Morphological and trophic specialization in a subterranean amphipod assemblage

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Niche overlap and diet composition of three sympatric coastal dolphin species in the southwest Atlantic Ocean

Sympatric species are expected to differ in ecological requirements to minimize niche overlap and avoid competition. Here we assess the trophic interactions among three coexisting dolphin species from southern Brazil: the franciscana dolphin (Pontoporia blainvillei), the Guiana dolphin (Sotalia guianensis), and the Lahille's bottlenose dolphin (Tursiops truncatus gephyreus). We evaluated temporal variation in carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope values of bone collagen to examine potential dietary shifts resulting from increased fishing activity over the past three decades. We estimated the degree of niche overlap among these species and the contribution of potential prey sources to their diet. δ¹⁵N values were consistent among species and across years, while δ¹³C values increased for Guiana dolphins and decreased for bottlenose dolphins, suggesting changes in diet and/or foraging habitats through time. The similar δ¹³C and δ¹⁵N values and the high niche overlap between Guiana and bottlenose dolphins indicate that these species are primarily feeding on demersal prey. The franciscana diet is primarily composed of pelagic prey, resulting in a lower niche overlap in comparison with the other dolphin species. Our study provides further information about the foraging ecology of this unique dolphin community in southern Brazil with implications for its management and conservation.     

Interpopulation trophic niches and ontogenetic shifts of a mangrove fish predator

Fish trophic niches reflect important ecological interactions and provide insight into the structure of mangrove food webs. Few studies have been conducted in mangrove fish predators to investigate interpopulation trophic niches and ontogenetic shifts. Using stable isotope analysis and two complementary approaches, the authors investigated trophic niche patterns within and between two ontogenetic groups (juveniles and sub-adults) of a generalist predator (Acentrogobius viridipunctatus) in four mangroves with heterogeneous environmental conditions (e.g., tidal regimes, salinity fluctuations and mangrove tree community). The authors hypothesized that the trophic niche between populations would vary regionally and trophic position would increase consistently from juvenile to sub-adult stages. The results revealed that both δ¹³C and δ¹⁵N values varied greatly across populations and between ontogenetic groups, and complex spatio-ontogenetic variations were expressed by Layman's metrics. They also found some niche separation in space, which is most likely related to resource availability in spatially diverse ecosystems. In addition, trophic niche position increased consistently from juveniles to sub-adults, indicating ontogenetic feeding shifts. The isotopic plasticity index and Fulton's condition index also showed significant spatial-ontogenetic variation, which is consistent with optimal foraging theory. The findings highlight that trophic plasticity has a high adaptive value for mangrove fish predators in dynamic ecosystems.     

Stable isotope analysis indicates a lack of inter- and intra-specific dietary redundancy among ecologically important coral reef fishes

Parrotfish are critical consumers on coral reefs, mediating the balance between algae and corals, and are often categorised into three functional groups based on adult morphology and feeding behaviour. We used stable isotope analysis (δ¹³C, δ¹⁵N) to investigate size-related ontogenetic dietary changes in multiple species of parrotfish on coral reefs around Zanzibar. We compared signatures among species and functional groups (scrapers, excavators and browsers) as well as ontogenetic stages (immature, initial and terminal phase) within species. Stable isotope analysis suggests that ontogenetic dietary shifts occurred in seven of the nine species examined; larger individuals had enriched δ¹³C values, with no relationship between size and δ¹⁵N. The relationship between fish length and δ¹³C signature was maintained when species were categorised as scrapers and excavators, but was more pronounced for scrapers than excavators, indicating stronger ontogenetic changes. Isotopic mixing models classified the initial phase of both the most abundant excavator (Chlorurus sordidus) as a scraper and the immature stage of the scraper Scarus ghobban (the largest species) as an excavator, indicating that diet relates to size rather than taxonomy. The results indicate that parrotfish may show similar intra-group changes in diet with length, but that their trophic ecology is more complex than suggested by morphology alone. Stable isotope analyses indicate that feeding ecology may differ among species within functional groups, and according to ontogenetic stage within a species.     

Stable Isotope Trophic Shifts in White-Tailed Deer

Abstract Differences between diet and tissue isotope values known as trophic shifts (Δδ¹³C and Δδ¹⁵N) occur during digestion and assimilation of consumed food. Consideration of trophic shifts is essential when using stable isotopes for dietary reconstruction but has received little attention for cervids. Therefore, our purpose was to determine C and N trophic shifts in tissues of captive white-tailed deer (Odocoileus virginianus) fed corn and alfalfa in known amounts over a 4-month period. Antler has also received limited consideration for use in dietary reconstruction, thus, we analyzed tissue to expose variation among locations along the main beam and between antler components. We collected antler, hair, red blood cells (RBCs), and serum at the end of the feeding trial and analyzed them to determine C (δ¹³C) and N (δ¹⁵N) isotope values. Trophic shifts occurred between diet and all tissues for both isotopes with mean Δδ¹³C = 1.19 ± 2.23% and Δδ¹⁵N = 4.93 ± 0.74%. Antler trophic shifts were greater than those in all other tissues for δ¹³C, whereas antler and RBCs shared similar trophic enrichment over diet but differed from hair and serum for Δδ¹⁵N. Trophic shift values were significantly related to diet in hair and serum for δ¹³C and antler and RBCs for Δδ¹⁵N. Isotope values for antler core and periphery plus antler locations along the main beam did not vary. Antler collagen significantly varied from whole antler for δ¹³C but not δ¹⁵N. Our findings provide mean trophic shift values by tissue that can be used for dietary reconstruction in the study and management of cervids.     

The influence of climate and habitat on stable isotope signatures and the isotopic niche of nestling White‐headed Woodpeckers (Dryobates albolarvatus)

The majority of landbird species feed their nestlings arthropods and variation in arthropod populations can impact reproductive outcomes in these species. Arthropod populations in turn are influenced by climate because temperature affects survival and reproduction, and larval development. Thus, climate factors have the potential to influence many bird species during their reproductive phases. In this study, we assessed climate factors that impact the diet of nestling White‐headed Woodpecker (Dryobates albolarvatus), an at‐risk keystone species in much of its range in western North America. To do this, we measured stable isotope signatures (δ¹³C and δ¹⁵N) in 152 nestlings across six years and linked variation in isotopic values to winter (December–February) and spring (June) precipitation and temperature using mixed effects models. We also explored habitat factors that may impact δ¹³C and δ¹⁵N and the relationship between δ¹⁵N and nest productivity. Last, we estimated isotopic niche width for nestlings in different watersheds and years using Bayesian standard ellipses, which allowed us to compare dietary niche width and overlap. We found that colder winter temperatures were associated with an increase in δ¹⁵N and δ¹⁵N levels had a weak positive relationship with nest productivity. We also found that sites with a more diverse tree community were associated with a broader isotopic niche width in nestlings. Our findings suggest that nestling diet is affected by climate, and under future warming climate scenarios, White‐headed Woodpecker nestling diet may shift in favor of lower trophic level prey (prey with lower δ¹⁵N levels). The impact of such changes on woodpecker populations merits further study.     

Stable isotope analysis indicates trophic differences among forest floor carabids in Japan

Differences in trophic niches among carabid beetles (Coleoptera: Carabidae) co‐occurring on the forest floors of warm temperate forests in central Japan were studied using carbon (δ¹³C) and nitrogen (δ¹⁵N) stable isotope analyses. Different carabid species showed similar δ¹⁵N values, which were higher than those of their possible invertebrate prey (herbivores and detritivores) collected from the litter layer, indicating that these species were consumers in the same trophic level. In contrast, δ¹³C values differed among carabid species, indicating interspecific differences in prey animals. The variation in the δ¹³C value was larger in summer than in autumn. In summer, δ¹³C values indicated that some carabids depended highly on either grazing (low δ¹³C values) or detrital sources (high δ¹³C values) within the food chain [Chlaenius posticalis Motschulsky and Haplochlaenius costiger (Chaudoir), respectively], although other species with intermediate δ¹³C values likely depended on both. The latter group of species comprised mostly two dominant genera (Carabus and Synuchus). Although congeners might have similar feeding habits, the stable isotope ratios indicated trophic niche differences between adults of different species and between adults and larvae of the same genus.     

Spatial,temporal, age,and sex related variation in the diet of South American sea lions in southern Chile

We analyzed spatial, temporal, and age/sex variation in the diet of the South American sea lions (SASL, Otaria byronia) in southern Chile via δ¹³C and δ¹⁵N isotope analysis, with emphasis on exotic farmed and feral salmonids as a source of prey for this generalist predator. Isotope mixing models show that the primary prey consumed by SASL were demersal and benthopelagic fishes. Individuals sampled in summer and in the outer coast had higher δ¹⁵N values than those from winter or from the inner coast due to consumption of high trophic level demersal fish. We also found evidence of an ontogenetic shift in isotopic niche width as measured by δ¹³C and δ¹⁵N standard ellipse areas, with juveniles showing a restricted isotopic niche width (1.0‰²) in comparison to subadult (2.2‰²) and adult males (1.9‰²). The proportion of salmonids in the diet of the SASL was negligible and lower than reported in previous studies, which may be related to a recent drop in the production of salmon aquaculture in the region. Our study suggests that the SASL are able to adapt to shifts in spatiotemporal variations in the abundance of potential prey, including feral and farmed salmonids.     

The trophic niche of sculpins Cottus spp. in forage fish assemblages of boreal lakes

We compared the trophic niches of freshwater sculpins Cottus spp. with those of other co-habiting forage fishes in two groups of boreal lakes with distinct habitats and fish communities. Near North Lakes (45° 00′ to 47° 30′ N) were deeper, stratified and contained lake trout Salvelinus namaycush as the apex piscivore, whereas Far North Lakes (51° 10′ to 52° 20′ N) were shallower, did not stratify and contained pike Esox lucius and walleye Sander vitreus as the apex piscivores. Trophic niches of sculpins and other forage fishes were compared based on niche metrics calculated from muscle stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope ratios. In Near North Lakes, sculpins were found almost exclusively in deep, offshore waters and their niche positions reflected a greater reliance on pelagic production (lower δ¹³C) and a higher trophic elevation (higher δ¹⁵N) compared with most other forage fishes. Furthermore, sculpins in Near North Lakes tended to have larger trophic niches (occupied greater area in δ¹³C– δ¹⁵N space), particularly in the food chain (δ¹⁵N) dimension, than other cohabiting forage fishes. In contrast, sculpins in Far North Lakes were commonly found in the nearshore and had trophic niche positions and sizes that were similar to those of the other cohabiting forage fishes. This study illustrates the flexibility in the realised trophic niches of sculpins in relation to habitat availability and fish community composition in boreal lakes.     

Comparative feeding ecology of invasive Ponto-Caspian gobies

Invasions of Ponto-Caspian gobiid fishes are suspected to cause regime shifts in freshwater ecosystems. This study compared the trophic niche differentiations of Neogobius melanostomus and Ponticola kessleri in the upper Danube River using stable isotope analyses (δ¹³C and δ¹⁵N), gut content analyses and morphometric analyses of the digestive tract. Both species were identified as predacious omnivores with high dietary overlap and a generalistic feeding strategy. Amphipods (especially invasive Dikerogammarus spp.) contributed 2/3 to the index of food importance. δ¹⁵N-signatures of N. melanostomus revealed an ontogenetic diet shift and significantly exceeded those in P. kessleri by ~1.5‰, indicating a niche separation of half a trophic level. P. kessleri had shorter uncoiled intestinal tracts than N. melanostomus, indicating a narrower niche and adaptation to animal food. Trophic niches in both species expanded during the growth period with increasing intraguild predation and cannibalism in P. kessleri and increasing molluscivory in N. melanostomus. P. kessleri showed a higher degree of specialization and more stable feeding patterns across seasons, whereas N. melanostomus adapted its diet according to the natural prey availability. The feeding patterns of both species observed in the upper Danube River strongly differ from those in their native ranges, underlining their great plasticity. Both goby species consumed mainly other non-native species (~92% of gut contents) and seemed to benefit from previous invasions of prey species like Dikerogammarus villosus. The invasive success of gobies and their prey mirror fundamental ecological changes in large European freshwater ecosystems.     

Variation in hair δ13C and δ15N values in long-tailed macaques (Macaca fascicularis) from Singapore

Much of the primatology literature on stable isotope ratios of carbon (δ¹³C) and nitrogen (δ¹⁵N) has focused on African and New World species, with comparatively little research published on Asian primates. Here we present hair δ¹³C and δ¹⁵N isotope values for a sample of 33 long-tailed macaques from Singapore. We evaluate the suggestion by a previous researcher that forest degradation and biodiversity loss in Singapore have led to a decline in macaque trophic level. The results of our analysis indicated significant spatial variability in δ¹³C but not δ¹⁵N. The range of variation in δ¹³C was consistent with a diet based on C₃ resources, with one group exhibiting low values consistent with a closed canopy environment. Relative to other macaque species from Europe and Asia, the macaques from Singapore exhibited a low mean δ¹³C value but mid-range mean δ¹⁵N value. Previous research suggesting a decline in macaque trophic level is not supported by the results of our study.     

Fifty years later: trophic ecology and niche overlap of a native and non-indigenous fish species in the western basin of Lake Erie

Since the introduction of white perch (Morone americana) into Lake Erie over 50 years ago, the population size of native yellow perch (Perca flavescens) has decreased up to 79 % and significant changes to the ecosystem have occurred. We examined long-term population estimates and used stable isotopes of carbon (δ ¹³C) and nitrogen (δ ¹⁵N) paired with stomach content analysis to quantify the trophic ecology and niche overlap of adult yellow perch and white perch in the western basin of Lake Erie. We found that changes in yellow perch abundance since 1979 appeared to be better correlated with changes in fishery exploitation rates than with food competition effects from white perch. At the time of this study, yellow perch were found to have higher δ ¹³C values, indicating greater utilization of benthic food resources than white perch, and white perch occupied higher trophic positions based on δ ¹⁵N. The diets of both species varied spatially and seasonally based on stable isotopes and stomach contents, likely driven by changes in prey abundance. Comparison of niche widths using stable isotope population metrics and Schoener diet similarity index suggested a low to moderate degree of niche overlap between species. Isotopic niches of white perch were generally larger than those of yellow perch demonstrating broader resource utilization by this non-indigenous species. We submit that isotopic niche overlap comparisons are more appropriate for studies seeking to understand interactions among populations over course temporal scales, while diet overlap indices, such as the Schoener index provide a means to study fine-scale interactions such as ontogenetic and seasonal diet shifts.     

Prey composition and ontogenetic shift in coastal populations of longnose gar Lepisosteus osseus

Longnose gar Lepisosteus osseus were collected from May 2012 to July 2013 in the Charleston Harbor and Winyah Bay estuaries (SC, U.S.A.). This study examined trends in stomach fullness, described major prey components and their importance in the diet of L. osseus, compared stomach content‐based trophic level estimates with the stable‐isotope‐based proxy: δ¹⁵N and tested for the occurrence of an ontogenetic diet shift using stomach content analysis and stable C and N isotopes (δ¹³C and δ¹⁵N). Dominant prey families were Clupeidae, Sciaenidae, Penaeidae, Fundulidae and Mugilidae, with the highest consumption rates in autumn. Trophic levels calculated using stomach contents did not correspond to δ¹⁵N (P > 0·05). Stomach contents and stable‐isotope signatures indicate ontogenetic prey composition shifts from low trophic level benthic prey (fundulids) to higher trophic level pelagic prey (clupeids) as the fish grow between 400 and 600 mm in standard length. Due to their biomass, abundance and top predator status, L. osseus play a significant ecological role in the estuarine community composition, although this effect has often been overlooked by past researchers and should be considered in future estuarine community studies.     

Spatial,ontogenetic and interspecific variability in stable isotope ratios of nitrogen and carbon of Merluccius capensis and Merluccius paradoxus off South Africa

General linear models (GLMs) were used to determine the relative importance of interspecific, ontogenetic and spatial effects in explaining variability in stable isotope ratios of nitrogen (δ¹⁵N) and carbon (δ¹³C) of the co‐occurring Cape hakes Merluccius capensis and Merluccius paradoxus off South Africa. Significant GLMs were derived for both isotopes, explaining 74 and 56% of observed variance in Merluccius spp. δ¹⁵N and δ¹³C, respectively. Spatial effects (west or south coast) contributed most towards explaining variability in the δ¹⁵N model, with Merluccius spp. off the west coast having higher (by c. 1·4‰) δ¹⁵N levels than Merluccius spp. off the south coast. Fish size and species were also significant in explaining variability in δ¹⁵N, with both species showing significant linear increases in δ¹⁵N with size and M. capensis having higher (by c. 0·7‰) δ¹⁵N values than M. paradoxus. Species and coast explained most and similar amounts of variability in the δ¹³C model, with M. capensis having higher (by c. 0·8‰) δ¹³C values than M. paradoxus, and values being lower (by c. 0·7‰) for fishes off the west coast compared with the south coast. These results not only corroborate the knowledge of Merluccius spp. feeding ecology gained from dietary studies, in particular the ontogenetic change in trophic level corresponding to a changing diet, but also that M. capensis feeds at a slightly higher trophic level than M. paradoxus. The spatial difference in Merluccius spp. δ¹⁵N appears due to a difference in isotopic baseline, and not as a result of Merluccius spp. feeding higher in the food web off the west than the south coast, and provides new evidence that corroborates previous observations of biogeographic differences in isotopic baselines around the South African coast. This study also provides quantitative data on the relative trophic level and trophic width of Cape hakes over a large size range that can be used in ecosystem models of the southern Benguela.     

Global test of Eltonian niche conservatism of nonnative freshwater fish species between their native and introduced ranges

Despite growing evidence that biotic interactions limit the distribution of species and their potential redistribution under climate change, the recent surge of interest in niche conservatism has predominantly focused on the Grinellian (abiotic) niche, whereas few studies have attempted to quantify potential lability in the Eltonian (biotic or trophic) niche. Here, we test for conservatism in the Eltonian niche of 32 freshwater fish species between their introduced and native ranges from 435 populations across the globe. We used stable isotope data to quantify niche shifts along the horizontal (δ¹³C: indicating the origin of the resources consumed) and vertical (δ¹⁵N: describing the trophic position) dimensions of the isotopic niche, as well as shifts in overall isotopic niche breadth. Using an assemblage centroid standardized isotope vector analysis and controlling for phylogenetic relatedness among species, we demonstrated that introduced freshwater fishes exhibited flexibility in both resource use and trophic position that was beyond levels of natural variability observed in their native ranges. By contrast, niche breadth showed variability only within the limits recorded in native populations and varied independently from shifts in mean isotopic niche positions. Across all species and introduction histories, we found a consistent shift towards more balanced acquisition of resources with mixed origins and at intermediate trophic positions, suggesting a general mechanism by which fish species successfully establish into recipient communities. The mechanisms that promote or inhibit species from shifting their Eltonian niche remains unknown, but trophic flexibility is likely to contribute to both the success and the ecological impacts of invasive species and range shifts of native species under future global change.     

Utility of fish scales from stock assessment surveys in stable isotope analysis for initial assessments of trophic relationships in riverine fish communities

The utility of using fish scales collected during stock assessment exercises to assess the trophic relationships of riverine fishes using their stable isotopes of d¹³C and d¹⁵N was tested using three riverine fish communities in England (Rivers Great Ouse, Ivel and Goyt). In each river, European barbel Barbus barbus was an important species, with other cyprinid species, including chub Squalius cephalus, present. Stable isotope analyses was completed using relatively small sample sizes per species (<11) from fish samples collected in 2001, 2005 and 2006 when up to 5 scales were collected from each fish. The calculation of standard ellipse areas (as a measure of trophic niche size) revealed that relative to other fishes, B. barbus occupied high trophic positions with minimal overlap in their trophic niche with other species, especially S. cephalus. As the analysed fish samples comprised species of various length ranges and as length has strong ontogenetic consequences for fish diet composition, generalized linear models were developed in which length was the covariate; model outputs included length‐adjusted mean δ¹³C and δ¹⁵N for each species. In each fish community, significant differences in δ¹³C and δ¹⁵N were apparent between B. barbus and S. cephalus, but were less apparent between B. barbus and other fishes. Thus, whilst the utility of using fish scales from stock assessments in stable isotope analyses are limited due to the differing length ranges of the sampled fishes, they can be useful in identifying trophic differences between species when methods such as stomach content analyses are unavailable.     

Non‐native species modify the isotopic structure of freshwater fish communities across the globe

Multiple anthropogenic pressures including the widespread introductions of non‐native species threaten biodiversity and ecosystem functioning notably by modifying the trophic structure of communities. Here, we provided a global evaluation of the impacts of non‐native species on the isotopic structure (δ¹³C and δ¹⁵N) of freshwater fish communities. We gathered the stable isotope values (n = 4030) of fish species in 496 fish communities in lentic (lakes, backwaters, reservoirs) and lotic (running waters such as streams, rivers) ecosystems throughout the world and quantified the isotopic structure of communities. Overall, we found that communities containing non‐native species had a different isotopic structure than communities without non‐native species. However, these differences varied between ecosystem types and the trophic positions of non‐native species. In lotic ecosystems, communities containing non‐native species had a larger total isotopic niche than communities without non‐native species. This was primarily driven by the addition of non‐native predators at the top of the food chain that increased δ¹⁵N range without modifying the isotopic niche size of native species. In lentic ecosystems, non‐native primary consumers increased δ¹⁵N range and this was likely driven by an increase of resource availability for species at higher trophic levels, increasing food chain length. The introduction of non‐native secondary consumers at the centre of the isotopic niche of recipient communities decreased the core isotopic niche size, the δ¹³C range of recipient communities and the total isotopic niche of coexisting native species. These results suggested a modified contribution of the basal resources consumed (e.g. multi‐chain omnivory) and an increase level of competition with native species. Our results notably imply that, by affecting the isotopic structure of freshwater fish communities at a global scale, non‐native species represent an important source of perturbations that should be accounted for when investigating macro‐ecological patterns of community structure and biotic interactions.     

Consistency of elemental and isotope‐ratio patterns across multiple scales from individual fish

Assays of elemental and stable‐isotope ratios across growth increments of scales have the potential to provide a non‐lethal alternative to otolith chemistry for identifying migration and ontogenetic trophic shifts. A central assumption when employing scales as otolith analogues is that any scale from an individual will provide equivalent information about the chemical history of that fish. This assumption was investigated with multiple scales from wild and captive euryhaline Atlantic tarpon Megalops atlanticus from the north‐west Gulf of Mexico. Elemental (Sr:Ca) and isotope‐ratio (δ¹³C and δ¹⁵N) life‐history profiles were compared among multiple scales from each fish. All three chemical proxies showed highly consistent patterns among non‐regenerated scales, while patterns in regenerated scales diverged, indicating rapid regrowth of interior scale material at the onset of regeneration. Patterns of Sr:Ca and δ¹³C covaried, supporting their use as salinity proxies, while δ¹⁵N patterns were consistent with ontogenetic diet shifts. Water samples taken from aquaria holding captive fish were used to calculate partition coefficients for a suite of elements in M. atlanticus scales for future quantification of migratory movements in the region. Together, these results support the assumption that non‐regenerated scales from individual M. atlanticus provide equivalent chemical histories, further validating their use as a viable non‐lethal alternative to otoliths.     

Spatio‐temporal isotopic signatures (δ13C and δ15N) reveal that two sympatric West African mullet species do not feed on the same basal production sources

Potential trophic competition between two sympatric mullet species, Mugil cephalus and Mugil curema, was explored in the hypersaline estuary of the Saloum Delta (Senegal) using δ¹³C and δ¹⁵N composition of muscle tissues. Between species, δ¹⁵N compositions were similar, suggesting a similar trophic level, while the difference in δ¹³C compositions indicated that these species did not feed from exactly the same basal production sources or at least not in the same proportions. This result provides the first evidence of isotopic niche segregation between two limno‐benthophageous species belonging to the geographically widespread, and often locally abundant, Mugilidae family.