Phylogeny of Phaeomollisia piceae gen. sp. nov.: a dark, septate, conifer-needle endophyte and its relationships to Phialocephala and Acephala

Dark, septate endophytes (DSE) were isolated from roots and needles of dwarf Picea abies and from roots of Vaccinium spp. growing on a permafrost site in the Jura Mountains in Switzerland. Two of the isolates sporulated after incubation for more than one year at 4 °C. One of them was a hitherto undescribed helotialean ascomycete Phaeomollisia piceae gen. sp. nov., the other was a new species of Phialocephala, P. glacialis sp. nov. Both species are closely related to DSE of the Phialocephala fortinii s. lat.-Acephala applanata species complex (PAC) as revealed by phylogenetic analyses of the ITS and 18S rDNA regions. Morphologically dissimilar fungi, such as Vibrissea and Loramyces species, are phylogenetically also closely linked to the new species and the PAC. Cadophora lagerbergii and C. (Phialophora) botulispora are moved to Phialocephala because Phialocephala dimorphospora and P. repens are the closest relatives. Several Mollisia species were closely related to the new species and the PAC according to ITS sequence comparisons. One DSE from needles of Abies alba and one from shoots of Castanea sativa formed Cystodendron anamorphs in culture. Their identical 18S sequences and almost identical ITS sequences indicated Mollisia species as closest relatives, suggesting that Mollisia species are highly euryoecious.     

Molecular characterization and enzymatic activity of laccases in two Pleurotus spp. with different pathogenic behaviour

Pleurotus eryngii and P. ferulae, two species belonging to the P. eryngii complex, synthesize laccases, ligninolytic enzymes that play a role in the host-pathogen interaction in the first step of infection. Ecological studies have shown that although both fungi have been recognized as saprophytes, P. eryngii weakly pathogenic when colonizing the roots and stems of Eryngium campestre, whereas P. ferulae is mostly pathogenic to Ferula communis. The paper describes the genomic organization of four putative laccase genes (lac1, lac2, lac3, and lac5-like gene; gene names were assigned on the basis of sequence homologies) of P. eryngii and P. ferulae. The mRNA expression and enzymatic activity of the laccases were analysed under culture conditions where a source of lignin (wheat bran) or lyophilized roots of E. campestre or F. communis were present. These experiments indicated that the four lac-like genes were differentially regulated in the two mushrooms. Specifically, the addition of the lyophilized roots of the respective host plant to the culture media induced an advance in the mRNA expression of the four lac-like genes and a seven-fold higher total laccase activity in P. ferulae than in P. eryngii. The results obtained are discussed in relation to the possible role of laccases in the interaction of P. eryngii and P. ferulae with their respective host.     

盐胁迫下荒漠共生植物红砂与珍珠的根茎叶中离子吸收与分配特征

西北荒漠地区C3小灌木红砂(Reaumuria soongorica)和C4半灌木珍珠猪毛菜(Salsola passerina)在特定环境下混生在一起,分布面积广阔。以采自腾格里沙漠边缘荒漠地带的天然野生珍珠猪毛菜和红砂群落的幼苗为材料,经0、100、200、300、400mmol/L NaCl盐溶液共同胁迫10 d,检测它们的含水量、主要矿质离子在根茎叶的含量与分布,揭示二者耐盐的共生协同的离子平衡适应机制。试验结果发现,珍珠猪毛菜叶片具有"吸钾排钠的"的耐盐特征,红砂叶片具备"吸钠排钾"的特征,吸收利用无机矿质离子具备互补效应。二者耐盐Cl、Ca和Si离子吸收与累积能力存在很大差异:随着盐胁迫程度加剧,红砂的根茎叶中Cl离子含量持续增加,并且为珍珠猪毛菜的2—5倍;珍珠猪毛菜根中Ca离子含量为红砂的2—3倍,但含量变化不显著;红砂根中Si离子含量迅速降低后稳定,并且是珍珠猪毛菜根的3—5倍,其他器官变化差异较小。因此,红砂与珍珠猪毛菜的共培养盐胁迫下根中吸收的离子侧重不同,红砂以Na、Cl、Si为主,珍珠猪毛菜以K、Ca为主。随着盐胁迫的程度加强,离子选择吸收系数S k,Na的变化趋势降低,表明二者叶部对Na的选择性减小,K的选择性吸收积累增大,增强了它们的抗盐性,最终使叶片所受盐害减小。总之红砂与珍珠猪毛菜共生的耐盐离子稳态机制显著不同,离子吸收与分布具有互补互利的效应。     

Influence of Concomitant Pratylenchus brachyurus and Meloidogyne spp. on Root Penetration and Population Dynamics

Populations of Pratylenchus brachyurus on cotton were increased significantly in the presence of either Meloidogyne incognita or M. arenaria.This occurred with either simultaneous inoculation or prior invasion by M. incognita. P. brachyurus penetrated cotton roots previously invaded by, or simultaneously inoculated with, M. incognita, as well as, or better than, in the absence of M. incognita. Prior invasion by M. incognita, however, suppressed P. brachyurus populations on tomato, while it had no effect on alfalfa and tobacco. Populations of M. incognita on cotton were generally inhibited by the presence of P. brachyurus. Simultaneous inoculation with, or previous invasion by, P. brachyurus also inhibited root penetration by M. incognita. These findings emphasize the importance of host susceptibility in the study of concomitant nematode populations.     

Iridoids from the roots of Triosteum pinnatifidum

A chemical investigation of the roots of Triosteum pinnatifidum led to the isolation of 10 iridoids, elucidated as triohimas A–C, naucledal, secologanin dimethyl acetal, grandifloroside, sweroside, loganin, vogeloside and (E)-aldosecologanin. Most of the compounds were derived from loganin or secologanin with a glucose moiety at C-1 position. The results indicate a close relationship between the two genera Triosteum and Lonicera, and support the viewpoint that the iridoids derived from loganin or secologanin could be the chemotaxonomic markers of the Caprifoliaceae family.     

Sequestration of polyacetylenes by the parasite Orobanche hederae (Orobanchaceae) from its host Hedera helix (Araliaceae)

Orobanche hederae Duby and its host Hedera helix L. were collected in the North Italian Trentino-Südtirol region and analyzed for their content of polyacetylenes. Both, the host plant (Hedera) and the parasite (Orobanche) contained the polyacetylene falcarinol and two of its dehydroderivatives. The contents of polyacetylenes in Hedera decrease from roots via stems to leaves and contents in Orobanche are only about one-tenth of the contents in the Hedera roots it parasites on. Moreover, relative contents of the more polar polyacetylenes are higher in Orobanche than in Hedera, implying a bias toward the sequestration of more polar compounds.     

Three-dimensional analysis of mandibular dental root morphology in hominoids

Although often preserved in the fossil record, mandibular dental roots are rarely used for evolutionary studies. This study qualitatively and quantitatively characterizes the three-dimensional morphology of hominoid dental roots. The sample comprises extant apes as well as two fossil species, Khoratpithecus piriyai and Ouranopithecus macedoniensis. The morphological differences between extant genera are observed, quantified and tested for their potential in systematics. Dental roots are imaged using X-ray computerized tomography, conventional microtomography and synchrotron microtomography. Resulting data attest to the high association between taxonomy and tooth root morphology, both qualitatively and quantitatively. A cladistic analysis based on the dental root characters resulted in a tree topology congruent with the consensus phylogeny of hominoids, suggesting that tooth roots might provide useful information in reconstructing hominoid phylogeny. Finally, the evolution of the dental root morphology in apes is discussed.     

盐胁迫对2种栎树苗期生长和根系生长发育的影响

以低浓度(50 mmol/L)和高浓度(150 mmol/L)NaCl处理弗吉尼亚栎(Quercus virginiana)和麻栎(Quercus acutissima)1年生幼苗,研究了2种栎树在盐胁迫下的生长、对盐分的敏感性和耐受性及其根系形态学参数变化以及根系对盐离子的吸收与积累。结果表明,高浓度盐胁迫明显抑制了2种栎树地上部生物量的积累(P0.05),而低浓度盐胁迫对弗吉尼亚栎地上部干重的影响不明显,但显著抑制了麻栎地上部干重(P0.05);2种栎树的根冠比在盐胁迫下呈增加趋势,特别是在高浓度盐胁迫下,2种栎树的根冠比明显增加(P0.05),盐胁迫下增加生物量在根部的分配是植物应对盐胁迫的方式之一。2种栎树根部生物量积累在盐胁迫下变化不明显,但2种栎树根系形态学参数在盐胁迫下的响应不同,弗吉尼亚栎根系总长度、总表面积和总体积在盐胁迫下均有不同程度增加,特别是在低浓度盐胁迫下,根系形态学参数明显增加(P0.05),但麻栎根系形态学参数有下降趋势,但与对照相比变化不明显;通过对不同径级根系总长的分析发现,弗吉尼亚栎根系总长度的增加主要是由于直径小于2 mm的细根总长的增加,细根长度的增加对于植物吸收水分和营养物质具有重要意义;通过对Na+和Cl-在根系的含量分析表明,盐胁迫下2种栎树根系盐离子的积累均有明显增加,但弗吉尼亚栎根系盐离子的含量在低浓度和高浓度盐胁迫下的差异不明显,而麻栎在高浓度盐胁迫下根系盐离子的含量明显高于弗吉尼亚栎。综合2种栎树盐胁迫下的生物量分配策略和根系形态学响应以及盐离子的积累规律,证明2种栎树尽管在生物量分配策略方面具有相同的特点,但根系的响应策略截然不同,弗吉尼亚栎在盐胁迫下能够扩大根系吸收范围,维持较高的K+/Na+比值,而麻栎在盐胁迫下根系由于吸收过多的盐离子,导致根系的生长发育受到抑制,影响了根系在逆境中的分布范围,从而在一定程度上避免了进一步的盐害。     

Flower removal increases rhizome mass in natural populations of Alstroemeria aurea (Alstroemeriaceae)

Plant architecture and phenotypic plasticity under natural conditions remain little known for many rhizomatous species. This study evaluates, in situ, the plastic responses of Alstroemeria aurea plants from three Patagonian populations to flower or flowering-shoot removal. The size and architecture of treated and untreated plants were assessed. Nutrient contents (N, P and K) were evaluated for rhizomes and roots developed in two successive years. Those plants that were deprived of their inflorescences developed, on average, a heavier rhizome than both control plants and plants from which flowering shoots had been removed. Neither of the two treatments applied altered the number of metamers or the branching pattern of the rhizomes. The contents of N, P and K were higher in rhizomes than in roots. In summer, nutrients were more concentrated in inflorescences and the new rhizome segment than in the rhizome segment developed in the previous year. The idea that fruiting failure in A. aurea promotes resource re-assignment from aerial shoots to rhizomes without altering the architecture of plants is supported. The development of the underground portion of aerial shoots in late summer-autumn allows A. aurea plants to take full advantage of short growth periods, but would impose a limit to plasticity.     

Endoparasitic Nematodes in Maize Roots in the Western Transvaal as Related to Soil Texture and Rainfall

Eight endoparasitic nematode species were recovered from 170 maize root samples in western Transvaal, Republic of South Africa. Pratylenchus zeae had the highest average population density (17,454/5 g roots), followed by P. neglectus (5,827/5 g roots), P. penetrans (5,617/5 g roots), P. brachyurus (3,060/5 g roots), Meloidogyne incognita plus M. javanica (301 juveniles/5 g roots), P. crenatus (130/5 g roots), and Rotylenchutus parvus (64/5 g roots). The 17 reasonably homogeneous farming areas (RHFA) surveyed could be ranked on the basis of the incidence of the prevalent nematode species. A positive relationship was found between the incidence of P. brachyurus and R. parvus and long-term average annual rainfall. The incidence of P. penetrans and the Meloidogyne spp. was positively related to a combination of sand percentage and long-term average annual rainfall.     

Effect of cadmium ion excess over cell structure and functioning of Zea mays and Hordeum vulgare

Zea mays (maize) and Hordeum vulgare (barley) plants were analyzed in order to study the variation in response to Cadmium (Cd) toxicity based on development of leaf symptoms, effect in dry matter production, Cd uptake, lipid peroxidation and effect on cell ultrastructure in leaves and roots. Cd accumulation in roots of Z. mays and H. vulgare was 18–50 times higher than in the aerial parts. Malondialdehyde (MDA) content was more affected in the roots of both Z. mays and H. vulgare than in shoots (60 and 56–51 and 40%, respectively). At ultrastructural level, in Cd treated seedlings, a decline in the vacuolar content of barley roots cells and maize leaf cells was observed. Results corroborate that these gramineous crops can uptake and accumulate substantial amounts of Cd especially in roots. Therefore, H. vulgare and Z. mays could have a phytostabilization potential and thereafter could be tested in phytoremediation technologies.     

Cadmium distribution in the root tissues of solanaceous plants with contrasting root-to-shoot Cd translocation efficiencies

Root-to-shoot cadmium (Cd) translocation in Solanum torvum is lower than that of the eggplant Solanum melongena; therefore, grafting S. melongena onto S. torvum rootstock can effectively reduce the Cd concentration in eggplant fruits. We hypothesized that Cd transport in S. torvum roots is restricted in the path between the epidermis and xylem vessel; hence, we investigated the Cd distribution in the roots at the micron-scale. Elemental maps of Cd, Zn and Fe accumulation in S. melongena and S. torvum root sections were obtained by synchrotron micro X-ray fluorescence spectrometry. The Cd was localized in both the stele and the epidermis of the S. melongena root cross sections regardless of the distance from the root apex. In S. torvum root sections taken at 30 and 40 mm above the root apex, a higher abundance of Cd was found within the cells of the endodermis and pericycle. The results suggested that the symplastic uptake and xylem loading of Cd in S. torvum roots were restricted, and thereby, the Cd that was unable to be loaded into the xylem accumulated in the endodermis and in the pericycle. Because symplastic uptake differs only slightly between the two species, the difference in xylem loading would explain the comparatively lower Cd concentration in S. torvum shoots.     

Ethno-ecological evidence for Hydnora abyssinica occurring in Johannesburg and Durban traditional medicine markets

Large quantities of plants are traded annually in South Africa's traditional medicine or ‘muthi’ markets. A resource in high demand in the Faraday (Johannesburg) and Warwick (Durban) markets is uMavumbuka, a root holoparasite usually identified as either Hydnora africana Thunb. or Sarcophyte sanguinea Sparrm. subsp. sanguinea. However, rhizomes regularly observed in Faraday between 1994 and 2008 did not resemble either species, thereby suggesting that a third, and undocumented, species was being harvested. This was confirmed when the rhizomes were identified as H. abyssinica A.Br. by an American parasitic plant expert. An ethno-ecological study was initiated to verify its occurrence in selected muthi markets. The study further aimed to investigate the distribution of H. abyssinica through trader interviews, host species localities and some previously misidentified herbarium specimens. The study revealed that H. abyssinica was the only uMavumbuka species present in Faraday and Warwick in 2009. Furthermore, the rhizomes were being harvested in KwaZulu-Natal—an area not previously known to be part of its distribution range. Re-evaluated herbarium vouchers and recent photographs taken in the Kruger National Park have confirmed that H. abyssinica occurs in KwaZulu-Natal, Limpopo, Mpumalanga, Gauteng and Swaziland and hence eastern southern Africa. Fragments of Acacia xanthophloea Benth. roots were identified on 93% of the samples that had host roots attached, and we suspect that H. abyssinica follows the distribution of A. xanthophloea in suitable habitats north from KwaZulu-Natal and adjoining the South African border with Swaziland and Mozambique. Acacia karroo Hayne and A. grandicornuta Gerstner have also been positively identified as host species in South Africa from herbarium records. Plant harvesters in the markets cited the common names of several other species that uMavumbuka “grows under” that may be identified as hosts to H. abyssinica in the future. The collection of specimens in areas identified by the harvesters and in areas of suitable habitat is important to verify the occurrence, distribution and habitat of H. abyssinica in eastern southern Africa.     

Salinity increases the triterpenoid content of a salt secretor and a non-salt secretor mangrove

The present study describes the effect of salinity on the triterpenoid content of the salt secretor mangrove Avicennia marina and the non-secretor Rhizophora stylosa. Mangrove seedlings were grown for eight months in 0%, 0.5%, 1.5%, 2.0% and 3.0% salt concentration. The growth of both species was increased by salt with maximal stimulation at 1.5%, and this elevation appeared to be attenuated by increasing the salt concentration above 1.5%. The triterpenoid compositions of three types of chemical structures, lupane (lupeol, lupenone), oleanane (β-amyrin, taraxerol, germanicol), and ursane (α-amyrin), were studied. In addition, the phytosterol components campesterol, stigmasterol and β-sitosterol were analyzed. The total triterpenoid contents in the roots and leaves of A. marina for the 0% group were 87.0 and 66.2 μg g⁻¹, respectively, and increased significantly to 173.1 and 142.6 μg g⁻¹ with 3% salinity. The higher salinity also significantly increased the total concentration of phytosterols in the leaves and roots of this species. A similar increase in the concentration of both triterpenoids and phytosterols was observed in the roots and leaves of R. stylosa with increasing salt concentration. Thus, the triterpenoid concentration was increased by salinity in the roots and leaves of both A. marina and R. stylosa irrespective of their differences in salt management by salt excretion or by a non-excretion mechanism. Comparison of the triterpenoid concentration in four species of growing mangrove seedlings revealed a correlation between the total triterpenoid content and the salt tolerance based on the habitat zonation on Iriomote Island. A. marina thrives closest to sea and had the highest content of triterpenoids (173.1 μg g⁻¹ in 3% salt group). Therefore, it is likely that the triterpenoid content play an important role in mangrove plants for protection from salinity in both salt-secretors and non-secretors.     

Influence of Metalaxyl on Three Nematodes of Citrus

Metalaxyl significantly reduced population of Pratylenchus coffeae, Radopholus similis, and Tylenchulus semipenetrans in roots of Citrus limon (rough lemon) under greenhouse conditions. Postinoculation treatment of rough lemon seedlings was not as effective i n reducing nematode populations as was treatment before inoculation. Fewer nematodes infected metalaxyl-treated roots than nontreated roots. However, incubation of nematodes in metalaxyl did not inhibit nematode motility or their ability to locate and infect roots. Cellular responses to nematode injection differed between treated and nontreated tissues. Metalaxyl appeared to confer nematode contraol by modifying citrus roots such that a normally susceptible rootstock became tolerant.     

Phaseolus vulgaris seed-borne endophytic community with novel bacterial species such as Rhizobium endophyticum sp. nov.

The bacterial endophytic community present in different Phaseolus vulgaris (bean) cultivars was analyzed by 16S ribosomal RNA gene sequences of cultured isolates derived from surface disinfected roots and immature seeds. Isolated endophytes from tissue-macerates belonged to over 50 species in 24 different genera and some isolates from Acinetobacter, Bacillus, Enterococcus, Nocardioides, Paracoccus, Phyllobacterium, and Sphingomonas seem to correspond to new lineages. Phytate solubilizing bacteria were identified among Acinetobacter, Bacillus and Streptomyces bean isolates, phytate is the most abundant reserve of phosphorus in bean and in other seeds. Endophytic rhizobia were not capable of forming nodules. A novel rhizobial species Rhizobium endophyticum was recognized on the basis of DNA–DNA hybridization, sequence of 16S rRNA, recA, rpoB, atpD, dnaK genes, plasmid profiles, and phenotypic characteristics. R. endophyticum is capable of solubilizing phytate, the type strain is CCGE2052 (ATCC BAA-2116; HAMBI 3153) that became fully symbiotic by acquiring the R. tropici CFN299 symbiotic plasmid.     

Fungal genes related to calcium homeostasis and signalling are upregulated in symbiotic arbuscular mycorrhiza interactions

Fluctuations in intracellular calcium levels generate signalling events and regulate different cellular processes. Whilst the implication of Ca²⁺ in plant responses during arbuscular mycorrhiza (AM) interactions is well documented, nothing is known about the regulation or role of this secondary messenger in the fungal symbiont. The spatio-temporal expression pattern of putatively Ca²⁺-related genes of Glomus intraradices BEG141 encoding five proteins involved in membrane transport and one nuclear protein kinase, was investigated during the AM symbiosis. Expression profiles related to successful colonization of host roots were observed in interactions of G. intraradices with roots of wild-type Medicago truncatula (line J5) compared to the mycorrhiza-defective mutant dmi3/Mtsym13. Symbiotic fungal activity was monitored using stearoyl-CoA desaturase and phosphate transporter genes. Laser microdissection based-mapping of fungal gene expression in mycorrhizal root tissues indicated that the Ca²⁺-related genes were differentially upregulated in arbuscules and/or in intercellular hyphae. The spatio-temporal variations in gene expression suggest that the encoded proteins may have different functions in fungal development or function during symbiosis development. Full-length cDNA obtained for two genes with interesting expression profiles confirmed a close similarity with an endoplasmic reticulum P-type ATPase and a Vcx1-like vacuolar Ca²⁺ ion transporter functionally characterized in other fungi and involved in the regulation of cell calcium pools. Possible mechanisms are discussed in which Ca²⁺-related proteins G. intraradices BEG141 may play a role in mobilization and perception of the intracellular messenger by the AM fungus during symbiotic interactions with host roots.     

A quantitative comparison of two extremes in chaparral shrub phenology

We quantitatively compared phenology and water relations of a fully deciduous shrub, Styrax officinalis, and an evergreen shrub, Arctostaphylos glauca, in shared microsites in a sandstone outcrop in southern California during a multi-year drought. Pre-dawn xylem pressure potentials, Ψ_pd, were similar for the two species during most months of 2 years, but occasional differences and watering experiment results suggest S. officinalis may have phreatophytic roots that tap water in deep rock cavities and joint traces, while A. glauca may have primarily shallow roots. Neither species varied in maximum or minimum Ψ_pd between years of very different rainfall totals. Twig elongation and leaf production of S. officinalis began earlier during spring, and its leaves matured more quickly and more synchronously than A. glauca. Leaves lived a mean of 180 days for S. officinalis and 849 days for A. glauca. Leaf life spans varied among years in both species. S. officinalis leaf senescence occurred mostly in August and September and was not discernibly related to Ψ_pd or drought avoidance. A. glauca leaf senescence occurred throughout the year, but especially coincided with leaf production. In A. glauca most senescence occurred at the beginning of a leaf cohort's third growing season, but numbers of retained older leaves increased during 4 years of drought. Timing of twig elongation and leaf and flower production appeared to be related to current rainfall, but amount of twig growth and numbers of leaves and flowers produced appeared to be related to rainfall of the previous year or years for S. officinalis and, more complexly, A. glauca. Because of an interrupted pattern of flower production, number of flowers produced by A. glauca may be responsive to rainfall amounts during two environmental periods. Morphological differences, including much higher above ground allocation, many more leaves/twig, lower allocation to stem mass, and longer duration of leaves/year in A. glauca, are probably responsible for A. glauca having >6 times more above ground biomass per plant than S. officinalis. During the multi-year drought S. officinalis changed little, indicating either superb adaptation or growth pattern rigidity, while A. glauca underwent extensive phenological and morphological changes, indicating either stress or adaptive flexibility.