Vertical vegetation zones along 30° N latitude in humid East Asia

Structural changes in altitudinal vegetation zones along a 30° N parallel were studied based on vegetation data from 20 mountains in East Asia, from 85° E to 130° E longitude. The altitude of comparable vegetation zones showed a sharp increase of 1400–1900 m from east to west. Forest limit reached an altitude of 4400–4600 m in the eastern Tibetan Plateau, being the highest forest limit in the world. The limidng factor for the upper limit of a vegetation zone was different in the east and west. Low temperature in winter controlled the upward distribution of the evergreen broadleaf forest in the east, whereas the limiting factor was growing season warmth in the west. A close correlation was found between the climatic indices and annual range of monthly mean temperature (ART) at the upper limit of a vegetation zone.Component genera of each vegetation zone along the 30° N parallel were analyzed, and it was found that the alternation of component genera from east to west was much more apparent in cool-temperate forests, reflecting their response to macrotopography and air masses. The distribution of Fagus extended into winter-cold regions, whilst Tsuga occurred principally in oceanic and warm climates. The northern limit of Tsuga corresponded well to an ART isotherm of 23 °C and its southern limit coincided with that of Fagus. According to the distribution of Fagus and Tsuga, the cool-temperate forests in East Asia along the 30° N belt were divided into three types: deciduous broadleaf forest (represented by Fagus), mixed forest (dominated by Fagus, Tsuga and others), and mixed evergreen forest (consisting mainly of Tsuga and sclerophyll oaks).     

Phytoplankton distribution in the upwelling areas of the Moroccan Atlantic coast localized between 32°30'N and 24°N

Marine phytoplankton was studied in January and July 2002 along of four transects: 32°30′N, 29°N, 24°30′N and 24°N. A total of 142 taxa were recorded in this area. The maximal specific richness, both in summer and in winter, was registered around Dakhla (24°N). The global spatiotemporal variability of species richness and specific diversity showed that the most structured and species-rich populations are situated in the coastal areas. The vertical variation of the two parameters showed homogeneity between depth levels. The maximal phytoplanktonic densities are recorded in the southern transects due to the permanent upwelling activity in the southern Atlantic coast. The bathymetric distribution of densities was more heterogeneous during summer, characterized by a high intensity of upwelling. The species Thalassionema nitzschioides, Asterionellopsis glacialis, Melosira, Chaetoceros and Leptocylindrus minimus are indicators of upwelling.     

Characterization of Family D DNA polymerase from Thermococcus sp. 9°N

Accurate DNA replication is essential for maintenance of every genome. All archaeal genomes except Crenarchaea, encode for a member of Family B (polB) and Family D (polD) DNA polymerases. Gene deletion studies in Thermococcus kodakaraensis and Methanococcus maripaludis show that polD is the only essential DNA polymerase in these organisms. Thus, polD may be the primary replicative DNA polymerase for both leading and lagging strand synthesis. To understand this unique archaeal enzyme, we report the biochemical characterization of a heterodimeric polD from Thermococcus. PolD contains both DNA polymerase and proofreading 3′–5′ exonuclease activities to ensure efficient and accurate genome duplication. The polD incorporation fidelity was determined for the first time. Despite containing 3′–5′ exonuclease proofreading activity, polD has a relatively high error rate (95 × 10^?5) compared to polB (19 × 10^?5) and at least 10-fold higher than the polB DNA polymerases from yeast (polε and polδ) or Escherichia coli DNA polIII holoenzyme. The implications of polD fidelity and biochemical properties in leading and lagging strand synthesis are discussed.     

Pelagic primary production during summer along 65 to 72°N off West Greenland

The distribution of phytoplankton biomass and primary production were studied during summer 1993 at 16 stations from 65 to 72°N off West Greenland, ranging more than 900 km. Hydrography, nutrients and chlorophyll a profiles revealed a significant change in structure from south to north. Nitrate was depleted in the euphotic zone at most stations except close to the ice edge (West Ice) or close to outflow from large glaciers. The vertical distribution of phosphate followed that of nitrate, but was never depleted. Despite two stations with relatively high surface concentrations, silica showed the same distribution as the other two nutrients. In the south, chlorophyll a concentration and primary production were lower than north of Disko Bay (69°N), associated with a well-mixed versus a salinity-generated stratification, respectively. In Vaigat, a high-production station was identified, (st. 910, 69°52′69N–51°30′61W) with a chlorophyll a concentration in the euphotic zone of >13 μg l⁻¹ and an area primary production of 3.2 g C m⁻² day⁻¹. This is seldom encountered in arctic waters and was presumably due to nutrient-rich melt-water originating from the Iluliíssat Glacier. The overall primary production for the studied area was 67–3207 mg C m⁻² day⁻¹ (mean ± SD=341± 743 mg C m⁻² day⁻¹), which is within the range of the few results published for West Greenland and eastern Canadian Arctic waters. Accepted: 24 October 1998     

Distribution of pelagic Ostracoda (Crustacea) inhabiting the waters around Svalbard (Arctic Ocean: 76°36–81°50N)

Although, pelagic Ostracoda are locally abundant component of the mesozooplankton in the waters around Svalbard, the group remains poorly characterised both taxonomically and ecologically. Herein, the spatial and vertical variations in abundances and species composition of the pelagic Ostracoda assemblages are examined and related to the water masses. The study is based on a series of zooplankton samples collected with a multinet plankton sampler (MPS; HydroBios, Kiel), consisting of five nets fitted with a 180-μm mesh net. Samples were collected from deep stations (i.e., with bottom depths >300 m) around Svalbard and included localities influenced by the West Spitsbergen Current and the East Spitsbergen Current and to the north of Svalbard, between years 2001 and 2006. Throughout all the samples studied Discoconchoecia elegans was the numerically dominant species. The other species found were Boroecia maxima, Boroecia borealis, Obtusoecia obtusata, and a rare novel Boroecia species. Analyses of the pelagic Ostracoda assemblages showed that their variability was predominantly influenced by four factors: water temperature, geographical position, bottom depth and season. The highest densities of D. elegans were correlated with salinities >35 PSU whereas B. maxima distribution was dependent on latitude. Highest concentrations of B. borealis were determined by longitude. Abundances of O. obtusata were positively correlated with warmer water temperatures. Thus this work suggests that halocyprids have the potential to be good indicators of environmental changes associated with shifts in climate at high latitudes in the North Atlantic.     

Arctic cyanobacteria and limnological properties of their environment: Bylot Island, Northwest Territories, Canada (73°N, 80°W)

Cyanobacteria were a major constituent of phototrophic communities in the lakes, ponds and streams of Bylot Island, in the Canadian high Arctic. The waters spanned a range of temperatures (1.8–16.8°C in late July), pH regimes (6.2–9.2) and conductivities (1.5–1700 μS cm⁻¹) but nutrient concentrations were consistently low (< 1 μg dissolved reactive P l⁻¹ at all sites; < 10 μg NO₃-N l⁻¹ at most sites). Picoplanktonic species (Synechococcus spp.) were often the numerical dominants in the plankton, and periphytic filamentous species (Oscillatoriaceae) commonly formed thick (5–50 mm) benthic mats. Bloom-forming species of cyanobacteria were either absent or poorly represented even in Chla-rich ponds. The total community biomass ranged from 0.1 to 29.8 μg Chla l⁻¹ in the plankton and from 1.1 to 34.8 μg Chla cm⁻² in the benthos. The in vivo absorbance characteristics of isolates from these environments indicated a genetically diverse range of species in each group of Arctic cyanobacteria. Growth versus irradiance relationships were determined for each of the isolates and similarly revealed large genetic differences (maximum growth rates from 0.17 to 0.61 day⁻¹), even between morphologically identical taxa. A comparison of nutrients, pigment concentrations and species composition underscores the strong similarities between freshwater ecosystems in the north and south polar zones. Received: 3 June 1996 / Accepted: 3 November 1996     

Whole-plant CO2 exchange of seedlings of two Pinus sylvestris L. provenances grown under simulated photoperiodic conditions of 50° and 60° N

Summary Seedlings of Scots pine (Pinus sylvestris L.) from Russia (59°58N) and Poland (53°34N) were grown for 4 months in controlled environment chambers, simulating the photoperiod conditions of 50° and 60° N. The Russian population grown at 50° N showed earlier height growth cessation than the Polish population. Photoperiodic conditions of 60° N increased proportional allocation of dry mass to shoots and lowered allocation to roots in the Russian population, which also had greater allocation to roots than the Polish population in both treatments. Total non-structural carbohydrate concentrations in roots and secondary needles of both populations were significantly higher at the end of the 4 month growing season at 50° compared to 60° N. Net photosynthesis rates were similar for both provenances and both treatments. The rate of transpiration was higher and water-use efficiency lower for plants grown in long-day conditions of 60° N. The mean respiration rate of roots ranged between 30 and 36 nmol CO₂ · g^-1 dry mass · s^-1 and was 2–4 times higher than values observed for needles. Root respiration rates were greater in the Polish than the Russian population. Despite this, the greater allocation to root dry mass of the Russian population resulted in greater root respiratory cost as a proportion of daily carbon gain. Overall, root respiration accounted for between 18 to 34% of the total daily net carbon assimilation of these populations. Root and total respiration as a proportion of net daily carbon assimilation were greater at 50° than 60°N. Mean net integrated CO₂ gains were 2.2–2.5 mmol CO₂ · day^-1 for seedlings from Russia compared to 3 mmol CO₂ · day^-1 for Poland.     

The vegetation history of a coastal stone-age and iron-age settlement at 70°N,Norway

The Holocene vegetation history of the islet of Melkøya at Hammerfest, Norway (70°42N, 23°36E) is documented by several pollen profiles sampled close to excavated stone-age and iron-age settlements. Local paludification began c. 9700 cal B.P. and oligotrophication from c. 7300 cal B.P. onwards. A Betula pubescens—B.nana heath/woodland persisted until c. 8500 cal B.P., when a mixed Betula pubescens—Pinus sylvestris forest developed. Development towards an open heath is recorded from c. 4700 cal B.P. and culminates around 2700 cal B.P. A weak, possibly anthropogenic, impact is recognisable from c. 9200 cal. BP, but a marked local impact by man begins with the climate improvement and local forest development around 8500 cal B.P. The anthropogenic impact on the vegetation was the cutting of local woodland with an increase in grasses and herbs, the latter partly originating from the nitrophilous seashore vegetation. Forest clearance is recognisable at c. 6200 cal B.P., following a short period of re-growth after a burning event. Several anthropogenically related charred layers were formed in the peat before a longer period of abandonment from c. 3100 cal B.P. to c. 2000 cal B.P.     

Sensitivity improvement for correlations involving arginine side-chain Nε/Hε resonances in multi-dimensional NMR experiments using broadband 15N 180° pulses

Due to practical limitations in available ¹⁵N rf field strength, imperfections in ¹⁵N 180° pulses arising from off-resonance effects can result in significant sensitivity loss, even if the chemical shift offset is relatively small. Indeed, in multi-dimensional NMR experiments optimized for protein backbone amide groups, cross-peaks arising from the Arg guanidino ¹⁵Nε (~85 ppm) are highly attenuated by the presence of multiple INEPT transfer steps. To improve the sensitivity for correlations involving Arg Nε–Hε groups, we have incorporated ¹⁵N broadband 180° pulses into 3D ¹⁵N-separated NOE-HSQC and HNCACB experiments. Two ¹⁵N-WURST pulses incorporated at the INEPT transfer steps of the 3D ¹⁵N-separated NOE-HSQC pulse sequence resulted in a ~1.5-fold increase in sensitivity for the Arg Nε–Hε signals at 800 MHz. For the 3D HNCACB experiment, five ¹⁵N Abramovich-Vega pulses were incorporated for broadband inversion and refocusing, and the sensitivity of Arg¹Hε-¹⁵Nε-¹³Cγ/¹³Cδ correlation peaks was enhanced by a factor of ~1.7 at 500 MHz. These experiments eliminate the necessity for additional experiments to assign Arg ¹Hε and ¹⁵Nε resonances. In addition, the increased sensitivity afforded for the detection of NOE cross-peaks involving correlations with the ¹⁵Nε/¹Hε of Arg in 3D ¹⁵N-separated NOE experiments should prove to be very useful for structural analysis of interactions involving Arg side-chains.     

Human exposure to ultraviolet radiation at the Antipodes – a comparison between an Antarctic (67°S) and Arctic (75°N) location

. We used ultraviolet radiation dosimeters to investigate human exposure at two polar latitudes with a 24-h photoperiod: at Rothera Station (UK) (67°S) and at a field camp in the Haughton impact structure in the Canadian High Arctic (75°N). Mean personal UV radiation exposure in the Antarctic location was 4.3 times greater than that in the Arctic location, even in the absence of ozone depletion. More than zenith angle accounted for the higher UV exposure. Widespread snow and ice covers, and probably less atmospheric pollution, caused higher personal exposures. Although the mean exposures were higher in the Antarctic location, the mean exposure ratio in the Antarctic (0.20ǂ.09) was similar to the value measured in the Arctic (0.27ǂ.09) on clear days. We use the Antarctic ratio to provide quantitative estimates of UV-radiation exposure for workers at the Geographical South Pole for the winter solstice under a constant 24-h photoperiod. Exposure ratios can be used to translate measurements of UV radiation by horizontally fixed spectroradiometers into estimates of the mean exposures expected in populations at polar latitudes, although variations between individuals are large. The data have implications for determining the UV exposures of indigenous high-latitude populations.     

Adaptation strategies of copepods (superfamily Centropagoidea) in the White Sea (66°N)

Seasonal dynamics of major biochemical features were studied for three abundant egg-diapausing copepods Acartia bifilosa, Centropages hamatus and Temora longicornis, in the White Sea (66°N), between June 2002 and September 2002. Dry weight (DW) and prosome length varied from 0.54 μg ind⁻¹ and 0.163 ± 0.012 mm (A. bifilosa, CI) to 9.58 ± 0.72 μg ind⁻¹ and 1.135 ± 0.167 mm (C. hamatus, females). C_org and N_org content reached up to 5.91 ± 0.44 and 1.23 ± 0.09 μg ind⁻¹ (C. hamatus, females). Protein and lipid content varied greatly from 31.8 to 67.3% DW and from 8.7 to 42.6% DW, respectively. These species show somewhat different biology compared to species at lower latitudes. The copepods use lipid stores to survive during short-term food shortage (e.g. in autumn) and successfully complete their life cycle. In the isolated White Sea during last post-glacial period, species probably evolved some special biochemical features (especially wax esters presence). Food quality demands and long ice coverage are possible factors limiting early development of species in spring.     

Macrofaunal abundance at 79°N off East Greenland: opposing data from epibenthic-sledge and box-corer samples

During the expedition ARK XI-2 with RV Polarstern in September/October 1995, a transect of samples was taken off East Greenland from the shelf down to about 1800 m depth by means of an epibenthic sledge and a giant box corer, in order to obtain information on epibenthic and endobenthic macrofauna. Within the epibenthic sledge catches, the Cumacea were the most numerous taxon with 32,123 (always calculated for 1000 m) specimens, followed by the Isopoda with 26,914 specimens, and Amphipoda with 20,900; Mysidacea and Tanaidacea were less important. Amphipoda were the most numerous taxon on the shelf, while with increasing depth Isopoda and especially Cumacea became increasingly important. Macrofauna analysed from the box-corer samples decreased in abundance with depth. The highest macrofaunal abundance was found on the shelf, with 8128 ind. m⁻² (200 m); below this depth, density decreased from ≈2000 ind. m⁻² (at 800 m) to ≈800 ind. m⁻² (2000 m). Peracarid crustaceans and polychaetes were, next to bivalves, the most frequent. Polychaetes clearly dominated the shelf communities; their relative percentage decreased with increasing water depth while the relative percentage of Peracarida increased simultaneously. Interestingly, the highest number of peracarids in the epibenthic-sledge samples was reported from deep sea, while box-corer samples showed decreasing macrofaunal abundance with depth. The relative percentage of peracarids in the box-corer samples increased with depth, while in absolute numbers, peracarids from these samples were also highest on the shelf at about 200 m depth. Accepted: 14 February 1999     

The Roles of Family B and D DNA Polymerases in Thermococcus Species 9°N Okazaki Fragment Maturation

During replication, Okazaki fragment maturation is a fundamental process that joins discontinuously synthesized DNA fragments into a contiguous lagging strand. Efficient maturation prevents repeat sequence expansions, small duplications, and generation of double-stranded DNA breaks. To address the components required for the process in Thermococcus, Okazaki fragment maturation was reconstituted in vitro using purified proteins from Thermococcus species 9°N or cell extracts. A dual color fluorescence assay was developed to monitor reaction substrates, intermediates, and products. DNA polymerase D (polD) was proposed to function as the replicative polymerase in Thermococcus replicating both the leading and the lagging strands. It is shown here, however, that it stops before the previous Okazaki fragments, failing to rapidly process them. Instead, Family B DNA polymerase (polB) was observed to rapidly fill the gaps left by polD and displaces the downstream Okazaki fragment to create a flap structure. This flap structure was cleaved by flap endonuclease 1 (Fen1) and the resultant nick was ligated by DNA ligase to form a mature lagging strand. The similarities to both bacterial and eukaryotic systems and evolutionary implications of archaeal Okazaki fragment maturation are discussed.     

Metabolic differences inBacillus stearothermophilus grown at 55°C and 37°C

Summary Bacillus stearothermophilus was adapted to grow at 55°C and 37°C in a complex medium with almost equivalent yields in cell mass. In both temperature ranges the maximum specific growth rates (μ_max) were identical. Cellular extracts of this bacterium showed remarkable differences in the activity levels of several enzymes, depending on the respective growth temperature. High activities of glyceraldehyde-3-phosphate dehydrogenase and alcohol dehydrogenase were observed in bacteria from thermophilic cultures (55°C) and the respiratory quotient exceeded 1.0. Under anaerobic conditions at 55°C μ_max was the same as in aerobic cultures. No alcohol dehydrogenase was detected in cells from mesophilic cultures (37°C), however, and the level of glyceraldehyde-3-phosphate dehydrogenase was also extremely low under mesophilic conditions. Succinate dehydrogenase and isocitrate dehydrogenase activity appeared to be higher in bacteria grown at 37°C; the resspiratory quotient was always lower than 1.0. At 37°C, acetoin formation was observed regularly, a fermentation product which was never detected in 55°C-cultures. Under anaerobic conditions at 37°C a very low growth rate was found. When adapted to grow at 37°C or 55°C,B. stearothermophilus is apparently able to use different catabolic systems.     

Diversity of Meiofauna from the 9°50′N East Pacific Rise across a Gradient of Hydrothermal Fluid Emissions

Background

We studied the meiofauna community at deep-sea hydrothermal vents along a gradient of vent fluid emissions in the axial summit trought (AST) of the East Pacific Rise 9°50′N region. The gradient ranged from extreme high temperatures, high sulfide concentrations, and low pH at sulfide chimneys to ambient deep-sea water conditions on bare basalt. We explore meiofauna diversity and abundance, and discuss its possible underlying ecological and evolutionary processes.

Methodology/Principal Findings

After sampling in five physico-chemically different habitats, the meiofauna was sorted, counted and classified. Abundances were low at all sites. A total of 52 species were identified at vent habitats. The vent community was dominated by hard substrate generalists that also lived on bare basalt at ambient deep-sea temperature in the axial summit trough (AST generalists). Some vent species were restricted to a specific vent habitat (vent specialists), but others occurred over a wide range of physico-chemical conditions (vent generalists). Additionally, 35 species were only found on cold bare basalt (basalt specialists). At vent sites, species richness and diversity clearly increased with decreasing influence of vent fluid emissions from extreme flow sulfide chimney (no fauna), high flow pompei worm (S: 4–7, H''_loge: 0.11–0.45), vigorous flow tubeworm (S: 8–23; H''_loge: 0.44–2.00) to low flow mussel habitats (S: 28–31; H''_loge: 2.34–2.60).

Conclusions/Significance

Our data suggest that with increasing temperature and toxic hydrogen sulfide concentrations and increasing amplitude of variation of these factors, fewer species are able to cope with these extreme conditions. This results in less diverse communities in more extreme habitats. The finding of many species being present at sites with and without vent fluid emissions points to a non endemic deep-sea hydrothermal vent meiofaunal community. This is in contrast to a mostly endemic macrofauna but similar to what is known for meiofauna from shallow-water vents.     

Nature of light requirement for the flowering of Chenopodium rubrum L. (Ecotype 60° 47′N)

It has been shown that induction of flowering in Chenopodium rubrum L. (ecotype 60° 47 N) seedlings in BCJ light conditions is intensity dependent (Cumming, 1969, Canad. J. Bot. 47, 1247–1250) and that, this intensity dependence is not based on photosynthesis (Sawhney and Cumming, 1971, Can. J. Bot. 49, 2133–2137). Since BCJ light emits a high proportion of energy in the far-red, and the High Energy Reaction (HER) has its action maxima in the far-red and blue regions of the spectrum, we tested the involvement of HER in the light induction of flowering in C. rubrum. Our results show that optimum intensities of blue light are effective in inducing flowering in C. rubrum. Red light exposure does not lead to flower induction. We suggest the HER may be involved in the flower induction of C. rubrum in light. However, when high energy in blue and/or farred is provided in presence of energy between 500–700 nm wavebands, there is no flowering in C. rubrum. We suggest that flower inducing activity of HER may be counteracted by flower inhibitory action of red wavebands.This paper constitutes a part of a Ph. D. thesis submitted to the University of Western Ontario, London, Ontario     

Nature of light requirement for the flowering of Chenopodium rubrum L. (Ecotype 60° 47′ N)

Seedlings of C. rubrum were irradiated with different light qualities and intensities following a single inductive dark period. Our results show that relatively low intensity white light (35–100 ft. c.) does not support flower development while high intensity white light (650–800 ft. c.) permits 100% flowering. We have shown that the low intensity light inhibiton of flower development is not due to suboptimal photosynthesis. Relatively low intensities of light rich in far-red or blue wavebands sustains optimum flower development, whereas red light is totally ineffective in this respect. Considering that the intensity dependent High Energy Reaction (HER) has its action maxima in the blue and far-red we propose that HER may be positively involved in the flower development of C. rubrum. Our study further suggests that there may be some flower inhibitory component at play in relatively low intensity white light conditions and HER may be required to counteract this flower inhibitory effect.Abbreviations SD short day plant - HER High Energy Reaction - P_FR far-red absorbing form of phytochrome - P_R red absorbing form of phytochrome - L.I.I. low intensity incandescent white light - H.I.I. high intensity incandescent white light - L.I.F. low intensity fluorescent white light - H.I.F. high intensity fluorescent white light - GA₃ gibbrellic acid This paper constitutes a part of a Ph.D. thesis submitted to the University of Western Ontario, London, Ontario.     

Benthic foraminiferal distributions in Chilean fjords: 47°S to 54°S

Surface sediment samples collected from the fjord region of southern Chile (47° to 54° South) were analyzed for benthic foraminifera. A total of 175 species were identified including agglutinated and calcareous benthic taxa. Hierarchical cluster analysis of the foraminiferal data resulted in the recognition of three distinct biofacies: inner-fjord, intermediate fjord and channel, and oceanic biofacies, geographically controlled by relative position between the Pacific Ocean and fjord heads. Similarity percentage (SIMPER) analysis identified key taxa in the definition of the biofacies that include Globocassidulina rossensis, Cassidulina laevigata and Bulimina notovata. Principal components analysis resulted in two principal components representing sediment size, and bottom water temperature and salinity.Regional distributions are strongly controlled by the oceanographic conditions influenced from the Pacific in the west and the glacial/freshwater input from the east. Localized distributions of foraminifera are controlled by conditions influenced by the physiography of the individual fjords and channels. The distribution of Chilean fjord foraminifera and their environmental associations are consistent with results from other temperate to high latitude fjord foraminiferal studies.     

α°- and β°- Thalassemia in a Thai family: unusually mild homozygous β°-thalassemia without α-globin gene deletion

Summary Alpha-globin genes were analyzed by the direct method of DNA mapping using - and -globin specific probes in a Thai family in which the proposita was an unusually mild °-thalessemia homozygote. °-Thalessemia was found to be segregating in the family, inherited from the proposita's father by one of her younger sisters. However, °-thatlessemia was not detected by this DNA mapping in the proposita. The mild homozygous °-thalessemia in this family may result from interactions of a non-deletion -thalassemia, a gene responsible for high proteolytic activity permitting more balanced globin-chain levels, or from an unusually active hemoglobin F production in the proposita.