Responses of soil microbiota of a late successional alpine grassland to long term CO2 enrichment

We investigated microbial responses in a late successional sedge-dominated alpine grassland to four seasons of CO₂ enrichment. Part of the plots received fertilizer equivalent to 4.5g N m⁻² a⁻¹. Soil basal respiration (R _mic ), the metabolic quotient for CO₂ (qCO₂=R _mic /C _mic ), microbial C and N (C _mic and N _mic ) as well as total soil organic C and N showed no response to CO₂ enrichment alone. However, when the CO₂ treatment was combined with fertilizer addition R _mic and qCO₂ were statistically significantly higher under elevated CO₂ than under ambient conditions (+57% and +71%, respectively). Fertilizer addition increased microbial N pools by 17%, but this was not influenced by elevated CO₂. Microbial C was neither affected by elevated CO₂ nor fertilizer. The lack of a CO₂-effect in unfertilized plots was suprising in the light of our evidence (based on C balance) that enhanced soil C inputs must have occurred under elevated CO₂ regardless of fertilizer treatment. Based on these data and other published work we suggest that microbial responses to elevated CO₂ in such stable, late-successional ecosystems are limited by the availability of mineral nutrients and that results obtained with fertile or heavily disturbed substrates are unsuitable to predict future microbial responses to elevated CO₂ in natural systems. However, when nutrient limitation is removed (e.g. by wet nitrogen deposition) microbes make use of the additional carbon introduced into the soil system. We believe that the response of natural ecosystems to elevated CO₂ must be studied in situ in natural, undisturbed systems.     

Interactions of tropospheric CO2 and O3 enrichments and moisture variations on microbial biomass and respiration in soil

Soil microbial biomass C (C_mic) is a sensitive indicator of trends in organic matter dynamics in terrestrial ecosystems. This study was conducted to determine the effects of tropospheric CO₂ or O₃ enrichments and moisture variations on total soil organic C (C_org), mineralizable C fraction (C_Min), C_mic, maintenance respiratory (qCO₂) or C_mic death (qD) quotients, and their relationship with basal respiration (BR) rates and field respiration (FR) fluxes in wheat‐soybean agroecosystems. Wheat (Triticum aestivum L.) and soybean (Glycine max. L. Merr) plants were grown to maturity in 3‐m dia open‐top field chambers and exposed to charcoal‐filtered (CF) air at 350 μL CO₂ L^?1; CF air + 150 μL CO₂ L^?1; nonfiltered (NF) air + 35 nL O₃ L^?1; and NF air + 35 nL O₃ L^?1 + 150 μL CO₂ L^?1 at optimum (? 0.05 MPa) and restricted soil moisture (? 1.0 ± 0.05 MPa) regimes. The + 150 μL CO₂ L^?1 additions were 18 h d^?1 and the + 35 nL O₃ L^?1 treatments were 7 h d^?1 from April until late October. While C_org did not vary consistently, C_Min, C_mic and C_mic fractions increased in soils under tropospheric CO₂ enrichment (500 μL CO₂ L^?1) and decreased under high O₃ exposures (55 ± 6 nL O₃ L^?1 for wheat; 60 ± 5 nL O₃ L^?1 for soybean) compared to the CF treatments (25 ± 5 nL O₃ L^?1). The qCO₂ or qD quotients of C_mic were also significantly decreased in soils under high CO₂ but increased under high O₃ exposures compared to the CF control. The BR rates did not vary consistently but they were higher in well‐watered soils. The FR fluxes were lower under high O₃ exposures compared to soils under the CF control. An increase in C_mic or C_mic fractions and decrease in qCO₂ or qD observed under high CO₂ treatment suggest that these soils were acting as C sinks whereas, reductions in C_mic or C_mic fractions and increase in qCO₂ or qD in soils under elevated tropospheric O₃ exposures suggest the soils were serving as a source of CO₂.     

Land cover change effects on soil chemical and biological properties after planting Mongolian pine (Pinus sylvestris var. mongolica) in sandy lands in Keerqin, northeastern China

We compared soil moisture content, pH, total organic carbon (C _org), total nitrogen (TN), total phosphorus (TP) and inorganic N (NH₄ ⁺–N, NO₃ ^?–N) concentrations, soil potential C and N mineralization rates, soil microbial biomass C (C _mic), soil metabolic quotient (qCO₂), soil microbial quotient (C _mic/C _org) and soil enzyme (urease and invertase) activities in semiarid sandy soils under three types of land cover: grassland, Mongolian pine (Pinus sylvestris var. mongolica) plantation, and elm (Ulmus punila)–grass savanna in southeastern Keerqin, in northeast China. Soil C _org, TN and TP concentrations (0–10, 10–20, 20–40 and 40–60 cm) were lower while soil C/N and C/P ratios were higher in the plantation than in grassland and savanna. The effects of land cover change on NH₄ ⁺–N and NO₃ ^?–N concentrations, soil potential nitrification and C mineralization rates in the surface soil (0–10 cm) were dependent on sampling season; but soil potential N mineralization rates were not affected by land cover type and sampling season. The effects of land cover change on C _mic and qCO₂ of surface soil were not significant; but C _mic/C _org were significantly affected by land cover change and sampling season. We also found that land cover change, sampling season and land cover type?×?sampling season interaction significantly influenced soil enzyme (urease and invertase) activities. Usually soil enzyme activities were lower in the pine plantations than in grassland and savanna. Our results suggest that land cover change markedly influenced soil chemical and biological properties in sandy soils in the semiarid region, and these effects vary with sampling season.     

Elevated CO2 increases microbial carbon substrate use and nitrogen cycling in Mojave Desert soils

Identifying soil microbial responses to anthropogenically driven environmental changes is critically important as concerns intensify over the potential degradation of ecosystem function. We assessed the effects of elevated atmospheric CO₂ on microbial carbon (C) and nitrogen (N) cycling in Mojave Desert soils using extracellular enzyme activities (EEAs), community‐level physiological profiles (CLPPs), and gross N transformation rates. Soils were collected from unvegetated interspaces between plants and under the dominant shrub (Larrea tridentata) during the 2004–2005 growing season, an above‐average rainfall year. Because most measured variables responded strongly to soil water availability, all significant effects of soil water content were used as covariates to remove potential confounding effects of water availability on microbial responses to experimental treatment effects of cover type, CO₂, and sampling date. Microbial C and N activities were lower in interspace soils compared with soils under Larrea, and responses to date and CO₂ treatments were cover specific. Over the growing season, EEAs involved in cellulose (cellobiohydrolase) and orthophosphate (alkaline phosphatase) degradation decreased under ambient CO₂, but increased under elevated CO₂. Microbial C use and substrate use diversity in CLPPs decreased over time, and elevated CO₂ positively affected both. Elevated CO₂ also altered microbial C use patterns, suggesting changes in the quantity and/or quality of soil C inputs. In contrast, microbial biomass N was higher in interspace soils than soils under Larrea, and was lower in soils exposed to elevated CO₂. Gross rates of NH₄⁺ transformations increased over the growing season, and late‐season NH₄⁺ fluxes were negatively affected by elevated CO₂. Gross NO₃⁻ fluxes decreased over time, with early season interspace soils positively affected by elevated CO₂. General increases in microbial activities under elevated CO₂ are likely attributable to greater microbial biomass in interspace soils, and to increased microbial turnover rates and/or metabolic levels rather than pool size in soils under Larrea. Because soil water content and plant cover type dominates microbial C and N responses to CO₂, the ability of desert landscapes to mitigate or intensify the impacts of global change will ultimately depend on how changes in precipitation and increasing atmospheric CO₂ shift the spatial distribution of Mojave Desert plant communities.     

Altered patterns of soil carbon substrate usage and heterotrophic respiration in a pine forest with elevated CO2 and N fertilization

To assess how heterotrophic microorganisms may alter their activities and thus their CO₂‐C return to the atmosphere with elevated CO₂ and changing N availability, we examined soil organic matter (SOM) dynamics at the Duke Free Air Carbon Enrichment (FACE) site, after N fertilizer was applied. We measured heterotrophic respiration during early and late stages of SOM mineralization in soil incubations to capture activity on relatively labile and refractory SOM pools. We also measured δ¹³C of respired CO₂‐C and phospholipid fatty acids (PLFAs) during early mineralization stages to track the microbial groups involved in substrate use. We calculated , a measure of δ¹³C_PLFA normalized by respired δ¹³CO₂, to assess microbial function with C substrates formed with elevated CO₂ and altered N availability, via the distinct δ¹³C of the supplemental CO₂. We also quantified extracellular enzyme activity (EEA) during labile and recalcitrant SOM mineralization. Early in the incubations, increased N availability reduced heterotrophic CO₂‐C release. By the later stages of SOM mineralization, elevated CO₂ soils with fertilization had respired 72% of the CO₂‐C respired by all other soils. values suggest that fungi in elevated CO₂ plots took up C substrates possessing the δ¹³C signature of recently formed SOM, and added N promoted the activity of Gram‐negative bacteria and reduced that of Gram‐positive bacteria, particularly actinomycetes. Consistent with this, the enzyme responsible for the degradation of peptidoglycan and chitin, compounds produced by Gram‐positive bacteria and fungi, respectively, experienced a decline in activity with N fertilization. If patterns observed in this study with N additions are reversed with progressive N limitation at this site, actinomycetes and other Gram‐positive bacteria responsible for mineralizing relatively recalcitrant substrates may experience increases in their activity. Such shifts in microbial functioning may result in increased turnover of, and C release from, relatively decay‐resistant material.     

The influence of acid irrigation and liming on the soil microbial biomass in a Norway spruce (Picea abies [L.] K.) stand

Over a period of three years (1990–1992) microbial biomass-C (C_mic), CO₂ evolution, the C_mic:C_org ratio and the metabolic quotient for CO₂ (qCO₂) were determined in a Norway spruce stand (Höglwald) with experimentally acid-irrigated and limed plots since 1984. A clear relationship between soil pH and the level of microbial biomass-(C_mic) was noted, C_mic increasing with increasing soil pH in O_h or A_h horizons. More microbial biomass-C per unit C_{org} (C_mic:C_org ratio) was detected in limed plots with elevated pH of O_h or A_h horizons as compared to unlimed plots with almost 3 times more C_mic per unit C_org in the limed O_h horizon. Differences here are significant at least at the p=0.05 level. The positive effects of liming (higher pH) on the C_mic:C_org ratio was more pronounced in the upper horizon (O_h)). The total CO₂ evolution rate of unlimed plots was only half of that noted for limed plots which corresponded to the low microbial biomass levels of unlimed plots. The specific respiratory activity, qCO₂, was similar and not significantly different between the unlimed control plot and the limed plot.Acid irrigation of plots with already low pH did not significantly affect the level of microbial biomass, the C_mic:C_org ratio or qCO₂. An elevated qCO₂ could be seen, however, for the limed + acid irrigated plot. The biomass seemed extremely stressed, showing with 3.8 g CO₂-C mg_-1 C_mic h_-1 (O_h) the highest qCO₂ value of all treatments. This was interpreted as a reflection of the continuous adaptation processes to the H⁺ ions by the microflora. The negative effect of acid irrigation of limed plots was also manifested in a decreased C_mic:C_org ratio.     

帽儿山地区不同土地利用方式下土壤-微生物-矿化碳氮化学计量特征

土地利用方式的变化导致土壤碳氮含量及其化学计量关系的变化,然而土壤微生物化学计量及其驱动的碳氮矿化过程如何响应这种变化仍不明确。以帽儿山地区天然落叶阔叶林、人工红松林、草地和农田4种不同土地利用类型为对象,测定其土壤有机碳(C_(soil))、全氮(N_(soil))、微生物生物量碳和氮(C_(mic)和N_(mic))、土壤碳和氮矿化速率(C_(min)和N_(min)),旨在比较不同土地利用方式对土壤、微生物碳氮化学计量特征及矿化速率的影响,探索土壤-微生物-矿化之间碳氮化学计量特征的相关性,揭示微生物对土壤碳氮化学计量变化的响应和调控机制。结果显示:C_(soil)、N_(soil)、C_(mic)、N_(mic)和C_(min)均呈现天然落叶阔叶林人工红松林草地农田,而天然落叶阔叶林和草地的N_(min)显著高于人工红松林和农田。土地利用方式显著影响土壤和微生物碳氮比(C∶N_(soil)和C∶N_(mic)),均呈现农田最高。不同土地利用方式的数据综合分析发现:碳氮矿化速率比与C∶N_(mic)呈负相关,而和微生物与土壤碳氮化学计量不平衡性(C∶N_(imb))显著正相关。单位微生物生物量的碳矿化速率(qCO_2)随着C∶N_(mic)的增加而降低,而单位微生物生物量的氮矿化速率(qAN)随着C∶N_(mic)的增加而增加。C∶N_(imb)与qCO_2正相关,与qAN负相关。以上结果表明,微生物会通过改变自身碳氮化学计量、调整碳氮之间相对矿化速率,以适应土地利用变化导致的土壤碳氮及其化学计量的变异性,以满足自身生长和代谢的碳氮需求平衡。     

The variation of soil microbial respiration with depth in relation to soil carbon composition

The vertical variation in soil microbial respiratory activity and its relationship to organic carbon pools is critical for modeling soil C stock and predicting impacts of climate change, but is not well understood. Mineral soil samples, taken from four Scottish soils at different depths (0–8, 8–16, 16–24, 24–32 cm), were analyzed and incubated in the laboratory under constant temperature and environmental conditions. The vegetation type/plant species showed significant effects on the absolute concentration of C components and microbial activity, but the relative distribution of C and respiration rate with soil depth are similar across sites. Soil C pools and microbial respiratory activity declined rapidly with soil depth, with about 30% of total organic carbon (TOC) and dissolved organic carbon (DOC), and about half microbial carbon (C_mic) and respired CO₂ observed in the top 8 cm. The ratio of CO₂:TOC generally decreased with soil depth, but CO₂:DOC was significantly higher in the top 8 cm of soil than in the subsoil (8–32 cm). No general pattern between qCO₂ (CO₂:C_mic) and soil depth was found. The vertical distributions of soil C pools and microbial respiratory activity were best fitted with a single exponential equation. Compared with TOC and DOC, C_mic appears to be an adequate predictor for the variation in microbial respiration rate with soil depth, with 95% of variation in normalized respiration rate accounted for by a linear relationship.     

Indirect effects of soil moisture reverse soil C sequestration responses of a spring wheat agroecosystem to elevated CO2

Increased plant productivity under elevated atmospheric CO₂ concentrations might increase soil carbon (C) inputs and storage, which would constitute an important negative feedback on the ongoing atmospheric CO₂ rise. However, elevated CO₂ often also leads to increased soil moisture, which could accelerate the decomposition of soil organic matter, thus counteracting the positive effects via C cycling. We investigated soil C sequestration responses to 5 years of elevated CO₂ treatment in a temperate spring wheat agroecosystem. The application of ¹³C‐depleted CO₂ to the elevated CO₂ plots enabled us to partition soil C into recently fixed C (C_new) and pre‐experimental C (C_old) by ¹³C/¹²C mass balance. Gross C inputs to soils associated with C_new accumulation and the decomposition of C_old were then simulated using the Rothamsted C model ‘RothC.’ We also ran simulations with a modified RothC version that was driven directly by measured soil moisture and temperature data instead of the original water balance equation that required potential evaporation and precipitation as input. The model accurately reproduced the measured C_new in bulk soil and microbial biomass C. Assuming equal soil moisture in both ambient and elevated CO₂, simulation results indicated that elevated CO₂ soils accumulated an extra ～40–50 g C m^?2 relative to ambient CO₂ soils over the 5 year treatment period. However, when accounting for the increased soil moisture under elevated CO₂ that we observed, a faster decomposition of C_old resulted; this extra C loss under elevated CO₂ resulted in a negative net effect on total soil C of ～30 g C m^?2 relative to ambient conditions. The present study therefore demonstrates that positive effects of elevated CO₂ on soil C due to extra soil C inputs can be more than compensated by negative effects of elevated CO₂ via the hydrological cycle.     

Temperature sensitivity of biomass‐specific microbial exo‐enzyme activities and CO2 efflux is resistant to change across short‐ and long‐term timescales

Accurate representation of temperature sensitivity (Q₁₀) of soil microbial activity across time is critical for projecting soil CO₂ efflux. As microorganisms mediate soil carbon (C) loss via exo‐enzyme activity and respiration, we explore temperature sensitivities of microbial exo‐enzyme activity and respiratory CO₂ loss across time and assess mechanisms associated with these potential changes in microbial temperature responses. We collected soils along a latitudinal boreal forest transect with different temperature regimes (long‐term timescale) and exposed these soils to laboratory temperature manipulations at 5, 15, and 25°C for 84 days (short‐term timescale). We quantified temperature sensitivity of microbial activity per g soil and per g microbial biomass at days 9, 34, 55, and 84, and determined bacterial and fungal community structure before the incubation and at days 9 and 84. All biomass‐specific rates exhibited temperature sensitivities resistant to change across short‐ and long‐term timescales (mean Q₁₀ = 2.77 ± 0.25, 2.63 ± 0.26, 1.78 ± 0.26, 2.27 ± 0.25, 3.28 ± 0.44, 2.89 ± 0.55 for β‐glucosidase, N‐acetyl‐β‐d ‐glucosaminidase, leucine amino peptidase, acid phosphatase, cellobiohydrolase, and CO₂ efflux, respectively). In contrast, temperature sensitivity of soil mass‐specific rates exhibited either resilience (the Q₁₀ value changed and returned to the original value over time) or resistance to change. Regardless of the microbial flux responses, bacterial and fungal community structure was susceptible to change with temperature, significantly differing with short‐ and long‐term exposure to different temperature regimes. Our results highlight that temperature responses of microbial resource allocation to exo‐enzyme production and associated respiratory CO₂ loss per unit biomass can remain invariant across time, and thus, that vulnerability of soil organic C stocks to rising temperatures may persist in the long term. Furthermore, resistant temperature sensitivities of biomass‐specific rates in spite of different community structures imply decoupling of community constituents and the temperature responses of soil microbial activities.     

Variables of Microbial Response in Natural Soil Aggregates for Soil Characterization in Different Fluvial Land Shapes

The main objective of this study was to determine changes in microbial response in natural soil aggregates for soil characterization in different fluvial land shapes. This study was carried out in fluvial lands formed on accumulated sediment depositions carried by K?z?l?rmak River. The majority soils of the study area were classified as Typic Ustifluvent and Typic Haplustept in Soil Taxonomy. It was found that macroaggregates (especially >6300 μm and 2000–4750 μm diameters) of all soil samples were higher than microaggregate of soils. In addition, it was determined that the C_org content varies between 0.41–0.91% in soil samples. C_mic content was also found higher level in aggregates involved <250 and 250–425 μm diameters as compared to other aggregate size classes. Moreover, we detected that C_org:C_mic ratio was much higher in macroaggregates than in microaggregate fractions. BR levels were also greater in macroaggregates of >6,300, 4,750–6,300 and 2,000–4,750 μm than in the other macroaggregates sizes and microaggregates. Consequently, macroaggregates have relatively more C_org level than the C_org level in microaggregates, even if the absolute values of C_mic were the lower. This study thus evidenced contrasting microbial habitats and their response in different soil aggregate size formed in various developed soils.     

Soil microbial activities and heavy metal mobility in long-term contaminated soils after addition of EDTA and EDDS

A 40-day incubation experiment was carried out in order to evaluate the microbial activities and heavy metal availability in long-term contaminated arable and grassland soils after addition of EDTA (ethylenediaminetetraacetic acid) or EDDS ([S,S]-ethylenediaminedisuccinic acid). Soils with similar contamination of heavy metal from the vicinity of a lead smelter were used in the experiment. The soil microbial carbon (C_mic) decreased significantly after addition of EDTA in the arable soil (CM1); lesser effects were observed in the grassland soil (CM2). Addition of EDDS caused a decrease of C_mic during the first 10 days of incubation. In the later phases of the experiment, C_mic increased, and even exceeded the amounts found in the control soils. Respiratory activities and metabolic quotients (qCO₂) increased after the addition of the chelating agents into the soils. Higher respiratory activities and qCO₂ were observed in the EDTA-treated soils. The readily available heavy metal fractions were extracted with NH₄NO₃ solution. Readily mobilizable heavy metal fractions of Cd, Pb, Zn, and (in part) Cu increased during the first 3-10 days of incubation in the presence of EDTA. The addition of EDDS particularly increased concentrations of available Cu. Significant correlations between NH₄NO₃-extractable metals, soil respiratory activities, and qCO₂ were found in both soil treatments with EDTA and EDDS. This indicates that enhanced metal mobility seriously affects the microbial processes in experimental soils. In addition, the relationships between NH₄NO₃-extractable Cd, Cu, and the microbial biomass were found in the CM1 soil amended with EDTA.     

Soil-surface carbon dioxide efflux and microbial biomass in relation to tree density 13 years after a stand replacing fire in a lodgepole pine ecosystem

The effects of fire on soil‐surface carbon dioxide (CO₂) efflux, F_S, and microbial biomass carbon, C_mic, were studied in a wildland setting by examining 13‐year‐old postfire stands of lodgepole pine differing in tree density (< 500 to > 500 000 trees ha^?1) in Yellowstone National Park (YNP). In addition, young stands were compared to mature lodgepole pine stands (～110‐year‐old) in order to estimate ecosystem recovery 13 years after a stand replacing fire. Growing season F_S increased with tree density in young stands (1.0 µmol CO₂ m^?2 s^?1 in low‐density stands, 1.8 µmol CO₂ m^?2 s^?1 in moderate‐density stands and 2.1 µmol CO₂ m^?2 s^?1 in high‐density stands) and with stand age (2.7 µmol CO₂ m^?2 s^?1 in mature stands). Microbial biomass carbon in young stands did not differ with tree density and ranged from 0.2 to 0.5 mg C g^?1 dry soil over the growing season; C_mic was significantly greater in mature stands (0.5–0.8 mg C g^?1 dry soil). Soil‐surface CO₂ efflux in young stands was correlated with biotic variables (above‐ground, below‐ground and microbial biomass), but not with abiotic variables (litter and mineral soil C and N content, bulk density and soil texture). Microbial biomass carbon was correlated with below‐ground plant biomass and not with soil carbon and nitrogen, indicating that plant activity controls not only root respiration, but C_mic pools and overall F_S rates as well. These findings support recent studies that have demonstrated the prevailing importance of plants in controlling rates of F_S and suggest that decomposition of older, recalcitrant soil C pools in this ecosystem is relatively unimportant 13 years after a stand replacing fire. Our results also indicate that realistic predictions and modeling of terrestrial C cycling must account for the variability in tree density and stand age that exists across the landscape as a result of natural disturbances.     

云贵高原喀斯特坡耕地土壤微生物量 C、N、P空间分布

土壤微生物是地球生物演化进程中的先锋种类,具有重要的生态修复功能,但空间分布格局是否存在的争议很大。以云贵高原典型喀斯特坡耕地为对象,基于网格法取样,用经典统计学和地统计学综合分析了土壤微生物生物量的空间变异特征。结果表明,云贵高原喀斯特坡耕地土壤微生物生物量碳(C_mic)、磷(P_mic)以及碳氮比(C_mic/N_mic)适宜,氮(N_mic)的含量较低,变异均很大,空间自相关性明显,最佳拟合模型均为指数模型。块金值C₀较小(0.0016-0.0087),C₀/(C₀+C)均<25%(2.6%-10.2%),变程a较短(22.2-51.0 m),其强烈的空间变异主要由结构性变异引起。Kriging等值线图表明,C_mic、N_mic和C_mic/N_mic的高值区分布在坡的中上部,P_mic的高值区则在坡的中下部和坡脚。云贵高原喀斯特坡耕地土壤微生物不仅存在着小尺度的空间分布格局,而且不同土壤微生物属性的空间分布不同。     

Phytoremediation affects microbial development on a limestone quarry

Phytoremediation was used to regenerate a limestone quarry area. Plant growth mixed medium added over the quarry surface, consisting of a mixture of pyrolusite byproducts, natural soil, sand, and rice husk. Three different plant species: pine, cypress, and broom were planted at 9 randomized plots in order to assess the effects of vegetation on the microbial development, which was measured for the following 3 years. Substrate samples were analyzed for organic carbon content (C_org), microbial biomass (C_mic), basal CO₂ respiration activity (BR), alkaline phosphatase (ALP), and acid phosphatase activities at each plant specie and year. Furthermore, the ratio C_mic/C_org, the metabolic quotient (qCO₂), and the C mineralization quotient (qM) were determined. The highest survival rates occurred for broom (93.52%), followed by cypress and pine (82.41%) at the final year, while the content of C_mic, BR, and ALP was increased significantly under plants (pine, cypress, and broom) compared with control. C_mic content and BR was plant dependent. Cypress sites had the highest values of C_mic (214.9 μgCg^?1) and BR (112.8 μgCO₂-Cg^?1d^?1) at the 3^rd year. The plant root environment clearly enhances and regulates the microbial community, in correspondence to the species used. Below ground enhanced activity could fulfill the scope of phytoremediation strategies.     

Estimating soil carbon sequestration under elevated CO2 by combining carbon isotope labelling with soil carbon cycle modelling

Elevated CO₂ concentrations generally stimulate grassland productivity, but herbaceous plants have only a limited capacity to sequester extra carbon (C) in biomass. However, increased primary productivity under elevated CO₂ could result in increased transfer of C into soils where it could be stored for prolonged periods and exercise a negative feedback on the rise in atmospheric CO₂. Measuring soil C sequestration directly is notoriously difficult for a number of methodological reasons. Here, we present a method that combines C isotope labelling with soil C cycle modelling to partition net soil sequestration into changes in new C fixed over the experimental duration (C_new) and pre‐experimental C (C_old). This partitioning is advantageous because the C_new accumulates whereas C_old is lost in the course of time (ΔC_new>0 whereas ΔC_old<0). We applied this method to calcareous grassland exposed to 600 μL CO₂ L^?1 for 6 years. The CO₂ used for atmospheric enrichment was depleted in ¹³C relative to the background atmosphere, and this distinct isotopic signature was used to quantify net soil C_new fluxes under elevated CO₂. Using ¹³C/¹²C mass balance and inverse modelling, the Rothamsted model ‘RothC’ predicted gross soil C_new inputs under elevated CO₂ and the decomposition of C_old. The modelled soil C pools and fluxes were in good agreement with experimental data. C isotope data indicated a net sequestration of ≈90 g C_new m^?2 yr^?1 in elevated CO₂. Accounting for C_old‐losses, this figure was reduced to ≈30 g C m^?2 yr^?1 at elevated CO₂; the elevated CO₂‐effect on net C sequestration was in the range of≈10 g C m^?2 yr^?1. A sensitivity and error analysis suggests that the modelled data are relatively robust. However, elevated CO₂‐specific mechanisms may necessitate a separate parameterization at ambient and elevated CO₂; these include increased soil moisture due to reduced leaf conductance, soil disaggregation as a consequence of increased soil moisture, and priming effects. These effects could accelerate decomposition of C_old in elevated CO₂ so that the CO₂ enrichment effect may be zero or even negative. Overall, our findings suggest that the C sequestration potential of this grassland under elevated CO₂ is rather limited.     

Soil Amendment with <Emphasis Type="Italic">Pseudomonas fluorescens</Emphasis> CHA0: Lasting Effects on Soil Biological Properties in Soils Low in Microbial Biomass and Activity

Pseudomonas fluorescens strains are used in agriculture as plant growth-promoting rhizobacteria (PGPR). Nontarget effects of released organisms should be analyzed prior to their large-scale use, and methods should be available to sensitively detect possible changes in the environments the organism is released to. According to ecological theory, microbial communities with a greater diversity should be less susceptible to disturbance by invading organisms. Based on this principle, we laid out a pot experiment with field-derived soils different in their microbial biomass and activity due to long-term management on similar parent geological material (loess). We investigated the survival of P. fluorescens CHA0 that carried a resistance toward rifampicine and the duration of potential changes of the soil microflora caused by the inoculation with the bacterium at the sowing date of spring wheat. Soil microbial biomass (C _mic, N _mic) basal soil respiration (BR), qCO₂, dehydrogenase activity (DHA), bacterial plate counts, mycorrhiza root colonization, and community level substrate utilization were analyzed after 18 and 60 days. At the initial stage, soils were clearly different with respect to most of the parameters measured, and a time-dependent effect between the first and the second set point were attributable to wheat growth and the influence of roots. The effect of the inoculum was small and merely transient, though significant long-term changes were found in soils with a relatively low level of microbial biomass. Community level substrate utilization as an indicator of changes in microbial community structure was mainly changed by the growth of wheat, while other experimental factors were negligible. The sensitivity of the applied methods to distinguish the experimental soils was in decreasing order N _mic, DHA, C _mic, and qCO₂. Besides the selective enumeration of P. fluorescens CHA0 rif⁺, which was only found in amended soils, methods to distinguish the inoculum effect were DHA, C _mic, and the ratio of C _mic to N _mic. The sampling time was most sensitively indicated by N _mic, DHA, C _mic, and qCO₂. Our data support the hypothesis—based on ecosystem theory—that a rich microflora is buffering changes due to invading species. In other words, a soil-derived bacterium was more effective in a relatively poor soil than in soils that are rich in microorganisms.     

Linking microbial activity and soil organic matter transformations in forest soils under elevated CO2

Soil organic matter (SOM) dynamics ultimately govern the ability of soil to provide long‐term C sequestration and the nutrients required for ecosystem productivity. Predicting belowground responses to elevated CO₂ requires an integrated understanding of SOM transformations and the microbial activity that governs them. It remains unclear how the microorganisms upon which these transformations depend will function in an elevated CO₂ world. This study examines SOM transformations and microbial metabolism in soils from the Duke Free Air Carbon Enrichment site in North Carolina, USA. We assessed microbial respiration and net nitrogen (N) mineralization in soils with and without elevated CO₂ exposure during a 100‐day incubation. We also traced the depleted C isotopic signature of the supplemental CO₂ into SOM and the soils' phospholipid fatty acids (PLFA), which serve as biomarkers for living cells. Cumulative net N mineralization in elevated CO₂ soils was 50% that in control soils after a 100‐day incubation. Respiration was not altered with elevated CO₂. C : N ratios of bulk SOM did not change with elevated CO₂, but incubation data suggest that the C : N ratios of mineralized organic matter increased with elevated CO₂. Values of SOM δ¹³C were depleted with elevated CO₂ (?26.7±0.2 vs. ?30.2±0.3‰), reflecting the depleted signature of the supplemental CO₂. We compared δ¹³C of individual PLFA with the δ¹³C of SOM to discern incorporation of the depleted C isotopic signature into soil microbial groups in elevated CO₂ plots. PLFA i15:0, a15:0, and 10Met18:0 reflected significant incorporation of recently produced photosynthate, suggesting that the bacterial groups defined by these biomarkers are active metabolizers in elevated CO₂ soils. At least one of these groups (actinomycetes, 10Met18:0) specializes in metabolizing less labile substrates. Because control plots did not receive an equivalent ¹³C tracer, we cannot determine from these data whether this group of organisms was stimulated by elevated CO₂ compared with these organisms in control soils. Stimulation of this group, if it occurred in the elevated CO₂ plot, would be consistent with a decline in the availability of mineralizable organic matter with elevated CO₂, which incubation data suggest may be the case in these soils.     

No overall stimulation of soil respiration under mature deciduous forest trees after 7 years of CO2 enrichment

The anthropogenic rise in atmospheric CO₂ is expected to impact carbon (C) fluxes not only at ecosystem level but also at the global scale by altering C cycle processes in soils. At the Swiss Canopy Crane (SCC), we examined how 7 years of free air CO₂ enrichment (FACE) affected soil CO₂ dynamics in a ca. 100‐year‐old mixed deciduous forest. The use of ¹³C‐depleted CO₂ for canopy enrichment allowed us to trace the flow of recently fixed C. In the 7th year of growth at ～550 ppm CO₂, soil respiratory CO₂ consisted of 39% labelled C. During the growing season, soil air CO₂ concentration was significantly enhanced under CO₂‐exposed trees. However, elevated CO₂ failed to stimulate cumulative soil respiration (R_s) over the growing season. We found periodic reductions as well as increases in instantaneous rates of R_s in response to elevated CO₂, depending on soil temperature and soil volumetric water content (VWC; significant three‐way interaction). During wet periods, soil water savings under CO₂‐enriched trees led to excessive VWC (>45%) that suppressed R_s. Elevated CO₂ stimulated R_s only when VWC was ≤40% and concurrent soil temperature was high (>15 °C). Seasonal Q₁₀ estimates of R_s were significantly lower under elevated (Q₁₀=3.30) compared with ambient CO₂ (Q₁₀=3.97). However, this effect disappeared when three consecutive sampling dates of extremely high VWC were disregarded. This suggests that elevated CO₂ affected Q₁₀ mainly indirectly through changes in VWC. Fine root respiration did not differ significantly between treatments but soil microbial biomass (C_mic) increased by 14% under elevated CO₂ (marginally significant). Our findings do not indicate enhanced soil C emissions in such stands under future atmospheric CO₂. It remains to be shown whether C losses via leaching of dissolved organic or inorganic C (DOC, DIC) help to balance the C budget in this forest.     

Atmospheric CO2 elevation has little effect on nitrifying and denitrifying enzyme activity in four European grasslands

The objective of this study was to determine what patterns, if any, existed in the response of nitrifying enzyme activity (NEA), denitrifying enzyme activity (DEA), soil microbial N and soil inorganic N to elevated CO₂ across a broad range of grassland environments. We studied the response of these N pools and microbial activities in four CO₂‐enrichment sites of the MEGARICH project (Managing European Grasslands as a Sustainable Resource in a Changing Climate). CO₂ treatment was studied in factorial combination with a cutting frequency treatment at two sites and with a temperature treatment at one site. Our study showed that microbial biomass N, NEA, DEA and extractable soil [NH₄⁺] and [NO₃^?] were generally not affected by elevated CO₂ in these grassland ecosystems after several years of treatment, nor by cutting frequency or temperature at the sites that included these treatments. Exceptions to this were that DEA and soil [NO₃^?] decreased by 22% and 45%, respectively, at the French site at elevated CO₂. We discuss the possible explanations for this lack of response.