草鱼和鲤群体遗传变异的RAPD指纹分析

利用随机扩增多态ＤＮＡ技术对革鱼,兴国红鲤,野鲤的种群内,种群间以及种间的遗传变异亏待进行了定量分析。结果表明;草鱼与鲤的ＲＡＰＤ指纹图谱带型差异显著,草鱼与红鲤和鲤种间的平均带纹相似系数分别为０．２５８３和０．２３９４,遗传距离分别达到０．９３６２和１．２２７７。     

三种鲫鱼品系同工酶比较研究

采用聚丙烯酰胺凝胶垂直板电泳技术,对彭泽鲫、银鲫D系以及野鲫三种鲫鱼品系的心、肝和肾脏组织的乳酸脱氢酶(LDH)、苹果酸脱氢酶(MDH)、苹果酸酶(ME)、酯酶(EST)和超氧化物歧化酶(SOD)同工酶表型进行了比较研究.结果表明彭泽鲫乳酸脱氢酶同工酶比银鲫D系在肝组织多出二条酶带(LDH7'和LDH8');超氧化物歧化酶在心和肾组织中分别多出一条酶带(SOD12'),表明彭泽鲫和银鲫已在生化水平产生明显的分化,推测它们可能起源于不同的地区,由不同的祖先,独立演化而形成.此外,彭泽鲫和银鲫D系的同工酶电泳图谱都包含野鲫的基本酶带,而彭泽鲫和野鲫的酯酶同工酶电泳图谱尤为相似,推测彭泽鲫和银鲫可能起源于野鲫,而彭泽鲫和野鲫的关系较近,银鲫和野鲫的关系较远.     

Genetic variation analysis within and among six varieties of common carp (Cyprinus carpio L.) in China using microsatellite markers

Five microsatellites were used to study the genetic diversity and genetic structure of one wild and five domestic varieties of common carp in China (the Yangtze River wild common carp, Xingguo red carp, purse red carp, Qingtian carp, Russian scattered scaled mirror carp and Japanese decorative carp). All loci in this study showed marked polymorphism with the number of alleles from 4 to 13. Domestic varieties (except Xingguo red carp) showed less genetic diversity than the Yangtze River wild common carp in terms of allelic diversity. Population differentiation was assessed and each combination of populations displayed significant differentiation (p < 0.05) with the exception of that between the Yangtze River wild common carp and Xingguo red carp. Genetic distance analysis (Nei's standard genetic distance and pairwise F(st) distance) showed that the largest distance was between Russian scattered scaled mirror carp and the Yangtze River wild common carp and the smallest distance was between the Yangtze River wild common carp and Xingguo red carp. However, among six populations Japanese decorative carp displayed the highest level of variability in terms of heterozygosity.     

Structural conservation and food habit-related liver expression of uncoupling protein 2 gene in five major Chinese carps

The full-length cDNA of grass carp (Ctenopharyngodon idellus) and silver carp (Hypophthalmichthys molitrix) uncoupling protein 2 (UCP2) was obtained from liver. The grass carp UCP2 cDNA was determined to be 1152 bp in length with an open reading frame that encodes 310 amino acids. Five introns (Intron 3, 4, 5, 6 and 7) in the translated region, and partial sequence of Intron 2 in the untranslated region of grass carp UCP2 gene were also obtained. Gene structure comparison between grass carp and mammalian (human and mouse) UCP2 gene shows that, the UCP2 gene structure of grass carp is much similar to that of human and mouse. Partial UCP2 cDNA sequences of bighead carp (Aristichthys nobilis) and mud carp (Cirrhinus molitorella), were further determined. Together with the common carp (Cyprinus carpio) UCP2 sequence from GenBank (AJ243486), multiple alignment result shows that the nucleotide and amino acid sequences of the UCP2 gene, were highly conserved among the five major Chinese carps that belong to four subfamilies. Using beta-actin as control, the ratio UCP2/beta-actin mRNA (%) was determined to be 149.4 +/- 15.6 (common carp), 127.4 +/- 22.1(mud carp), 96.7 +/- 12.7 (silver carp), 94.1 +/- 26.8 (bighead carp) and 63.7 +/- 16.2 (grass carp). The relative liver UCP2 expression of the five major Chinese carps, shows a close relationship with their food habit: benthos and detritus-eating fish (common carp and mud carp) > planktivorious fish (silver carp and bighead carp) > herbivorous fish (grass carp). We suggest that liver UCP2 might be important for Chinese carps to detoxify cyanotoxins and bacteria in debris and plankton food.     

长江中下游鲢鳙草青四大家鱼线粒体DNA多样性分析

对长江中、下游湖北石首、江西九江、安徽芜湖三江段鲢、鳙、草鱼、青鱼天然群体共３６５尾鱼的线粒体ＤＮＡ（ｍｔＤＮＡ）的ＮＤ５／６、Ｃｙｔｂ基因和Ｄ－Ｌｏｏｐ区片段进行了限制性内切酶酶切片段长度多态（ＲＦＬＰ）分析。结果表明：（１）长江中、下游鲢、鳙和青鱼的遗传多样性丰富，草鱼不甚丰富。发现鲢、鳙和青鱼的ｍｔＤＮＡ基因型分别有２８、１９、２７种，草鱼ｍｔＤＮＡ基因型仅见７种；鲢、鳙和青鱼的基因型多样性     

Genetic Variation Analysis within and among Six Varieties of Common Carp (Cyprinus carpio L.) in China Using Microsatellite Markers

Five microsatellites were used to study the genetic diversity and genetic structure of one wild and five domestic varieties of common carp in China (the Yangtze River wild common carp, Xingguo red carp, purse red carp, Qingtian carp, Russian scattered scaled mirror carp and Japanese decorative carp). All loci in this study showed marked polymorphism with the number of alleles ranging from 4 to 13. Domestic varieties (except Xingguo red carp) showed less genetic diversity than the Yangtze River wild common carp in terms of allelic diversity. Population differentiation was assessed and each combination of populations displayed significant differentiation (P < 0.05) with the exception of that between the Yangtze River wild common carp and Xingguo red carp. Genetic distance analysis (Nei's standard genetic distance and pairwise F _st distance) showed that the largest distance was between Russian scattered scaled mirror carp and the Yangtze River wild common carp and the smallest distance was between the Yangtze River wild common carp and Xingguo red carp. However, among six populations Japanese decorative carp displayed the highest level of variability in terms of heterozygosity.     

几种鲤鲫鳞片色素细胞和体色发生的观察

通过普通鲫、红鲫、水晶彩鲫、普通鲤、蓝鲤、荷包红鲤和锦鲤的不同色彩鳞片色素细胞和体色发生过程观察,确定组成鳞片的色素细胞有4种:红色素、黄色素、黑色素和鸟粪素细胞,分布在鳞片的上层和下层,由于组合不同、大小不同和形状不同,就形成了多种多样的不同体色。本研究描述了不同品种鲤、鲫鱼从出苗到体色形成的发生过程,总结和归纳了不同时期体色变化的异同点,以期为鱼类的体色研究提供理论依据。     

草鱼出血病病毒对其它鱼的感染性研究

用草鱼出血病病鱼分离出的草鱼出血病病毒(Grass carp hemorrhage virus,GCHV)感染其它常见鱼并用ELISA方法检查感染鱼组织提取液,结果表明:青鱼、鲢鱼、布氏鳌条对GCHV抗体呈阳性反应;鲤鱼、鳙鱼、鲫鱼、团头鲂、泥鳅则呈阴性反应。综合感染鱼发病症状及死亡特征,初步认为:青鱼对GCHV是易感的,GCHV能在鲢鱼、布氏蟹条体内增值,但毒力较低,鳙鱼、鲫鱼、团头鲂、鲤鱼、泥鳅能抗GCHV感染。     

银鲫复合种外源遗传物质整入的RAPD分析

在优化ＲＡＤＰＤ检测条件的基础上,采用４０对随机引物,比较分析了银复合物,异育银鲫和兴国红鲤相互间扩增ＤＮＡ片段的异同性。总的来说,银鲫复合种和异育银鲫具有基本一致的扩增产物,而与兴国红鲤的扩增产物多数不同,相似率分析表明,银鲫复合种与兴国红鲤之间的相似率为３１．６％,异育银鲫与兴国红鲤之间的相似率为２８．６％。在分析中,除发现银鲫复合种,异育银鲫与兴国红鲤间共有扩增片段外,还发现了银鲫复合种与兴     

异源四倍体鲫鲤、三倍体湘云鲫和它们父母本线粒体DNA 12S rRNA基因遗传变异的分析

采用质粒克隆测序方法,获得了异源四倍体鲫鲤5个个体、异源四倍体鲫鲤雌核发育二倍体后代2个个体、三倍体湘云鲫2个个体及红鲫、湘江野鲤和日本白鲫各1个个体的线粒体DNA 12S rRNA基因的全序列。经对比发现,异源四倍体5个个体共享2种单元型,异源四倍体鲫鲤雌核发育二倍体后代2个个体、三倍体湘云鲫2个个体以及红鲫、湘江野鲤和日本白鲫各1个个体分别共享1种单元型。用MEGA 1.0 软件分析了它们的碱基组成和核苷酸序列差异,用邻接法构建系统进化树。它们间的序列同源性在95%~99%之间,异源四倍体鲫鲤、三倍体湘云鲫和它们母本（分别为红鲫和日本白鲫）之间的序列同源性大于异源四倍体鲫鲤、三倍体湘云鲫和它们父本（分别为湘江野鲤和异源四倍体鲫鲤）之间的序列同源性,结果表明：异源四倍体鲫鲤和三倍体湘云鲫在线粒体DNA 12S rRNA基因上具有母性遗传特征。本研究另一值得注意地方的是异源四倍体鲫鲤经过9代(F3-F11)繁殖后,在5个个体中发现了2种单元型,说明在四倍体基因库中存在遗传多样性,为四倍体基因库的繁殖、保护和种群复壮提供了一些有价值的信息。     

一个锂品种线粒体基因片段序列保守性

在红锂、镜锂和野锂中进行线粒体１６rRNA和Ｃytb基因片段的序列测定。结果发现,３个鲤品种在多达８５９个碱基长度上无变异,但是与已报道的鲤全序列中的同源序列则有约１．５％的趋异。这个结果提示３个鲤品种可能在起源中是独立的一支。并且分化极低。     

草鱼和鲤杂交的细胞学研究—鱼类远缘杂交核质不同步现象

以草鱼(Ctenopharyngodon idellus)为母本、鲤(Cyprinus carpio)为父本进行人工杂交,杂种胚胎发育至孵化期全部死亡;同时获得了少数雌核发育草鱼和雄核发育的鲤。分析比较了草鲤杂种胚胎染色体变化及胚胎发育情况。发现杂种胚胎染色体数目变化较大,一般在24—73之间,绝大部分细胞染色体在发育过程中不断丢失而出现非整倍体;极少数细胞在受精后雌性原核和雄性原核不结合而引起雌核发育和雄核发育;草鱼和鲤胚胎发育时序有较大差别;因此细胞分裂不能同步。可能是杂种胚胎染色体不断丢失的主要原因。     

传统稻鱼系统中“田鲤鱼”的形态特征

稻田养鱼是一种重要的传统农业系统,养殖在稻田中的鲤鱼,在长期的自然选择和人工选择下逐渐形成了适应于稻田浅水环境的“田鲤鱼”.本研究以具有千年历史的全球重要农业文化遗产系统“青田稻鱼共生系统”和“从江稻鱼鸭系统”的青田田鱼和从江田鱼为范例,通过采样对两种“田鲤鱼”进行传统形态学分析和地标几何形态学分析;采用线粒体基因构建系统发育树;通过数据库数据提取和采样测量对两种“田鲤鱼”和其他常见鲤鱼种群或品系进行传统形态学聚类分析.传统形态学分析和地标几何形态学分析表明,青田田鱼和从江田鱼在形态上存在差异,与青田田鱼相比,从江田鱼尾部长而窄,体型较细长,尾部长度占身体长度比例小.对这两种田鱼及养殖于其他水体的其他鲤鱼种群进行系统发育树分析表明,青田田鱼和从江田鱼在遗传上是独立的种群;但形态聚类分析表明,这两种田鱼归为一类,明显不同于其他鲤鱼种群或品系,与其他鲤鱼种群的差异主要表现在背鳍和尾鳍上.这些研究结果说明,长期生活在稻田环境的青田田鱼和从江田鱼在遗传和形态上均明显不同于其他水体养殖鲤鱼种群,且青田田鱼和从江田鱼之间形态上存在差异.     

Morphology of androgenetic and gynogenetic grass carp, Ctenopharyngodon idella (Valenciennes)

Crosses between female carp x male grass carp resulted in androgenetic grass carp and hybrids. Fertilizing grass carp eggs with carp milt that had been irradiated with ultraviolet light for 15 min at 1.0 mW/cm² produced gynogenetic grass carp. We compared the morphology of experimental progeny with that of the parental species to determine if inheritance was strictly matroclinous in gynogenesis and strictly patroclinous in andro-genesis. Dorsal and anal fin rays, lateral line scales, gill rakers, pharyngeal teeth, and the relative length of the dorsal fin all suggested that gynogenetic grass carp were identical with the maternal species and androgenetic grass carp with the paternal species. Hybrids were intermediate between the parents except that the number of anal rays was identical with that in carp. The number of dorsal rays, the body depth, and the pharyngeal teeth in hybrids were more like those in carp than in grass carp, whereas the number of gill rakers was more similar to that in the paternal species.     

Polymorphism of the cytochrome oxidase b gene (cyt b) in Russian populations of common carp and wild common carp (Cyprinus carpio L.)

Polymorphism of the mitochondrial cyt b gene was examined in 35 individuals of common carp and wild common carp (Cyprinus carpio L.). The fish examined represented two natural populations from Khabarovsk krai (Ac and Am), Volga wild common carp, Don wild common carp, and two common carp breeds, Ropsha (strains BB and MM) common carp and Hungarian common carp. The highest level of nucleotide (pi) and haplotype (h) diversity was detected in two strains of Ropsha common carp (MM, pi = 0.67%, h = 0.7; and BB, pi = 0.21%, h = 0.9) and in one population (Am) of Amur wild common carp (pi = 0.26%; h = 0.6). The second population of Amur wild common carp (Ac) and Hungarian common carp were characterized by lower variation estimates (pi = 0.035%, h = 0.4; and pi = 0.09%, h = 0.7, respectively). Genetic homogeneity was demonstrated for the populations of Volga and Don wild common carp (pi = 0, h = 0). In the sample of the cyt b sequences examined, three lineages were identified. Lineages I and II united all haplotypes of the Am Amur wild common carp along with two haplotypes of Ropsha common carp, strain MM. The third lineage (III) was formed by the haplotypes of three individuals of Ropsha common carp strain MM, all representatives of Ropsha common carp strain BB, Hungarian common carp, Ac Amur wild common carp, and Don and Volga wild common carps. Statistically significant amino acid differences were observed only for the sequences, corresponding to haplotypes of lineage III, and the sum of sequences of lineages I and II. Effectiveness of different types of markers to differentiate the two subspecies of European and Amur wild common carp (C. c. carpio and C. c. haematopterus) is discussed, as well as the issues of the origin and dispersal of Russian common carp and wild common carp breeds.     

池塘循环水养殖对混养草鱼食用品质的影响

为探究养殖模式对草鱼(Ctenopharyngodon idellus)鱼肉品质的影响,实验对两种养殖模式下(传统池塘养殖和池塘循环水养殖)草鱼的食用品质进行了差异比较。结果表明,循环水养殖草鱼肌肉白度和弹性高于传统池塘养殖的草鱼,且其不饱和脂肪酸和必需氨基酸含量均显著高于传统池塘养殖;其中, n-3和n-6系列不饱和脂肪酸含量显著高于传统池塘养殖草鱼,是其1.2倍,使得草鱼的肌肉品质和营养品质更佳。此外,循环水养殖可降低草鱼中带有土腥味和青草味的己醛、庚醛和1-辛烯-3-醇等物质的含量,且鲜味核苷酸(IMP)含量高于传统池塘养殖草鱼,使得草鱼的风味更鲜美、浓厚。研究表明,循环水养殖草鱼的肌肉品质和营养特性均优于传统池塘养殖。     

从ATPase8-6基因研究杂交多倍体鱼线粒体母性遗传

异源四倍体鲫鲤是世界上首例人工培育的两性可育并形成群体的且能自然繁殖的四倍体鱼。本文采用质粒克隆测序法测定了红鲫、异源四倍体鲫鲤、三倍体湘云鲫和三倍体湘云鲤的ATPase8和ATPase6基因全序列 ,结合鲤鱼、日本白鲫和斑马鱼的同源序列 ,对不同倍性水平鲤科鱼类的ATPase8和ATPase6基因进行了比较 ,分析了碱基组成、变异情况以及核苷酸和氨基酸序列差异。红鲫、鲤鱼、异源四倍体鲫鲤、日本白鲫、三倍体湘云鲫和三倍体湘云鲤之间的序列差异为 0 0 % - 1 3 4 % ,它们与外群斑马鱼之间的序列差异为 2 7 9% -31 0 %。用MEGA软件中的MP法、ME法、NJ法和UPGMA法构建分子系统树 ,得到了相似的拓扑结构。结果分析表明 ,人工杂交多倍体异源四倍体鲫鲤、三倍体湘云鲫和三倍体湘云鲤在线粒体ATPase8和ATPase6基因上具有严格的母性遗传特征。值得注意的是 ,异源四倍体鲫鲤经过 1 1代的繁育后 ,与其原始母本红鲫仍然保持了非常高的同源性 ,说明了新的异源四倍体基因库在线粒体ATPase8和ATPase6基因上拥有稳定的遗传特性。对不同倍性鲤科鱼类线粒体ATPase8和ATPase6基因的研究表明 ,ATPase8和ATPase6基因是杂交鱼后代遗传变异研究的一个很好的分子标记     

Comparative and Evolutionary Analysis of the Cytochrome b Sequences in Cyprinids with Different Ploidy Levels Derived from Crosses

The mitochondrial cyt b genes in the allotetraploid and triploid crucian carp as well as triploid common carp were isolated and completely sequenced. Their DNA sequences were compared with those derived from the cyt b genes of the red crucian carp, Japanese crucian carp, and common carp with MEGA 1.0 software. Phylogenetic analysis revealed the sister relationships between allotetraploid and diploid red crucian carp, between the triploid crucian carp and diploid Japanese crucian carp, and between triploid common carp and diploid common carp. Our results indicated the cyt b genes in the allotetraploid, triploid crucian carp, and triploid common carp were maternally inherited. Through maternal inheritance, the cyt b gene in the F11 tetraploid displayed extremely high similarity to that in the female parent red crucian carp after 11 generations (from F1 to F11 hybrids). Since the establishment of the new tetraploid stocks has great significance in analyzing evolutionary theory of vertebrate and in improving aquaculture industry, analysis of the cyt b gene and the elucidation of the variation of the cyt b gene DNA in different cyprinids prove that cyt b is a useful genetic marker to monitor the variations in the progeny of the crosses.     

草鱼雌核发育后代不同群体的微卫星遗传分析及指纹识别

以紫外线灭活的团头鲂精子激活草鱼卵子,冷休克抑制第二极体排出的方法诱导出长江水系优良F2代草鱼减数雌核发育子代。在后代中不仅存在雌核发育后代,还存在草鲂杂交后代,雌核发育后代的体型与草鱼一致,而草鲂杂交后代的体型介于草鱼与团头鲂之间。Partec CyFlow倍性分析仪测定结果显示:普通草鱼与雌核发育草鱼的相对DNA含量分别为23.01和22.72,二者的DNA含量接近;而高体型子代的相对DNA含量为25.38,介于草鱼与团头鲂（DNA含量28.21）之间,属于草鲂杂交后代。选取17个微卫星标记对草鱼群体、雌核发育草鱼群体和草鲂杂交后代的遗传多样性进行了检测,共检测出59个等位基因,其中43.18个有效等位基因。草鱼对照群体、草鲂杂交后代和雌核发育草鱼群体的平均等位基因依次为3.57、2.86和2.79,平均有效等位基因依次为2.93、2.37和1.96,平均期望杂合度在依次为0.6502、0.5573和0.3775,多态信息含量（PIC）平均值依次为0.5738、0.4649和0.3791。与草鱼对照群体相比,雌核发育草鱼群体的遗传多样性显著下降,表明通过减数雌核发育方法可获得纯合性较高的草鱼个体。构建了草鱼后代不同群体的DNA指纹模式图,筛选到不同群体的9个特异微卫星标记,为草鱼优良群体的选育提供了基础资料。     

Polymorphism of microsatellite markers in Russian common carp (<Emphasis Type="Italic">Cyprinus carpio</Emphasis> L.) breeds

Using five microsatellite loci, genotyping and genetic diversity estimates were obtained for nine samples representing seven common carp breeds most widespread in Russia. For comparison, the samples of Amur wild common carp (Cyprinus carpio haematopterus) and a sample of European Hungarian carp were used. In the samples examined (n = 148) a total of 78 alleles were revealed. The highest mean allele number per locus (7.3) was identified in Amur wild common carp, while the lowest number was found in Cherepets carps (4.0). In different breeds, the observed heterozygosities varied from 0.819 (Altai carp) to 0.651 (Cherepets scaly carp). Three out of five microsatellite loci (MFW-24, MFW-28, and MFW-19) revealed a high level of population differentiation. In the dendrogram of genetic differences, all breeds clustered into two groups. One of these groups was composed of the two strains of Ropsha carp, Stavropol carp, Amur wild common carp, and the two samples of Cherepets carp. The second cluster included Altai carp (Priobskii and Chumysh populations), two Angelinskii carp breeds (mirror and scaly), and Hungarian carp. The pairs of breeds/populations/strains, having common origin, were differentiated. Specifically, these were two populations of Altai carp, two strains of Ropsha carp, as well as the breeds of Angelinskii and Cherepets carps. The reasons for genetic differentiation of Russian common carp breeds, as well as the concordance of the evolutionary histories of these breeds, some of which originated from the European breeds, while the others contain substantial admixture of the Amur wild common carp, are discussed.