time of formation of each species as it colonized the newly formed islands of the Hawaiian archipelago.     

Typification and status of Amphiroa cryptarthrodia Zanardini (Lithophylloideae,Corallinales, Rhodophyta)

The status of the name Amphiroa cryptarthrodia Zanardini has been uncertain, and there has been a lack of stability in this species nomenclature, in part related to its poor taxonomic foundation. The species has been considered conspecific with Amphiroa verrucosa Kützing nom. illeg. Another suggested taxonomic synonym has been Amphiroa rubra (Philippi) Woelkering. A type specimen for A. cryptarthrodia appears never to have been designated and there are no illustrations of Zanardini's original collections housed in the Museo Civico di Storia Naturale, Venezia (MCVE). In the present paper, a neotype of A. cryptarthrodia is designated, based on the study of Zanardini's authentic collections. A detailed morphological and anatomical account of the type specimen is provided and the diagnostic characters of the species are listed. Nomenclatural and taxonomic data and brief considerations of the relationships between A. cryptarthrodia and conspecific species are also provided. It is concluded that A. verrucosa Kützing is a heterotypic synonym. The name A. rubra (Philippi) Woelkerling should remain, pertaining solely to its type pending new investigations.     

High tolerance to abiotic stressors and invasion success of the slow growing freshwater snail, Melanoides tuberculatus

Considerable research has been conducted to determine traits common to invasive species with the goal of predicting, preventing, or managing invasions. The importance of physiological tolerance to abiotic stressors in the ability of invasive species to establish and displace native species has been hypothesized to be important although there are few actual tests of the hypothesis in the literature. In freshwater molluscs it has been suggested that high fecundity is the most important trait for invasion success and that physiological tolerance to abiotic conditions is unlikely to play a significant role. We examined the tolerance to abiotic stressors using a known invasive snail species (Melanoides tuberculatus) that has a much slower growth rate and fecundity than a native species it has displaced (Biomphalaria glabrata). We tested the hypothesis that M. tuberculatus would have significantly greater tolerance to natural and anthropogenic abiotic stressors (cadmium, malathion, temperature extremes, and desiccation) which may provide a mechanism for displacement of B. glabrata. A time-to-event analysis was used to determine relative tolerance between species. M. tuberculatus was significantly more tolerant to the tested abiotic stressors than B. glabrata with the exception of low temperature (5°C). Stress tolerance may partly explain the ability of M. tuberculatus to displace B. glabrata despite having a much lower growth rate and fecundity. These results also suggest that M. tuberculatus is likely to have a strong advantage in disturbed or polluted habitats. Identifying those traits most important for the invasion success of particular species could be used to better inform removal strategies and may allow for improved predictions of invasion potential.     

Morphological and molecular analysis of centropagids from the high Andean plateau (Copepoda: Calanoidea)

In small metazoan invertebrates classical taxonomic analyses can be ambiguous due to the limited number of morphological characters available. This difficulty can yield incorrect estimates of species richness or taxa distribution. The Boeckella genus has been described as the dominant taxon of zooplankton assemblages in the Andean biogeographical region. In this genus, taxonomic classification and delimitation of boundaries between species has long been problematic and controversial. Among South American centropagids Boeckella gracilipes has been regarded as one of the most broadly distributed species, its presence having been reported from Ecuador to Tierra del Fuego. However, in the high Andean plateau some centropagid populations identified as Boeckella gracilipes have also been considered as B. gracilipes titicacae or even identified as a different species, namely Boeckella titicacae. In an attempt to resolve the taxonomic status of the Centropagidae family from the high Andean plateau, we combined traditional and multivariate morphological analyses (integral approach) with the molecular phylogenetic approach. The results obtained allow us to conclude that centropagids collected from the high Andean plateau actually represent a different species, B. titicacae, not B. gracilipes. The phylogenetic reconstruction of the South American Centropagidae family indicated that B. gracilipes represents a sister taxon to B. titicacae. The present study stresses the usefulness of integrating alfa-taxonomy with morphometric and molecular approaches in order to resolve species boundaries, to determine geographical distributions and to investigate evolutionary processes.     

The tangled core at the heart of the bryozoan suborder Phylloporinina

Abstract: The family Phylloporinidae was introduced in the late 19th century to accommodate a small number of Palaeozoic bryozoan genera characterized by irregularly fenestrated colonies generated by anastomosis of unilaminate branches. Among the first named of these genera were Chasmatopora Eichwald, 1855 and Phylloporina Ulrich in Foerste, 1887. The two names have been variously in fashion, and there has been confusion about whether they are subjective synonyms or are distinct genera. This taxonomic confusion has been due in large part to whether the single species (Retepora angulata Hall, 1847) assigned to Phylloporina in Foerste (1887) or the species that Ulrich intended (Retepora trentonensis Nicholson, 1875) is the type species and also because of lack of sufficient information about Foerste’s material to characterize it well. We here redescribe the pertinent species, erect the new species Chasmatopora foerstei for the species that Foerste incorrectly assigned to Phylloporina angulata (Hall), and suggest that Retepora trentonensis Nicholson be retained as type species of Phylloporina based on prevailing usage, until the issue is settled by the International Commission on Zoological Nomenclature.     

Keystone status of plateau pikas (Ochotona curzoniae): effect of control on biodiversity of native birds

The plateau pika (Ochotona curzoniae) of the Qinghai–Xizang (Tibetan) plateau, People's Republic of China, has been considered a pest because it putatively competes with native livestock for forage and contributes to rangeland degradation. As a result the plateau pika has been poisoned across vast areas of the high alpine meadows of the plateau. The plateau pika has also been considered a keystone species for biodiversity on the plateau. As one test of the keystone species hypothesis, we investigated the effects of poisoning plateau pikas on avian species richness and abundance. We conducted standardized censuses of birds on a number of sites across the alpine grassland of Qinghai province on which pikas either had or had not been poisoned. Avian species richness and abundance were higher on non-poisoned sites, in particular for species that nest in pika burrows such as Hume's groundpecker (Pseudopodoces humilis) and six species of snowfinch (Montifringilla spp., Pyrgilauda spp.), and species that prey on pikas (upland buzzard, Buteo hemilasius; black-eared kite, Milvus lineatus). The plateau pika thus appears to be both an allogenic engineer and a keystone species. Poisoning pikas reduces biodiversity of native species on the Qinghai–Xizang plateau, therefore management decisions concerning plateau pikas should reflect caution and careful assessment.