土壤添加蛇床子(Cnidium monnieri)和苦参(Sophora flavescens)对茄子黄萎病及根际微生物的化感影响

研究了蛇床子、苦参对茄子黄萎病菌的化感抑制作用及对茄子根际微生物数量的影响。结果表明,蛇床子、苦参的提取物抑制了茄子黄萎病菌菌丝生长,并随提取物浓度的增加抑制作用增强。在土壤中施入蛇床子、苦参提取物处理茄子苗后表现出一定的抗病效果,其中蛇床子处理的植株发病率最低。在土壤中添加蛇床子和苦参粉末,经腐解后,苦参处理的茄子植株株高、茎粗均高于对照处理,且二者处理后植株干物质含量高于对照。处理后茄子根际微生物中放线菌数量增加,真菌的数量变化差异不明显,细菌的数量相对减少,在初花期微生物的总量均高于初果期和定植期。     

嫁接对茄子连作土壤生物活性及种子萌发和幼苗生长的影响

研究了嫁接茄根系分泌物对黄萎菌菌丝生长的影响,嫁接对茄子根际土壤黄萎菌数量、酶活性和微生物种群数量影响及嫁接正重茬土壤水提液对茄子种子萌发和幼苗生长的影响。结果表明：在培养4～5 d,嫁接茄根系分泌物显著抑制了黄萎菌菌落生长;嫁接茄土壤黄萎菌数量在不同时期均显著低于对照;总体上,嫁接茄根际脱氢酶、过氧化物酶和多酚氧化酶较对照有所增强;嫁接还表现出根际微生物总量、细菌、放线菌数量增加,真菌数量减少,细菌数比真菌数和放线菌数比真菌数增加;嫁接茄正重茬土壤水提液表现出促进茄子发芽和幼苗生长(根长除外),重茬自根茄土壤水提液抑制了茄子发芽和幼苗生长。     

不同连作年限土壤对茄子土壤生物学活性的影响及其嫁接调节

探讨了不同连作年限土壤对茄子根际土壤微生物数量、土壤酶活性的影响及其相关性和嫁接对重要相关因子的调节作用。结果表明:随着连作年限的增加,茄子根际土壤细菌数量和放线菌数量呈下降趋势,真菌数量呈增加趋势;根际土壤中的过氧化氢酶、过氧化物酶、多酚氧化酶、蛋白酶的活性呈降低趋势;土壤微生物数量和土壤酶活性之间有显著的相关性。其中过氧化氢酶、过氧化物酶、多酚氧化酶、蛋白酶是影响根际土壤中细菌和放线菌数量的主要因子,蛋白酶是影响根际土壤中真菌数量的主要因子。嫁接能提高土壤酶活性,缓解连作土壤带来的胁迫。     

伊贝根际微生物分布与西贝素的相关性

分析了伊犁贝母不同生育期(返青期、显蕾期、盛花期和收获期)根际、非根际可培养土壤微生物动态变化,探讨了根际土壤微生物与西贝素含量之间的相关性。结果表明,在伊犁贝母的生长发育期,根际和非根际土壤微生物数量的分布规律是:细菌放线菌真菌。除了显蕾期非根际真菌数量大于根际以外,其他生长时期根际细菌、放线菌和真菌数量远远大于非根际,细菌根际效益明显。盛花期根际土壤中细菌和真菌数量达到了最多。土壤真菌与西贝素含量呈极显著正相关。     

微生物菌剂施用对设施茄子根际土壤养分和细菌群落多样性的影响

[背景]设施茄子连作种植和化学肥料过量施用造成土壤养分失衡、微生物多样性降低、土传病害严重等土壤质量问题,微生物制剂是改善土壤环境质量的一项重要措施。[目的]确定微生物菌剂施用对设施茄子根际土壤养分及细菌群落多样性的影响。[方法]在河北省农林科学院鹿泉大河实验园区,以含有哈茨木霉和巨大芽孢杆菌的微生物菌剂为供试菌剂,采用传统的化学分析方法测定微生物菌剂处理和对照茄子开花期、拉秧期土壤的养分含量;采用稀释涂平板方法测定土壤可培养微生物的数量;采用高通量测序技术测定土壤细菌16S rRNA基因V3-V4区,分析处理和对照土壤的微生物多样性和群落分布规律。[结果]与对照相比,微生物菌剂处理提高了茄子开花期和拉秧期的根际土壤养分含量,拉秧期微生物菌剂处理根际土壤中全氮、碱解氮、有效磷、速效钾含量分别较对照增加13.85%、21.07%、31.51%和55.94%;施用微生物菌剂能够改变土壤可培养微生物的数量和构成,微生物菌剂处理土壤中细菌、真菌、放线菌的数量均显著增加,其中细菌、放线菌在微生物总量中所占比例增加,而真菌的占比则有所降低。微生物菌剂处理能够提高土壤微生物的Shannon指数、降低Simpson指数,ACE指数和Chao1指数差异不显著,表明微生物菌剂能够增加土壤的微生物群落多样性,对微生物群落丰富度影响不明显。从目水平上分析菌剂处理和对照的微生物组成,发现微生物菌剂处理增加了土壤中黄单胞菌目(Xanthomonadales)、红螺菌目(Rhodospirillales)、鞘脂杆菌目(Sphingobacteriales)、芽孢杆菌目(Bacillales)、纤维黏网菌目(Cytophagales)、假单胞菌目(Pseudomonadales)等优势菌目的占比,降低了伯克氏菌目(Burholderiales)、黄杆菌目(Flavobacteriales)等病原菌的占比。微生物菌剂的施入能够促进茄子营养生长,增加茄子的产量,增幅为18.52%。[结论]微生物菌剂作为一种新型环保肥料,具有改善土壤营养状况、增加土壤可培养微生物数量、提高土壤微生物多样性的作用,该结果为微生物菌剂的合理施用提供了科学依据。     

干旱胁迫对蒙古黄芪生物量及其根际微生物种群数量的影响

以‘武川’和‘浑源’2个蒙古黄芪地方品种为试材,采用盆栽控水模拟干旱处理,研究干旱胁迫下黄芪生物量及根际微生物数量的动态变化规律。结果显示：随着干旱程度的加剧,2个品种的根际细菌和放线菌种群数量均呈先上升后下降的变化趋势,真菌数量却呈现持续减少,而细菌数量在根际微生物区系中占绝对优势;随干旱强度升高,2个品种黄芪根、叶组织相对含水量均表现出明显的逐渐下降趋势,其地上部生物量、根系生物量也均降低,而根冠比却逐渐增大;黄芪根际各菌类数量与其地上生物量存在显著正相关关系,但与根系生物量无显著相关关系。研究表明,黄芪的生长及其根际微生物数量均受到干旱胁迫的影响,且适度干旱有助于提高黄芪根际细菌及放线菌的数量,从而改变根际微生物群落结构组成,促进黄芪地上生物量的积累。     

根际土壤微生物变化对西洋参种植的影响

以陕西产地不同年限西洋参根际土壤微生物（包括解钾、解磷及自生固氮菌）为研究对象,通过对根际土壤微生物进行分离、培养、计数和鉴定,并对比栽参后的玉米轮作根际土壤微生物数量和类群的变化特征,研究了根际土壤微生物的动态变化对西洋参连续种植的影响。结果表明：与轮作根际土壤相比,随西洋参生长期的增加其根际土壤中细菌数量的变化不明显,但优势细菌种类减少;放线菌数量及种类均有不同程度的减少;引起西洋参病害的霉菌类群明显增加;解磷、解钾、自生固氮菌的比例明显失调。此种变化可引起土壤理化性质的改变,进而影响西洋参的连续种植情况。     

大棚蔬菜轮/连作系统土壤肥力与微生物因子综合评价

从土壤肥力与微生物因子探索连茬障碍机理,以期为其提供科学依据。研究草莓番茄轮作(RST)、番茄连作4年(CT4)和番茄连作10年(CT10)3种蔬菜种植模式根际与非根际土壤微生物区系及生理菌群,并对土壤肥力与微生物生物因子进行主成分分析。结果表明根际土壤微生物三大类群和生理菌群数量均高于非根际,根际效应显著。番茄连作根际与非根际土壤细菌和放线菌数量呈现先增加后减少趋势;真菌数量呈线型增加趋势,CT4和CT10在根际与非根际较RST分别增加9.09%和2.11%、75.48%和57.72%。番茄连作根际土壤硝化细菌和好气性自生固氮菌数量的减少,氨化细菌与好气性纤维素分解菌在短期连作表现为增加长期减少的变化趋势;解钾菌、无机磷和有机磷细菌数量在根际与非根际土壤均减少。在6种研究的种植模式中,RST根际土壤状况最好,其次为CT4的根际与RST非根际土壤,CT10的根际土壤、CT4与CT10非根际土壤状况最差。结论是蔬菜连作造成土壤质量下降,连作年限越长下降越显著。     

嫁接对铜胁迫下黄瓜根际土壤微生物特性和酶活性的影响

采用盆栽试验方法,研究了嫁接（以黑籽南瓜为砧木）对铜胁迫下黄瓜根际土壤微生物生物量、微生物种群数量和土壤酶活性的影响.结果表明： 铜胁迫下黄瓜根际土壤微生物生物量碳（MBC）和微生物生物量氮（MBN）含量显著下降,基础呼吸和代谢熵显著上升,但嫁接黄瓜根际土壤MBC和MBN含量显著高于自根黄瓜,而基础呼吸和代谢熵则显著低于自根黄瓜.铜胁迫下,根际土壤放线菌和自生固氮菌的数量显著下降,真菌数量显著上升,而细菌数量变化不显著;嫁接黄瓜根系土壤细菌、放线菌、自生固氮菌的数量显著高于自根黄瓜,而真菌数量显著低于自根黄瓜.嫁接黄瓜根际土壤脲酶、磷酸酶、蔗糖酶、过氧化氢酶活性在铜胁迫下显著高于自根黄瓜.试验结果证明嫁接使铜胁迫下黄瓜根际土壤微生物环境和酶活性得到了改善和提高,从而提高了黄瓜植株对铜胁迫的抵抗力.     

抗感枯萎病西瓜根际微生物比较研究

本文通过传统微生物培养方法,研究了在土培和基质培条件下,抗感枯萎病西瓜不同生育期根际和非根际微生物数量的变化.结果表明,微生物数量在根际显著高于在非根际微生物,且随西瓜生长发育的阶段不同而变化,苗期根际微生物数量最少,以后随西瓜生长发育,根际微生物数量不断增加,至生长旺盛的开花结果期,微生物数量达到最高,在西瓜生长发育后期,根际微生物数量又有所回落.西瓜抗枯萎病性与根际细菌的数量具有相关性,在生长发育各个阶段,无论是土培还是基质培,均表现为抗病材料的根际细菌数量高于感病材料的根际细菌数量.根际真菌与放线菌数量与西瓜的抗感枯萎病性没有相关性.非根际微生物数量在整个生育期变化辐度较小.非根际细菌数量在土培条件下几乎保持在同一水平,在基质培条件下迅速增加,至生长后期有所回落.非根际真菌与放线菌数量在土培和基质培条件下均于生长后期达到最高.     

番茄根际微生物种群动态变化及多样性

采用盆栽试验的方法对番茄根际主要微生物种群在不同生育期的动态变化进行了跟踪研究.结果表明,在番茄整个生育期内,可培养细菌数量在初花期和初果期时最多;放线菌数量从苗期到末期逐渐减少;真菌数量逐渐增多.番茄对细菌根际效应明显.DGGE图谱显示不同生育期番茄根际均具有较高的细菌多样性.根际细菌种类和数量在初花期发生较为显著的变化,初果期根际群落多样性指数(H)和物种丰度(S)值都达到最高,微生物最丰富,是筛选拮抗菌的较好时期.     

Frankia populations in soils under different tree species—with special emphasis on soils under Betula pendula

The major source of substrates for microbial activity in the ectorhizosphere and on the rhizoplane are rhizodeposition products. They are composed of exudates, lysates, mucilage, secretions and dead cell material, as well as gases including respiratory CO₂. Depending on plant species, age and environmental conditions, these can account for up to 40% (or more) of the dry matter produced by plants. The microbial populations colonizing the endorhizosphere, including mycorrhizae, pathogens and symbiotic N₂-fixers have greater access to the total pool of carbon including that recently derived from photosynthesis. Utilization of rhizodeposition products induces at least a transient increase in soil biomass but a sustained increase depends on the state of the native soil biomass, the flow of other metabolites from the soil to the rhizosphere and the water relations of the soil. In addition, the phenomena of oligotrophy, cryptic growth, plasmolysis, dormancy and arrested metabolism can all influence the longevity of rhizosphere organisms. With this background, microbial growth in the rhizosphere will be discussed.     

Rhizosphere Microbial Densities and Trace Metal Tolerance of the Nickel Hyperaccumulator Alyssum Serpyllifolium Subsp. Lusitanicum

In this study we determine culturable microbial densities (total heterotrophs, ammonifiers, amylolytics and cellulolytics) and bacterial resistance to Co, Cr, and Ni in bulk and rhizosphere soils of three populations of the Ni-hyperaccumulator Alyssum serpyllifolium subsp. lusitanicum and the excluder Dactylis glomerata from ultramafic sites (two populations in Northeast (NE) Portugal (Samil (S), Morais (M)) and one population in Northwest (NW) Spain (Melide (L)). The relationship between bioavailable metal concentrations (H₂O-soluble) and microbial densities were analysed. Significant differences in microbial densities and metal-resistance were observed between the two species and their three populations. The hyperaccumulator showed higher microbial densities (except cellulolytics) and a greater rhizosphere effect, but this was only observed in S and M populations. These populations of A. serpyllifolium also showed selective enrichment of Ni-tolerant bacteria at the rhizosphere where Ni solubility was enhanced (densities of Ni-resistant bacteria were positively correlated with H₂O-soluble Ni). These rhizobacteria could solubilise Ni in the soil and potentially improve phytoextraction strategies.     

Despite Long-Term Compost Amendment Seasonal Changes are Main Drivers of Soil Fungal and Bacterial Population Dynamics in a Tuscan Vineyard

The effect of long-term (8 years) compost treatments (compost or compost plus mineral fertilizer) on genetic structure of bacterial and fungal populations in both bulk soil and rhizosphere of grapevine (Vitis vinifera) was analyzed in respect to a control constituted by the soil treated with mineral fertilization. Soils were sampled in early summer (July), mid-summer (August), and before harvest (October). Bacterial and fungal populations were characterized by genetic fingerprints generated by the application of 16S rDNA and ITS rDNA Multiplex Terminal Fragment Length Polymorphism (M-TRFLP) technique. Compost induced no significant differences at any time on microbial communities from bulk soil samples, whereas seasonal variations significantly affected both bacterial and fungal populations as indicated by the Multi Dimensional Scaling (MDS) ordination method of the M-TRFLPs results. MDS analysis of grapevine rhizosphere M-TRFLPs showed that temporal separation was significant for the bacterial population only. Results suggested that soil microbial populations in vineyard productive ecosystems may be sensitive to environmental changes induced by seasonal variations and show a certain degree of resilience to different agricultural practices.     

西北黄土高原柠条种植区土壤微生物多样性分析

柠条锦鸡儿(Caragana korshinskii)是我国黄土高原区重要的饲用豆科灌木植物。为揭示土壤微生物与柠条种植之间的关系,采用未培养技术提取样品宏基因组DNA,分别构建柠条根表、根际和自然土16SrDNA文库,分析各文库微生物群落的变化。结果显示,随距离柠条根部渐远,微生物数量呈现递减趋势。聚类分析发现,变形杆菌纲是根表土壤区系中的优势微生物种群(70.3%),尤其存在大量α-Proteobacteria类的能诱使植物形成根瘤的根瘤菌和对植物有促生作用的γ-Proteobacteria类微生物;而在根际和自然土中,酸杆菌属(Acidobacteria)和古菌(Archaea)数量较多。柠条根际的多样性指数最高,而根表和自然土微生物类群具有较高的优势度,表现出从根表、根际植物相关微生物到自然土单一简单微生物类群的过渡。说明植物根系和土壤环境与微生物类群具有相互选择性。     

转Bt基因抗虫棉根际微生物区系和细菌生理群多样性的变化

在大田栽培条件下 ,以转 Bt基因抗虫棉 GK-12和常规棉花泗棉 3号作为材料 ,在棉花不同发育时期 ,于 2 0 0 1和 2 0 0 2连续两年测定棉花根际土壤细菌、放线菌和真菌数量的变化 ,并在 2 0 0 2年棉花的花铃期和吐絮期对根际细菌生理群的数量和多样性进行了分析 ,结果表明 :虽然不同年份和生育期棉花根际微生物数量存在差异 ,但是 ,年度间和相同的发育时期棉花根际微生物的数量变化趋势一致。在棉花的苗期和吐絮期 ,转 Bt基因抗虫棉根际微生物的数量与对照差异不显著 ;在棉花的花铃期 ,转 Bt基因抗虫棉根际细菌的数量比对照增加 ,放线菌的数量差异不显著 ,而真菌的数量变化没有规律。在棉花发育的花铃期和吐絮期 ,Bt棉根际细菌生理群的总数量比常规棉增加 ,但是根际细菌生理群的 Simpson指数、Shannon-Wiener指数和细菌生理群分布的均匀度下降     

Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed

The bacterial rhizosphere communities of three host plants of the pathogenic fungus Verticillium dahliae, field-grown strawberry (Fragaria ananassa Duch.), oilseed rape (Brassica napus L.), and potato (Solanum tuberosum L.), were analyzed. We aimed to determine the degree to which the rhizosphere effect is plant dependent and whether this effect would be increased by growing the same crops in two consecutive years. Rhizosphere or soil samples were taken five times over the vegetation periods. To allow a cultivation-independent analysis, total community DNA was extracted from the microbial pellet recovered from root or soil samples. 16S rDNA fragments amplified by PCR from soil or rhizosphere bacterium DNA were analyzed by denaturing gradient gel electrophoresis (DGGE). The DGGE fingerprints showed plant-dependent shifts in the relative abundance of bacterial populations in the rhizosphere which became more pronounced in the second year. DGGE patterns of oilseed rape and potato rhizosphere communities were more similar to each other than to the strawberry patterns. In both years seasonal shifts in the abundance and composition of the bacterial rhizosphere populations were observed. Independent of the plant species, the patterns of the first sampling times for both years were characterized by the absence of some of the bands which became dominant at the following sampling times. Bacillus megaterium and Arthrobacter sp. were found as predominant populations in bulk soils. Sequencing of dominant bands excised from the rhizosphere patterns revealed that 6 out of 10 bands resembled gram-positive bacteria. Nocardia populations were identified as strawberry-specific bands.     

Plant rhizosphere influence on microbial C metabolism: the role of elevated CO2, N availability and root stoichiometry

Microbial decomposer C metabolism is considered a factor controlling soil C stability, a key regulator of global climate. The plant rhizosphere is now recognized as a crucial driver of soil C dynamics but specific mechanisms by which it can affect C processing are unclear. Climate change could affect microbial C metabolism via impacts on the plant rhizosphere. Using continuous ¹³C labelling under controlled conditions that allowed us to quantify SOM derived-C in all pools and fluxes, we evaluated the microbial metabolism of soil C in the rhizosphere of a C4 native grass exposed to elevated CO₂ and under variation in N concentrations in soil and in plant root C:N stoichiometry. Our results demonstrated that this plant can influence soil C metabolism and further, that elevated CO₂ conditions can alter this role by increasing microbial C efficiency as indicated by a reduction in soil-derived C respiration per unit of soil C-derived microbial biomass. Moreover, under elevated CO₂ increases in soil N, and notably, root tissue N concentration increased C efficiency, suggesting elevated CO₂ shifted the stoichiometric balance so N availability was a more critical factor regulating efficiency than under ambient conditions. The root C:N stoichiometry effect indicates that plant chemical traits such as root N concentration are able to influence the metabolism of soil C and that elevated CO₂ conditions can modulate this role. Increased efficiency in soil C use was associated with negative rhizosphere priming and we hypothesize that the widely observed phenomenon of rhizosphere priming may result, at least in part, from changes in the metabolic efficiency of microbial populations. Observed changes in the microbial community support that shifting microbial populations were a contributing factor to the observed metabolic responses. Our case study points at greater efficiency of the SOM-degrading populations in a high CO₂, high N world, potentially leading to greater C storage of microbially assimilated C in soil.     

持续干旱对樱桃根际土壤细菌数量及结构多样性影响

以1年生吉塞拉实生容器苗为试材,采用绿色荧光蛋白基因标记技术,研究了干旱胁迫(连续干旱0、7、14、21、28 d和35 d)对樱桃根际促生细菌YT3的标记菌YT3-gfp数量的影响,同时结合平板计数法和末端限制性片段长度多态性分析(terminal restriction fragment length polymorphism,T-RFLP)技术,研究了干旱对樱桃土壤中的微生物数量及细菌群落结构多样性影响。结果表明:樱桃根际土壤中的YT3-gfp数量是非根际土壤中的8.75—28.77倍,随着持续干旱强度的增加,YT3-gfp的数量先增加后减小。干旱对根际土壤中YT3-gfp数量的影响大于对非根际土壤的影响,分别在持续干旱至第21天和28天时,YT3-gfp的数量达到最大值。随着持续干旱强度的增加,根际土壤中细菌和放线菌数量先增加后减小,而真菌的数量一直减少。此外,持续干旱至第21天或28天时,樱桃根际土壤具有最高的丰富度指数、多样性指数和最低的优势度指数。基于T-RFLP的主成分分析结果显示持续干旱14—35 d时,其细菌群落结构成为一个相对独立的群,群落结构趋于多样性;而持续干旱7 d和42 d构成另外两个相对独立的群,群落结构趋于简单。以上分析可知,干旱对土壤微生物影响显著,一定强度的干旱可提高细菌和放线菌数量,提高细菌群落结构多样性,适当干旱对维持根际土壤细菌群落结构多样性是有益的。     

Effects of site and plant species on rhizosphere community structure as revealed by molecular analysis of microbial guilds

The bacterial and fungal rhizosphere communities of strawberry (Fragaria ananassa Duch.) and oilseed rape (Brassica napus L.) were analysed using molecular fingerprints. We aimed to determine to what extent the structure of different microbial groups in the rhizosphere is influenced by plant species and sampling site. Total community DNA was extracted from bulk and rhizosphere soil taken from three sites in Germany in two consecutive years. Bacterial, fungal and group-specific (Alphaproteobacteria, Betaproteobacteria and Actinobacteria) primers were used to PCR-amplify 16S rRNA and 18S rRNA gene fragments from community DNA prior to denaturing gradient gel electrophoresis (DGGE) analysis. Bacterial fingerprints of soil DNA revealed a high number of equally abundant faint bands, while rhizosphere fingerprints displayed a higher proportion of dominant bands and reduced richness, suggesting selection of bacterial populations in this environment. Plant specificity was detected in the rhizosphere by bacterial and group-specific DGGE profiles. Different bulk soil community fingerprints were revealed for each sampling site. The plant species was a determinant factor in shaping similar actinobacterial communities in the strawberry rhizosphere from different sites in both years. Higher heterogeneity of DGGE profiles within soil and rhizosphere replicates was observed for the fungi. Plant-specific composition of fungal communities in the rhizosphere could also be detected, but not in all cases. Cloning and sequencing of 16S rRNA gene fragments obtained from dominant DGGE bands detected in the bacterial profiles of the Rostock site revealed that Streptomyces sp. and Rhizobium sp. were among the dominant ribotypes in the strawberry rhizosphere, while sequences from Arthrobacter sp. corresponded to dominant bands from oilseed rape bacterial fingerprints.