Molecular phylogenies and mating study data in Polyporus with special emphasis on group “Melanopus” (Basidiomycota)

“Melanopus” is an unranked infrageneric group within Polyporus, a genus comprising wood-decaying homobasidiomycetes. This study compiles new information on the mating systems, phylogeny, and geographic distribution of the group. We report tetrapolar mating systems in “Melanopus,” as well as in the more distantly related Polyporus umbellatus. “Melanopus” is addressed using internal transcribed spacer (ITS) rDNA sequence data, comparing resolving power of several phylogenetic methods and depths of sequence information, including recoded secondary structure data informed by the primary sequence data. The latter, inferred structure of the ITS2 rRNA was insufficient in phylogenetic reconstruction on its own. Intercollection compatibility studies showed Polyporus varius collections from both sides of the Atlantic to be intercompatible, the same was found for Polyporus tubaeformis collections from California and Scotland. Molecular analysis supports P. tubaeformis conspecifity of Scottish and Californian collections with a Norwegian collection. Several other herbarium specimens inaccessible to successful PCR and sequencing were redetermined as P. tubaeformis by morphological characters. This improved on the current knowledge of distribution of the species, tentatively adding Idaho, North Carolina, and Germany’s Mecklenburg-Western Pomerania.Electronic supplementary material Supplementary material is available in the online version of this article at and is accessible for authorized users.     

Polyporus phyllostachydis sp. nov. with notes on other rhizophilic species of Polyporus (Basidiomycota,Polyporaceae)

Polyporus phyllostachydis is described and illustrated as a new species. This species is characterized by its occurrence on bamboo roots, the small and centrally stipitate basidiocarps, the white pileus, usually becoming darker from the center at maturity, and the cylindrical stipe with a distinct crust. Morphological characters of the present species were compared with those of P. cryptopus and P. rhizophilus, other rhizophilic species of the genus. Polyporus cryptopus and P. rhizophilus are morphologically distinct by contextual texture, basidiospores, and hyphae, and possibly represent two distinct species. Contribution no. 205, Laboratory of Plant Parasitic Mycology, Graduate School of Life and Environmental Sciences, University of Tsukuba, Japan     

First record of <Emphasis Type="Italic">Pluteus chrysophaeus</Emphasis> and reexamination of <Emphasis Type="Italic">Pluteus leoninus</Emphasis> from Japan

Pluteus chrysophaeus is described as a new record for Japanese mycobiota. Pluteus leoninus, reported for the first time from Japan by Imai (1938), probably represents P. chrysophaeus. The new Japanese specimens of P. leoninus is redescribed and illustrated.     

Phellinus setifer sp. nov. andP. acontextus, two noteworthy polypores from temperate areas of Japan, with notes on their allies

Type examination ofTrametes gilvoides revealed that it is distinct from the fungus hitherto known asPhellinus gilvoides in Japan.Phellinus setifer sp. nov. is described for the Japanese materials. This species is characterized by effusedreflexed basidiocarps with strigose pileus surface, often dentate dissepiments, subulate setae, and cylindrical basidiospores.Phellinus acontextus, known only from the type material collected in Nepal, is newly reported from Japan. This species is characterized by sessile and often pendent basidiocarps with multisulcate pileus surface, very thin context, lack of setae, and dark-colored basidiospores. Cultural characters of the two species are also described.Phellinus acifer comb. nov. is proposed.Phellinus contiguus andP. ferreus are newly reported from Japan.     

The first report of two species of <Emphasis Type="Italic">Polyporus</Emphasis> (Polyporaceae,Basidiomycota) from South Korea

Based on morphological examination, two species of Polyporus, P. dictyopus, and P. tuberaster, were identified, which constitutes the first record of these species in South Korea. To confirm their affinity within the genus Polyporus, the phylogenetic relationships of Polyporus and allied genera were established from nuclear large subunit ribosomal DNA (nLSU rDNA) sequences, and a morphological diagnostic key is presented to clarify the Korean species of Polyporus.     

Materials forPythium flora of Japan VIII Two species ofPythium:P. pyrilobum andP. oligandrum

Two species ofPythium (P. pyrilobum, P. oligandrum) having spherical sporangia with complex subglobose elements were isolated from the crown of creeping bentgrass [Agrostis palustris (cv. Penncross)] and from vegetable field soil, respectively. They are reported for the first time in Japan.     

The tropical <Emphasis Type="Italic">Polyporus tricholoma</Emphasis> (Polyporaceae) — Taxonomy,phylogeny, and the development of methods to detect cryptic species

The stipitate pore-bearing fungus Polyporus tricholoma (Polyporus infrageneric group Polyporellus) is commonly reported from Mesoamerica and more rarely from the palaeotropics. Collections from Puerto Rico, Mexico, and Costa Rica did not differ morphologically, but their monokaryotic cultures revealed the existence of three interINcompatibility groups. These putative cryptic species exist sympatrically in Costa Rica. Sequencing, restriction enzyme digestion, and specific primers targeting the ITS region of nuclear ribosomal DNA (ITS 1-5.8S-ITS2) could only partly be used for detecting intercompatibility groups. Heterogeneity within the rDNA repeat was observed. Molecular evidence supports the existence of a close relative in Australia.     

Stromatinia cryptomeriae sp. nov., the teleomorph ofGloeosporidina cryptomeriae causing twig blight of Japanese cedar

A new species,Stromatinia cryptomeriae, is described based on a specimen collected in Iwate Prefecture, Japan. It was found on fallen dead branches and twigs of Japanese cedar,Cryptomeria japonica. The morphology of isolates on potato-dextrose agar (PDA), which were obtained from single ascospores ofS. cryptomeriae, was identical withGloeosporidina cryptomeriae, the causal fungus of Japanese cedar twig blight. In an inoculation test using single ascospore isolates, many minute black spots (sclerotioid bodies; sclerotules) and acervuli ofG. cryptomeriae were formed on the necrotic lesions, which developed into typical symptoms of Japanese cedar twig blight. These results show thatStromatinia cryptomeriae is the teleomorph ofG. cryptomeriae. On PDA, the fungus grew over a range of about 1 to 25°C, with the optimum growth at about 15–20°C.     

Floristic study of <Emphasis Type="Italic">Geastrum</Emphasis> in Japan: three new records for Japanese mycobiota and reexamination of the authentic specimen of <Emphasis Type="Italic">Geastrum minus</Emphasis> reported by Sanshi Imai

Geastrum berkeleyi, G. fornicatum, and G. minimum are newly recorded from Japan. A peristome of G. fornicatum has hitherto been described as indistinct, whereas the Japanese specimens have a well-delimited, fibrillose peristome. Geastrum minus, reported for the first time from Japan by Sanshi Imai, represents G. quadrifidum. Macroscopic and microscopic features of those four taxa are described and illustrated based on Japanese specimens.     

Microfungi on the Pandanaceae:Polytretophora macrospora sp. nov.

Polytretophora macrospora is introduced based on specimens from two species ofPandanus in Seychelles. The new species is compared with currently accepted species. A key and a comparative synopsis toPolytetophora species are provided. Numerous specimens ofP. calcarata, collected on members of the Pandanaceae from Australia, Fiji, Hong Kong, Malaysia, New Caledonia, Palau, Philippines, Seychelles and Solomon Islands are also reported, along withP. dendroidea onPandanus sp. from Malaysia.     

Addition and reexamination of Japanese species belonging to the genusCercospora and allied genera I. Collections from Nansei-Islands (1)

In the first report of the present series, six species collected from Nansei Islands were discussed. Of these, one found onElaeocarpus japonica was described as a new species,Pseudocercospora elaeocarpicola. Pseudocercospora plumeriae onPlumeria rubra was transferred from the genusCercospora and added to the Japanese fungous flora, together withCercosporidium bougainvilleae onBougainvillea spectabilis. One of the three remaining species,Pseudcercospora punicae onPunica granatum was newly recorded from Nansei Islands. On the other two species, namelyP. circumscissa andP. fukuokaensis, some additional notes concerning distribution and host range were described.     

Notes on Japanese Lycoperdaceae. 1: <Emphasis Type="Italic">Lycoperdon umbrinoides</Emphasis>, a tropical fungus newly found in Japan

Lycoperdon umbrinoides, a tropical fungus previously known from tropical Africa and southern Europe, is reported here for the first time from Kanagawa Prefecture, central Japan. Macroscopic and microscopic features of the Japanese material and its chorological note are given.     

Notes onLaboulbenia coneglanensis (Ascomycetes, Laboulbeniales) in Japan

Laboulbenia coneglanensis isolated from Japanese harpaline carabids is described and photographed. It is compared morphologically withL. flagellata from Japan and Europe, which is similar in appearance. The most important difference between the two species is in antheridial character and host range. Other characters such as coloration, perithecial shape, especially the shape of the perithecial apex, and size of ascospores are also useful for distinction.Laboulbenia ophoni var.dilatata described by Maire (1920) is regarded as a synonym ofL. coneglanensis.     

The genus Phyllomyza Fallén (Diptera: Milichiidae) from Japan, with descriptions of four new species

The Japanese species of the genus Phyllomyza Fallén are revised. Four new species, Phyllomyza kanmiyai sp. nov., P. amamiensis sp. nov., P. proceripalpis sp. nov. and P. japonica sp. nov., are described and illustrated. P. securicornis Fallén is recorded from Japan for the first time. A key to the Japanese species of Phyllomyza is presented.     

Plumatella mukaii,a new phylactolaemate bryozoan from Asia and South America

A new freshwater bryozoan species, Plumatella mukaii, is recognized from eastern Asia and western South America. Colonies and statoblasts both bear a resemblance to P. emarginata, and have often been confused with that species, especially in Japanese studies. Floatoblasts and sessoblasts are enclosed within a tough, wrinkled, membrane which resists removal by mechanical means. Floatoblasts are generally smaller than those of P. emarginata, but display unusually high variability in their overall dimensions. The species has been reported from both lentic and lotic habitats. In Asia, the range includes Japan, Korea, China, India and Indonesia. It has most recently also been found at several sites in Chile. The recognition of P. mukaii narrows the previously reported range of P. emarginata and invites a re-inspection of that species worldwide.     

Mycosphaerella buna sp. nov. with aPseudocercospora anamorph isolated from the leaves of Japanese beech

A species ofMycosphaerella with aPseudocercospora anamorph was collected on overwintered fallen leaves of Japanese beech,Fagus crenata. Based on comparison of morphology withMycosphaerella species on Fagaceae, the fungus was newly described asMycosphaerella buna. ThePseudocercospora anamorph derived from a single ascospore of the fungus was morphologically identical to an endophytic anamorph isolated from asymptomatic living leaves of Japanese beech. Contribution No. 150, Laboratory of Plant Parasitic Mycology, Institute of Agriculture and Forestry, University of Tsukuba     

Taxonomy ofPuccinia species causing rust diseases on sugarcane

A taxonomic revision ofPuccinia species causing rust diseases on sugarcane was conducted to clarify their morphological characteristics. Specimens including previously reported species,Puccinia melanocephala, P. kuehnii andPuccinia sp.sensu Muta, 1987, were collected in Japan and the Philippines and borrowed from various herbaria worldwide. Morphological characteristics of these specimens were examined under light and scanning electron microscopes. Comparative morphological studies of the specimens showed that rust fungi infecting sugarcane could be classified into two species,Puccinia melanocephala andP. kuehnii. Puccinia sp.sensu Muta was morphologically identical withP. kuehnii. Results of this study corroborate previous phylogenetic analysis results of D1/D2 regions of LSU rDNA gene. Contribution No. 157, Laboratory of Plant Parasitic Mycology, Institute of Agriculture and Forestry, University of Tsukuba