Identification and expression analysis of cold-regulated genes from the cold-hardy Citrus relative Poncirus trifoliata (L.) Raf.

Citrus is a cold-sensitive genus and most commercially important varieties of citrus are susceptible to freezes. On the other hand, Poncirus trifoliata (L.) Raf. is an interfertile Citrus relative that can tolerate temperatures as low as −26°C when fully cold acclimated. Therefore, it has been used for improving cold tolerance in cold-sensitive commercial citrus rootstock varieties and in attempts to improve scion varieties. In this study, cDNA libraries were constructed from both 2-day cold-acclimated and from non-acclimated Poncirus seedlings using a subtractive hybridization method with the objective of identifying cold-regulated genes. A total of 192 randomly picked clones, 136 from the cold-induced library and 56 from the cold-repressed library, were sequenced. The majority of these clones showed sequence homology to previously identified cold-induced and/or environmental stress-regulated genes in Arabidopsis. In addition, some of them shared homology with cold and/or environmental stress-induced genes previously identified in other herbaceous and woody perennial plants and some showed no homology with sequences in GenBank. When these 192 cDNAs were analyzed by reverse northern blot with cold-acclimated and non-acclimated probes, 92 of the cDNAs displayed significantly increased expression, ranging from 2 to 49-fold, during cold acclimation; all 92 were from the cold-induced library. Surprisingly no clones displayed significantly repressed expression in response to cold. Analysis of a number of selected genes individually in northern blots of mRNA from cold-acclimated and non-acclimated plants largely confirmed the reverse northern analysis, verifying induction of expression of selected cDNAs in response to cold. The results showed that subtractive hybridization is an efficient method for identification of cold-induced genes in plants with limited sequence information available. This study also revealed that genes induced during cold acclimation of the cold-hardy citrus relative P. trifoliata are similar to those in Arabidopsis, indicating that similar pathways may be present and activated during cold acclimation in woody perennial plants.     

Adaptive character of metabolism in Eothenomys miletus in Hengduan Mountains region during cold acclimation

Environmental factors play an important role in the seasonal adaptation of body mass and thermogenesis in small, wild mammals. The purpose of the present study was to test the hypothesis that ambient temperature was a cue to trigger the seasonal adjustments in body mass, energy intake, uncoupling protein 1 (UCP1) in brown adipose tissue (BAT), and other biochemical characteristics of Eothenomys miletus during 49 days of cold exposure. Our data demonstrated that cold acclimation induced a remarkable decrease in body mass, a significant increase in energy intake and metabolic rate, and high expression of UCP1 in BAT of E. miletus. Biochemical characteristics of BAT and liver respiration were also increased following cold acclimation. These data suggest that E. miletus reduced the body mass and increased energy intake and expenditure under cold acclimation. Increased expression of UCP1 was potentially involved in the regulation of energy metabolism and thermogenic capacity following cold acclimation.     

利用DNA片段测序方法探究枳属和富民枳的分类地位

富民枳(Poncirus polyandra)属于芸香科(Rutaceae)枳属(Poncirus Raf.)。自发表以来,分类地位一直备受争议,其中在Flora of China中认为富民枳为柑橘杂交种(Poncirus polyandra),把枳属归并于柑橘属(Citrus)。该研究选取枳属的富民枳、枳(Poncirus trifoliata)及柑橘属下8个种共10个种47个个体作为研究材料,以九里香(Murraya exotica)为外类群,利用3个叶绿体片段(trn L-trn F、trn S-trn G、rbc L)、ITS片段和1个单拷贝核基因(Chr 5)数据构建系统发育树,探究枳属和富民枳的分类地位。结果表明:基于3个叶绿体片段数据构建的最大似然树(ML)和贝叶斯树(BI)的拓扑结构基本一致,10个物种聚为两大分支,即柑橘属的8个物种聚为一大分支,富民枳和枳聚为另一大分支。其中,富民枳所有个体聚为一小单系分支,枳的所有个体聚为一小单系分支,支持枳属和富民枳独立存在。2个核DNA片段数据结果显示,枳属的两个种与柑橘属的8个物种聚在一个大分支里,无法确立枳属的单系地位,但富民枳的9个个体聚在一起,暗示富民枳在遗传上是一个独立的类群。综上研究认为,无论是叶绿体DNA数据还是核DNA数据均支持富民枳是一个独立的物种,但核DNA数据不支持枳属成立。     

植物冷驯化相关信号机制

植物经过非致死温度的处理可以获得更强的抗冷能力叫做冷驯化,主要包括寒驯化和冻驯化 .在冷驯化过程中,质膜首先感受冷信号,调节胞质中IP3的含量,诱导胞质Ca2+浓度的升高,从而激活CBF基因的表达.至今已经克隆了大量的冷调控基因,组成了复杂的信号传导网络,其中ICE1-CBF-COR通路在植物的冷驯化过程中起到重要的作用.ICE1基因编码一个MYB类型的碱性螺旋 环-螺旋（bHLH）转录因子,在上游调节CBF和 其它转录因子的表达,提高抗冷性. HOS1蛋白通过泛素化介导的蛋白降解负调控ICE1,另外,CBF还通过转录的自我调控保持恰当的表达水平.基因的分析研究证明,RNA修饰和核质转运在植物的抗冷过程中也具有重要作用.在不依赖于CBF的途径中,转录因子HOS9和HOS10在调节抗冷有关基因的表达和提高抗冷能力方面具有至关重要的作用.