Geographic and stratigraphic distributions of the Caribbean species of Cladocora (Scleractinia, Faviidae)

A complete account of the faviid genus Cladocora within the Caribbean is presented. In the Caribbean this genus represents an extant group that had its earliest occurrence during the Campanian-Maastrichtian of Jamaica. Recent forms have been reported throughout the Caribbean. The following forms were found (with stratigraphic ranges in the Caribbean): C. arbuscula (Pliocene-Recent), C. debilis (Pleistocene-Recent), C. gracilis (Middle-Upper Maastrichtian), C. jamaicaensis (Campanian-Maastrichtian and Eocene), C. johnsoni (Pliocene), and C. recrescens (Middle-Upper Oligocene). The occurrence of the genus Cladocora in the Caribbean is largely continuous from the Campanian to Recent, during the majority of the Caribbean species show affinities to European assemblages. For the time intervals Paleocene, Lower Oligocene, and Miocene the taxon has not been reported from the Caribbean.     

Molecular phylogeny of an endemic radiation of Cuban toads (Bufonidae: Peltophryne) based on mitochondrial and nuclear genes

Aim In this study we present a molecular phylogenetic and phylogeographical analysis of Peltophryne (Anura: Bufonidae), an endemic genus of Antillean toads, to investigate the spatial and temporal origins of the genus, with particular focus on the eight Cuban species. Location Greater Antilles, with extensive sampling of the Cuban archipelago. Methods We obtained DNA sequence data from two mitochondrial genes, cytochrome c oxidase subunit I (COI) and ribosomal RNA (16S), for 124 toads representing all eight Cuban species, and combined this with published data from Hispaniola (one of three species) and Puerto Rico (one of one species) to establish a molecular phylogeny for Peltophryne. In addition, we explored the phylogeographical structure of widespread Cuban species. For a subset of 42 toads we also obtained DNA sequence data from two nuclear genes, recombination activator‐1 (RAG‐1) and chemokine receptor 4 (CXCR‐4). We combined our molecular data with published DNA sequences from a global sample of bufonid toads to place the spatial and temporal origins of Peltophryne in the Caribbean within a fuller geographical and phylogenetic context. Results All phylogenetic analyses supported the monophyly of West Indian toads. The ancestor of Peltophyrne diverged from its mainland source around the Eocene–Oligocene boundary, with a subsequent radiation across the Caribbean islands taking place during the Miocene. Cuban species are monophyletic with a basal split in the early–middle Miocene that separates extant small‐bodied from large‐bodied species. Extensive mitochondrial DNA (mtDNA) sampling within widespread Cuban species revealed contrasting phylogeographical patterns. Peltophryne taladai and P. empusa showed deeply divergent lineages, whereas no geographical structure was observed in the widespread P. peltocephala. Main conclusions Our timeline for Peltophryne diversification is consistent with a biogeographical model requiring no long‐distance overwater dispersal. Although confidence intervals on divergence time estimates are wide, the stem age of Peltophyrne coincides with the hypothesized GAARlandia landspan or archipelago, which may have connected South America briefly with the Antilles. The ages of Peltophryne for Puerto Rico, Hispaniola and Cuba are consistent with a recently proposed vicariance scenario for the region. Our molecular results support the recognition of all eight species in Cuba, and provide evidence of possible cryptic species.     

Molecular Systematics of Threatened Seed Plant Species Endemic in the Caribbean Islands

A review of available Caribbean Island red-lists species (CR and EN categories based on the IUCN guidelines from 2001, and E category established according to the IUCN guidelines from 1980) is presented. A database of over 1,300 endemic species that are either Critically Endangered or Endangered sensu IUCN was created. There are molecular systematic studies available for 112 of them. Six of these species (in six genera) are the only members of early divergent lineages that are sister to groups composed of a large number of clades. Seven of the species (in seven genera) belong to clades that have a small number of taxa but are sister to species/genus-rich clades. Ten of the species (in six genera) are sister to taxa restricted to South America or nested in clades endemic to this region. Fifty-seven of the species (in 35 genera) are sister to Caribbean Island endemic species. Erigeron belliastroides, an Endangered (EN) Cuban endemic, is sister to the Galapagos genus Darwiniothamnus. The phylogenetic placement of four of the threatened species resulted in changes in their taxonomic placement; they belong to polyphyletic or paraphyletic genera.     

Phylogeny and classification of the Cuban species of Elaphoglossum (Dryopteridaceae), with description of Elaphoglossum sect. Wrightiana sect. nov.

Although a worldwide phylogeny of the bolbitidoid fern genus Elaphoglossum is now available, little is known about the phylogenetic position of the 34 Cuban species. We performed a phylogenetic analysis of a chloroplast DNA dataset for atpß-rbcL (including a fragment of the gene atpß), rps4-trnS, and trnL-trnF. The dataset included 79 new sequences of Elaphoglossum (67 from Cuba) and 299 GenBank sequences of Elaphoglossum and its most closely related outgroups, the bolbitidoid genera Arthrobotrya, Bolbitis, Lomagramma, Mickelia, and Teratophyllum. We obtained a well-resolved phylogeny including the seven main lineages recovered in previous phylogenetic studies of Elaphoglossum. The Cuban endemic E. wrightii was found to be an early diverging lineage of Elaphoglossum, not a member of E. sect. Squamipedia where it was previously classified. We propose a new section for this species: E. sect. Wrightiana. The early diverging position of E. wrightii is of particular interest because the species is a root climber (i.e., climbing from the soil on the lower portions of tree trunks and not losing its connection with the soil), a growth habit it shares with its closest bolbitidoid outgroup genera. This suggests that holoepiphytism evolved later in Elaphoglossum, and the primary hemiepiphytism of E. amygdalifolium, which is sister to the rest of the genus, was derived independently from ancestors that were root climbers. Based on our phylogenetic analysis and morphological investigations, the species of Cuban Elaphoglossum were found to occur in E. sects. Elaphoglossum, Lepidoglossa, Polytrichia, Setosa, and Squamipedia.     

Una nueva especie de Chusquea (Poaceae: Bambusoideae) de la Cordillera de Mérida, Venezuela

A new species of woody bamboo (Poaceae: Bambusoideae),Chusquea guirigayensis, is described and illustrated. This species is placed inChusquea sect.Swallenochloa (McClure) L. G. Clark because of its shrubby habit, short waxy internodes, intravaginal branching, and linearly arranged subsidiary buds/branches. In addition, we discuss related species, and describe the ecology and distribution of the new species. Separate keys based on sterile and fertile material of the Venezuelan species ofC. sect.Swallenochloa are provided.     

The phylogenetic position of the extinct Cuban Macaw Ara tricolor based on complete mitochondrial genome sequences

The Cuban Macaw Ara tricolor was a species of macaw native to Cuba and Isla de la Juventud in the Caribbean that became extinct in the 1860s. Morphologically, it was similar to, but distinctively smaller than, the large red macaws – Scarlet Macaw Ara macao and Red‐and‐green Macaw Ara chloropterus. A close affinity with the Scarlet Macaw has been suggested based on plumage similarities. In this study we use complete mitochondrial genome sequences to examine the phylogenetic position of the Cuban Macaw. Our results do not indicate a sister‐species relationship with the Scarlet Macaw but place the Cuban Macaw as sister to the two red species and the two large green macaws, the Military Macaw Ara militaris and the Great Green Macaw Ara ambiguus. Divergence estimates suggests that the Cuban Macaw separated from this group approximately 4 million years ago.     

Comparisons of sexual reproduction in Carijoa riisei (Cnidaria,Alcyonacea) in South Atlantic,Caribbean, and Pacific areas

Soft corals show a wide variety of reproductive strategies, including both asexual and sexual reproduction which can influence macro-evolutionary processes. The octocoral Carijoa riisei has an ample geographical distribution in Pacific and southern Atlantic and also in Caribbean region. This species was considered invasive in Hawaii, and its capacity for rapid proliferation is recognized, but recent studies, however, have indicated that it appears to be native to the Indo-Pacific region. The present study examined the reproductive biology of C. riisei in the Atlantic basin. The results were then compared to previous studies of the same species from the Pacific (Hawaii) and Caribbean (Puerto Rico) regions to examine the hypothesis that the reproductive patterns of C. riisei populations are the same throughout its geographical distribution, independent of its native or non-native status. Samples were collected on a monthly basis from May/2007 to April/2008 at Porto de Galinhas (Pernambuco State, Brazil). This species was found to have similar reproduction patterns in Brazil, the Caribbean, and in Hawaii (a gonochoric reproductive pattern and continuous and asynchronous gamete release). The similarities of their traits contribute to its rapid proliferation and occupation of spaces left by other species, independent of its native or non-native status.     

Lobelia vivaldii (Campanulaceae: Lobelioideae), a remarkable new species of sect. Tylomium from Isla de Mona,Puerto rico

A new species ofLobelia (Campanulaceae: Lobelioideae) is described from Isla de Mona, a Caribbean island not previously known to harbor the genus. The small woody rosette-plants were collected in 1988 and 1992 at the northeastern corner of the island, where they grew from crevices in the vertical limestone cliffs, approximately 60 m above the sea. The new species,Lobelia vivaldii, belongs to sect.Tylomium, a group of approximately 36 suffruticose and woody species endemic to the Caribbean basin. Within that section, it is most similar to and apparently derived fromL. cirsiifolia, a less woody rain forest species found at higher elevations on several islands in the Lesser Antilles.     

Genetic Diversity and Connectivity in the Threatened Staghorn Coral (Acropora cervicornis) in Florida

Over the past three decades, populations of the dominant shallow water Caribbean corals, Acropora cervicornis and A. palmata, have been devastated by white-band disease (WBD), resulting in the listing of both species as threatened under the U.S. Endangered Species Act. A key to conserving these threatened corals is understanding how their populations are genetically interconnected throughout the greater Caribbean. Genetic research has demonstrated that gene flow is regionally restricted across the Caribbean in both species. Yet, despite being an important site of coral reef research, little genetic data has been available for the Florida Acropora, especially for the staghorn coral, A. cervicornis. In this study, we present new mitochondrial DNA sequence data from 52 A. cervicornis individuals from 22 sites spread across the upper and lower Florida Keys, which suggest that Florida''s A. cervicornis populations are highly genetically interconnected (F_ST = −0.081). Comparison between Florida and existing mtDNA data from six regional Caribbean populations indicates that Florida possesses high levels of standing genetic diversity (h = 0.824) relative to the rest of the greater Caribbean (h = 0.701±0.043). We find that the contemporary level of gene flow across the greater Caribbean, including Florida, is restricted ( = 0.117), but evidence from shared haplotypes suggests the Western Caribbean has historically been a source of genetic variation for Florida. Despite the current patchiness of A. cervicornis in Florida, the relatively high genetic diversity and connectivity within Florida suggest that this population may have sufficient genetic variation to be viable and resilient to environmental perturbation and disease. Limited genetic exchange across regional populations of the greater Caribbean, including Florida, indicates that conservation efforts for A. cervicornis should focus on maintaining and managing populations locally rather than relying on larval inputs from elsewhere.     

Genetic evidence of hybridization between the critically endangered Cuban crocodile and the American crocodile: implications for population history and in situ/ex situ conservation

Inter-specific hybridization may be especially detrimental when one species is extremely rare and the other is abundant owing to the potential for genetic swamping. The Cuban crocodile (Crocodylus rhombifer) is a critically endangered island endemic largely restricted to Zapata Swamp, where it is sympatric with the widespread American crocodile (C. acutus). An on-island, C. rhombifer captive breeding program is underway with the goals of maintaining taxonomic integrity and providing a source of individuals for reintroduction, but its conservation value is limited by lack of genetic information. Here we collected mtDNA haplotypic and nuclear genotypic data from wild and captive C. rhombifer and C. acutus in Cuba to: (1) investigate the degree of inter-specific hybridization in natural (in situ) and captive (ex situ) populations; (2) quantify the extent, distribution and in situ representation of genetic variation ex situ; and (3) reconstruct founder relatedness to inform management. We found high levels of hybridization in the wild (49.1%) and captivity (16.1%), and additional evidence for a cryptic lineage of C. acutus in the Antilles. We detected marginally higher observed heterozygosity and allelic diversity ex situ relative to the wild population, with captive C. rhombifer exhibiting over twice the frequency of private alleles. Although mean relatedness was high in captivity, we identified 37 genetically important individuals that possessed individual mean kinship (MK) values lower than the population MK. Overall, these results will guide long-term conservation management of Cuban crocodiles for maintaining the genetic integrity and viability of this species of high global conservation value.     

Depth-related variation in epiphytic communities growing on the brown alga Lobophora variegata in a Caribbean coral reef

Lobophora variegata is a dominant macroalga on coral reefs across the Caribbean. Over the last two decades, it has expanded its vertical distribution to both shallow and deep reefs along the leeward coast of the island of Cura?ao, Southern Caribbean. However, the ecological implications of this expansion and the role of L. variegata as a living substratum are poorly known. This study compared epiphytic algal communities on L. variegata blades along two depth transects (6?C40?m). The epiphytic community was diverse with a total of 70 species of which 49 were found directly attached to L. variegata. The epiphytic community varied significantly between blade surface, depth and site. The greatest number of genera per blade was found growing on the underside of the blades regardless of site and depth. Filamentous red algae (e.g. Neosiphonia howei) were commonly found on the upperside of the blades over the whole depth gradient, whereas the underside was mainly colonized by calcifying (e.g. Hydrolithon spp., Jania spp., Amphiroa fragillissima), fleshy red algae (e.g. Champia spp., Gelidiopsis spp., Hypnea spinella) and foliose brown alga (e.g. Dictyota spp.). Anotrichum tenue, a red alga capable of overgrowing corals, was a common epiphyte of both blade surfaces. L. variegata plays an important role as a newly available substratum. Thus, its spread may influence other algal species and studies of benthic macroalgae such as L. variegata should also take into consideration their associated epiphytic algal communities.     

Toxic,invasive treefrog creates evolutionary trap for native gartersnakes

Possession of unique defensive toxins by nonindigenous species may increase the likelihood of creating evolutionary traps for native predators. We tested the hypothesis that nonindigenous, toxic Cuban Treefrogs (Osteopilus septentrionalis) have created an evolutionary trap for native, generalist snakes. Additionally, we explored the possibility that populations of snakes that co-occur with Cuban Treefrogs have responded in ways that allow them to escape potential trap dynamics. To evaluate a potential fitness cost of consuming Cuban Treefrogs, we monitored growth of 61 wild-caught Common Gartersnakes (Thamnophis sirtalis) fed exclusive diets of either Cuban Treefrogs, native Green Treefrogs (Hyla cinerea), or native Golden Shiners (Notemigonus crysoleucas). Snakes in the Cuban Treefrog diet treatment gained less than half the mass of those consuming native prey, and Cuban Treefrogs were significantly less digestible than native prey. There was no difference in the response of gartersnakes to prey scent cues of Cuban Treefrogs and Green Treefrogs. Our results indicate that Cuban Treefrogs likely represent an evolutionary trap for snakes because consumption of these frogs carries fitness costs, yet snakes fail to recognize this prey as being costly. We found no difference in growth or response to prey cues between snakes from invaded and non-invaded regions, suggesting snakes have not responded to escape trap dynamics. Interactions of native snakes and Cuban Treefrogs support the idea that introduced species with novel toxins may increase the likelihood of evolutionary trap formation.     

Studies on the cyanophytes of Cuba 4–6

The article comprises three subsequently published studies of the taxonomy of Cuban cyanophyte/cyanobacterial flora: (4)Lyngbyopsis willei: This oscillatorialean genus and species, described byGardner (1927) from mountain creeks in Puerto Rico, was found more than 50 years later in similar localities in Cuba. The morphological variability of the Cuban populations is described and similarity with the genusSchizothrix (sect.Inactis) discussed. —(5)Cylindrospermum-species: The morphological variability of twenty-oneCylindrospermum-populations collected in Cuba was studied, documented by graphical methods and compared with the published data. Four new taxa were recognized (C. minutissimum v.rinoi, C. zonatum, C. bourrellyi, andC. desikacharyi). The other populations belong to the variation ranges ofC. breve, C. minutissimum, C. michailovskoense, andC. muscicola v.kashmiriense.— (6)Gomphosphaerioideae-species: Fifty eight populations (9 species) of the subfamilyGomphosphaerioideae (Microcystaceae, Chroococcales) from freshwater biotopes of Cuba were evaluated: Four planktic species with a probable cosmopolitan distribution were found (Coelosphaerium kuetzinginianum, C. minutissimum, Snowella lacustris andCoelomoron pusillus), and from the genusCoelomoron Buell two new species,C. microcystoides andC. vestitus were described. The tropical planktic speciesWoronichinia fremyi forms occasionally water blooms in larger reservoirs. Two tropical species from the genusGomphosphaeria Kütz, were recognized,G. multiplex (Nyg.) c. n. andG. semen-vitis sp. n.