Special traits of biology and of the parasite fauna of juvenile salmonid fish of the genus <Emphasis Type="Italic">Salmo</Emphasis> of the Tornio River system (The Baltic Sea basin)

Juveniles of Atlantic salmon Salmo salar and trout S. trutta populating the system of the Tornio River (the Baltic Sea basin) are investigated. The obtained parasitological data indicate the absence of rigid spatial and food competition between juvenile salmon and trout in the case of their cohabitation.     

Polymorphism of smolts of pink salmon <Emphasis Type="Italic">Oncorhynchs gorbuscha</Emphasis> in the Indera River (Kola Peninsula)

Pink salmon introduced into the White Sea started to exploit as spawning grounds middle and upper reaches of the river 20 years after its appearance in the Indera River. As a result of this, the migration pathway of smolts and late smolts appeared in addition to early smolts. The intraspecies polymorphism of smolts is confirmed by differences of early and late smolts by body length and weight, migration dates, food spectrum, and indices of stomach fullness. The food spectra of late juveniles of pink salmon coincide with those of parr of Atlantic salmon Salmo salar and of brown trout S. trutta. Greater abundance of late migrants of pink salmon may cause competition of these species for food.     

Upstream passage problems for wild Atlantic salmon (<Emphasis Type="Italic">Salmo salar</Emphasis> L.) in a regulated river and its effect on the population

Due to hydropower development, the upstream migration of wild anadromous salmon and brown trout is impaired in many European rivers, causing negative effects on the long-term survival of natural salmonid populations. This study identified problems for Atlantic salmon during upstream migration in a regulated river in northern Sweden, Umeälven (mean flow: 430 m³ s^?1). Tagging from 1995 to 2005 involved radio tags (n = 503), PIT tags (n = 1574) and Carlin tags (n = 573) to study the spawning migration of salmon from the coast past the regulated section of the river to a fish ladder at the dam/spillway 32 km upriver. The results demonstrate that migration success from the coast to the fish ladder varied between 0% and 47% among years, indicating an average loss of 70% of potential spawners. Discharge from the turbines attracted the salmon away from the bypass route. Echo-sounding in the turbine outlet showed that salmon were normally found at 1–4 m depths. They responded with upstream and/or downstream movements depending on flow changes; increased spill in the bypass channel attracted salmon to the bypass. Once in the bypass channel, salmon could be delayed and had difficulties passing the first rapid at high spills. Additional hindrances to upstream migration were found at rapids and the area of the fish ladder, located further upstream in the regulated river section. The average migration duration was 44 days from the estuary to the top of the fish ladder, with large variation among individuals within years. Modelling the salmon population dynamics showed a potential population increase of 500% in 10 years if the overall migration success could be improved from the current 30% to levels near 75%. Consequently improved migration facilities at the regulated river section should be implemented to achieve a long-term sustainability of these threatened anadromous salmonids.     

Movements of lumpsucker females in a northern Norwegian fjord during the spawning season

The lumpsucker Cyclopterus lumpus is distributed throughout the North Atlantic Ocean and migrates considerable distances between offshore feeding areas and shallow inshore spawning grounds. The number of the lumpsucker has declined since the mid 1980s, probably as a result of overexploitation. The lumpsucker is the preferred host of the sea louse Caligus elongates, which is a problem for marine aquaculture. However, little is known about the biology of the lumpsucker. The aims of the study were to 1) examine the movements of female lumpsucker during the spawning migration, and 2) assess the potential for lumpsucker to act as a vector for transmission of parasites and diseases between aquaculture farms and wild fish. Twenty female lumpsuckers tagged with acoustic transmitters were released during the spawning season in the inner part of Øksfjord, northern Norway and their distribution was recorded by 22 automatic acoustic receivers. The average time until departure from the fjord was 3 days, and within 1 week all fish had left the fjord. Timing of departure from the fjord was unrelated with either tidal current patterns or the time of the day. A high proportion of the fish (75%) were recorded within 200 m of fish farms, but they did not stay for extended periods at these farms. Our results suggest that mature female lumpsucker exhibit a movement pattern characterized by rapid fjord-scale migrations during the spawning season, and that they are not attracted to salmon farms in the same way as a range of other fish species.     

A first insight into the intestinal microbiota of snow trout (<Emphasis Type="Italic">Schizothorax zarudnyi</Emphasis>)

This study addresses the biodiversity profile of bacterial community in the intestinal lumen and mucosa of snow trout fish by applying 16S rRNA gene 454-pyrosequencing. A total of 209,106 sequences with average length 689 (±53) were filtered, denoised, trimmed, and then sorted into OTUs based on 97 % sequence similarity using the USEARCH software pipeline. Bacteria representing 10 phyla were found in the samples investigated. Fimicutes ribotypes were present in intestinal-mucosa and lumen in all fish and often dominated the libraries (average 43 and 38 %, respectively). Proteobacteria were also prevalent, but at a lower relative abundance, at 22 and 29 % in mucosa and lumen, respectively. The autochthonous microbiota was dominated by sequences belonging to the Bacilli (mean sequence abundance 24 %), in particular the Lactobacillaceae, with Lactobacillus and Pediococcous being the most abundant genera. Fewer Bacilli (mean sequence abundance 22 %) and Actinobacteria (2 %) were present in the lumen, and allochthonous communities consisted of a more even split among the bacterial classes, with increases in sequences assigned to members of the γ-Proteobacteria (16 %) and Fusobacteriia (8 %). The principal bacterial genera recorded in the lumen belonged to the lactic acid bacteria group, Cetobacterium, Clostridium and Synechococcus. Results obtained suggest that the lumen and mucosal layer of the snow trout intestine may host different microbial communities. Moreover, both regions harbour a diverse microbiome with a greater microbial diversity in the intestinal mucus compared with the luminal communities of the fish. Many of these microbes might be of high physiological relevance for the fish and may play key roles in the functioning of its gut.     

Geographic and temporal genetic structure in <Emphasis Type="Italic">Lepeophtheirus salmonis</Emphasis> from four salmon farms along the northwest and west coasts of Ireland: results from a microsatellite analysis

The marine ectoparasitic copepod of salmonids, Lepeophtheirus salmonis (Krøyer), is a major pest of farmed Atlantic salmon (Salmo salar L.) causing great economic impact. The spatial scales over which L. salmonis populations in different salmon farms are typically connected, and the temporal scales over which L. salmonis from the same farm typically undergo genetic change are largely unknown. These questions were posed in a small-scale geographic study of population structure in L. salmonis from four salmon farms, along the northwest and west coasts of Ireland, using two outgroups from Norway and Canada. The temporal stability of genetic composition was also studied in samples collected quarterly during one year from one salmon farm in Ireland. Genetic composition in L. salmonis was characterised using four nuclear microsatellites. Significant but low genetic differentiation was observed between all sites (F _ST = 0.08), with no evidence that differentiation was correlated with geographic distance. Temporal genetic differentiation was also evident (F _ST = 0.07). An analysis of all L. salmonis samples except the ones from Norway detected two separate clusters. Each cluster contained both geographical and temporal samples. These results are consistent with a population model in which L. salmonis in salmon farms along the northwest and west coasts of Ireland are not isolated, but are potentially subject to (i) localised ecological factors at the particular farm sites or (ii) selection post-settlement or a combination thereof.     

Cardiovascular responses of three salmonid species affected with amoebic gill disease (AGD)

The cardiovascular effects of amoebic gill disease (AGD) were investigated immediately following surgery in three salmonid species; Atlantic salmon (Salmo salar L.), brown trout (Salmo trutta L.) and rainbow trout (Oncorhynchus mykiss Walbaum). Fish, both naïve (control) and infected (AGD-affected) of each species, were fitted with dorsal aorta catheters and cardiac flow probes. Cardiac output and dorsal aortic pressures were then continuously measured over a 6-h period following surgery. Results showed that Atlantic salmon, brown trout and rainbow trout displayed similar dorsal aortic pressure, cardiac output, and systemic vascular resistance (mean dorsal aotic pressure divided by cardiac output) values. However, the only significant differences relating to disease status i.e. infected or control, were found in Atlantic salmon. Although no significant differences were seen in dorsal aortic pressure values, AGD-affected salmon displayed significantly elevated systemic vascular resistance at 4 and 6 h post surgery. Cardiac output was also approximately 35% lower in AGD-affected salmon compared to the non-affected control counterparts. These results comparatively examine cardiac function in response to AGD across three salmonid species and highlight species-specific cardiovascular responses that occur in association with disease. It is suggested that the apparent cardiac dysfunction seen in AGD-affected Atlantic salmon could, under stressful conditions, become exacerbated. Cardiac failure is therefore suggested to be a possible physiological mechanism by which AGD causes or contributes to mortality in Atlantic salmon.     

Distribution pattern of Polar cod (<Emphasis Type="Italic">Boreogadus saida</Emphasis>) larvae and larval fish assemblages in relation to oceanographic parameters in the northern Bering Sea and Chukchi Sea

Polar cod, Boreogadus saida, is a key species in the Arctic Ocean ecosystem. We examined the distribution pattern of B. saida and other fish larvae in relation to oceanographic parameters, including sea surface temperature and salinity (SST and SSS), the mode of temperature and salinity within the water column (F _temp and F _sal), and the temporal duration between the date of sea ice retreat and the date of field surveys (dSRT) in the northern Bering Sea and Chukchi Sea during the summers of 2008 and 2013. Sampling was conducted onboard the T/S Oshoro-Maru using a bongo net for 2 years. At sampling stations, the temperature and salinity were measured using conductivity-temperature-depth profiler casts. We calculated dSRT from satellite derived polar gridded sea ice concentration data. A total of 1186 individuals comprising 7 families and 16 species were collected, with B. saida (35 %) and Ammodytes hexapterus (27 %) dominating the catch in number. Based on the species composition (cluster analysis), the sampling stations were divided into four groups. Pleuronectidae dominated group A, which was characterized by relatively high temperature (SST and F _temp), while B. saida dominated group B, characterized by low temperatures. A. hexapterus dominated group C and D, which had similar temperatures and salinities, but group C had a shorter dSRT than group D. The latter was also differentiated by the presence of Lumpenus sp. B. saida, which were most abundant in regions where temperatures ranged from ?2 to 0.5 °C. These results, the geographical variation of group B sampling stations, suggest there are two separate spawning areas characterized by similar fish communities and related to consistently cold bottom temperatures. Moreover, stations with a higher abundance of smaller sized larval B. saida were characterized by a short dSRT, whereas stations with a lower abundance and a larger size were characterized by a long dSRT.     

Mixing rates in weakly differentiated stocks of greater amberjack (<Emphasis Type="Italic">Seriola dumerili</Emphasis>) in the Gulf of Mexico

The greater amberjack (Seriola dumerili) is a commercially and recreationally important marine fish species in the southeastern United States, where it has been historically managed as two non-mixing stocks (Gulf of Mexico and Atlantic). Mark-recapture studies and analysis of mitochondrial DNA have suggested the two stocks are demographically independent; however, little is currently known about when and where spawning occurs in Gulf of Mexico amberjack, and whether stock mixture occurs on breeding grounds. The primary objective of this study was to quantify stock mixture among breeding populations of amberjack collected from the Atlantic and Gulf of Mexico. Genetic data based on 11 loci identified very low, though statistically significant differentiation among Gulf of Mexico samples (G_ST = 0.007, \(G_{{{\text{ST}}}}^{\prime }\) = 0.009; all P?=?0.001) and between reproductive adults collected from two spawning areas (G_ST = 0.007, \(G_{{{\text{ST}}}}^{\prime }\) = 0.014; all P?=?0.001). Naïve Bayesian mixture analysis supported a single genetic cluster [p(S|data)?=?0.734] whereas trained clustering (using Atlantic and Gulf spawning fish) gave the highest support to a two-cluster model (p(S|data)?=?1.0). Our results support the argument that the genetic structuring of greater amberjack is more complex than the previously assumed two, non-mixing stock model. Although our data provide evidence of limited population structure, we argue in favour of non-panmixia among reproductive fish collected from the Gulf of Mexico and Florida Keys.     

Life strategies of mykiss <Emphasis Type="Italic">Parasalmo mykiss</Emphasis> and trout <Emphasis Type="Italic">Salmo trutta</Emphasis> introduced in water bodies of Chili

Materials of preliminary investigations of the life strategy of mykiss Parasalmo mykiss and trout Salmo trutta introduced to water bodies of Chili are considered. Analysis of the structure of scales demonstrated that, in mykiss and trout, the estuarine and riverine-estuarine types of life strategy prevail. This seems to be related to good feeding conditions in fjords. The hypothesis is suggested that, in the area of Chilean fjords, the successful introduction to rivers and artificial rearing in cages in brackish water resulted in the formation of a peculiar and highly dynamic population system. Elements of this system are from both fish of natural self-reproducing populations and fish grown in cages. There is a continuous exchange with genetic information between them as the fish that have escaped from cages attain maturity, arrive to rivers for spawning, and reproduce together with wild fish.     

Difference on reproductive trait of skipjack tuna <Emphasis Type="Italic">Katsuonus pelamis</Emphasis> female between schools (free vs FAD school) in the tropical western and central Pacific Ocean

In order to clarify the difference on reproductive traits of female skipjack tuna between fish aggregation device (FAD) and free-swimming (Free) school, we examined the relative condition factor and sex ratio, minimum size at first maturity and spawning fraction in tropical western and central Pacific Ocean. The relative condition factor in developing (FAD: 1.00 ± 0.06, Free: 1.05 ± 0.07) and spawning capable phase (FAD: 1.01 ± 0.06, Free: 1.04 ± 0.06) was higher in the free-swimming school than those in the fish aggregation device school (p < 0.01). The proportion of mature fish was significant difference between each schools (p < 0.05). The sex ratios in the schools were not biased (p > 0.05). Observed minimum size at first maturity were 40.0 cm FL in FAD and 42.5 cm FL in free-swimming school. Spawning capable fish were observed year around in FAD and for seven months in free-swimming school. The estimated total spawning fractions based on the postovulatory follicle method were 0.50 and 0.49 in the FAD and free-swimming schools, respectively. These results suggested that differences in the school type did not affect inherent spawning characteristics (i.e. sex ratio, minimum size at first maturity, or spawning season) and may shortly affect the oogenesis throughout the food availability.     

Genome incompatibility between rainbow trout (<Emphasis Type="Italic">Oncorhynchus mykiss</Emphasis>) and sea trout (<Emphasis Type="Italic">Salmo trutta</Emphasis>) and induction of the interspecies gynogenesis

Rainbow trout (Oncorhynchus mykiss Walbaum) and sea trout (Salmo trutta Linnaeus, 1758) show large karyotypic differences and their hybrid offspring is not viable due to unstable karyotype and chromosome fragmentation. However, gametes from these two species were used to induce gynogenetic development. Rainbow trout eggs activated by UV-irradiated sea trout sperm were subjected to high hydrostatic pressure (HHP) shock to prevent release of the 2nd polar body (early shock) or to inhibit the first cleavage (late shock) in order to produce diploid meiotic gynogenotes and gynogenetic doubled haploids (DHs), respectively. Cytogenetic analysis proved fish that development was induced by the sea trout spermatozoa were rainbow trout. In turn, molecular examination confirmed homozygosity of the gynogenetic DHs. Presumed appearance of the recessive alleles resulted in lower survival of the gynogenetic DH larvae (~25%) when compared to survival of the heterozygous (meiotic) gynogenotes (c. 50%). Our results proved that genomic incompatibilities between studied trout species result in the hybrid unviability. However, artificial gynogenesis including activation of rainbow trout eggs with UV-irradiated sea trout spermatozoa was successfully induced. As both species are unable to cross, application of the UV-irradiated sea trout spermatozoa to activate rainbow trout development assures only maternal inheritance with no contamination by the residues of the paternal chromosomes.     

Properties of Probiotics <Emphasis Type="Italic">Kocuria</Emphasis> SM1 and <Emphasis Type="Italic">Rhodococcus</Emphasis> SM2 Isolated from Fish Guts

This study characterized probiotics Kocuria SM1 and Rhodococcus SM2, which were recovered from the intestinal microbiota of rainbow trout (Oncorhynchus mykiss, Walbaum). The cultures were Gram-positive, non-motile, catalase-positive and oxidase-negative cocci or rods. Cell multiplication of SM1 and SM2 was observed at 4–37 °C (45 °C for SM1), in 0–20% (w/v) NaCl and at pH 2–11. The viability was not affected when exposed to pepsin at pH 2.0 and 3.0, and pancreatin at pH 8.0. Neither isolates were chrome azurol S-positive for siderophore production. Of the 19 common enzymes analysed using the API-ZYM system, only 8 were evident in the culture of SM1 compared to 11 enzymes for SM2. The secondary metabolites of both probiotics were inhibitory to Acinetobacter baumannii, Vibrio anguillarum and V. ordalii; SM2 inhibited Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa and Staphylococcus aureus. SM2 was resistant to penicillin and sulphatriad, out of six antimicrobial agents; SM1 was resistant to sulphatriad. These results suggest that Kocuria SM1 and Rhodococcus SM2 are able to grow over a wide range of temperature, salinity and pH, including in conditions that mimic the gastrointestinal environment of fish and produce extracellular enzymes that may have a role in the host digestive processes. Importantly, Rhodococcus SM2 displays a high degree of bacteriocinogenic potential against multi-drug-resistant human pathogens that have never been documented among the gut microbiota of fish.     

Fatty acid composition of sprat (<Emphasis Type="Italic">Sprattus sprattus</Emphasis>) and herring (<Emphasis Type="Italic">Clupea harengus</Emphasis>) in the Baltic Sea as potential prey for salmon (<Emphasis Type="Italic">Salmo salar</Emphasis>)

Sprat (Sprattus sprattus) and small herring (Clupea harengus) are the dominant prey fish of Atlantic salmon (Salmo salar) in the Baltic Sea. If the fatty acid (FA) proportions of sprat and herring differ, the dietary history of ascending salmon could be determined from their FA profiles. Therefore, we investigated the FA composition of several age groups of whole sprat and small herring, caught from the three main feeding areas of salmon in autumn and spring. Oleic acid (18:1n-9) was the most prevalent FA in sprat and characteristic of this species. In herring, palmitic acid (16:0) was the most common FA, but herring lipid was characterized by n-6 polyunsaturated FAs, and moreover, by palmitoleic acid (16:1n-7) and vaccenic acid (18:1n-7). Due to the higher lipid content of sprat, the concentrations of all other FAs, excluding these, were higher in sprat than in herring. The concentration of docosahexaenoic acid (DHA, 22:6n-3) increased with an increase in the lipid content and was consequently highest in the youngest specimens, being in young sprat almost double that of young herring, and 2.6 times higher in the sprat biomass than in that of herring. As a result of a decrease in the DHA concentration with age, the ratio thiamine/DHA increased with respect to age in both species, and was lower in sprat than in herring. It is concluded that an abundance of DHA in the diet of salmon most likely increases oxidative stress because of the susceptibility of DHA to peroxidation, and thus decreases thiamine resources of fasting, prespawning salmon. Because the FA composition of sprat and herring differs, and the relative abundancies of prey fish differ between the feeding areas of salmon, the feeding area of ascending salmon can most probably be derived by comparing their FA profiles.     

Assessment of movements and habitat use of <Emphasis Type="Italic">Salmo opimus</Emphasis> in Fırnız stream,river Ceyhan of Turkey using radio telemetry techniques

This study was carried out to provide information about movement and habitat use by an endemic Salmonid species (Salmo opimus Turan et al. Ichthyol Explor Freshw 23: 219–236, Turan et al. 2012) in F?rn?z Stream, a tributary of River Ceyhan in Turkey, using manual tracking as a radio telemetry technique. During the study, 19 of the 23 tagged trout were relocated by eight to 20 times (mean: 15 relocations per fish) in F?rn?z Stream. The time between the tracking surveys and relocations varied from 21 to 44 days (mean: 30 days) and the mean distance between relocations was 151 m (26 to 881 m). Tagged trout showed a distribution within a distance of 9350 m in F?rn?z Stream. 95% of the relocations clustered at a distance of 4500 m, while 75 and 50% of them were distributed at a distance of 1935 m and 1488 m, respectively. The linear home range of the individual ranged from 199 to 5087 m (mean 792 m), whereas mean 95% Kernel Density Home Range (KDHR), 75% KDHR, and mean core range (50% KDHR), were 632 m, 477 m and 290 m, respectively. The depths and velocities of the locations where tagged trout occurred varied from 20 to 185 cm (mean depth: 43 cm) and 11 to 240 cm/s (mean velocity: 45.9 cm/s). There was no correlation between fish size and depth and fish size and velocity. Hydropower stations and trout farms negatively affected movement of the brown trout in the stream. The fish passage in F?rn?z Hydropower Station (HPP) is inefficient due to low water mark downstream. Thus, all the obstructions that prevent fish movements must be arranged to enable fish passage in F?rn?z Stream in order to preserve the brown trout population in the stream.     

Continued feeding on <Emphasis Type="Italic">Diporeia</Emphasis> by deepwater sculpin in Lake Huron

Monitoring changes in diets of fish is essential to understanding how food web dynamics respond to changes in native prey abundances. In the Great Lakes, Diporeia, a benthic macroinvertebrate and primary food of native benthivores, declined following the introduction of invasive Dreissena mussels and these changes were reflected in fish diets. We examined the diets of deepwater sculpin Myoxocephalus thompsonii collected in bottom trawls during 2010–2014 in the main basin of Lake Huron, and compared these results to an earlier diet study (2003–2005) to assess if their diets have continued to change after a prolonged period of Dreissena mussel invasion and declined Diporeia densities. Diporeia, Mysis, Bythotrephes, and Chironomidae were consumed regularly and other diet items included ostracods, copepods, sphaerid clams, and fish eggs. The prey-specific index of relative importance calculated for each prey group indicated that Mysis importance increased at shallow (≤55 m) and mid (64–73 m) depths, while Diporeia importance increased offshore (≥82 m). The average number of Diporeia consumed per fish increased by 10.0% and Mysis decreased by 7.5%, while the frequency of occurrence of Diporeia and Mysis remained comparable between time periods. The weight of adult deepwater sculpin (80 mm and 100 mm TL bins) increased between time periods; however, the change in weight was only significant for the 80 mm TL group (p?<?0.01). Given the historical importance of Diporeia in the Great Lakes, the examination of deepwater sculpin diets provides unique insight into the trophic dynamics of the benthic community in Lake Huron.     

The post‐spawning movements of migratory brown trout Salmo trutta L.

The post spawning behaviour of sea trout Salmo trutta was studied over a 2 year period in the river and estuary of the River Fowey, south‐west England. Forty‐five sea trout kelts were trapped immediately after spawning in December and intraperitoneally tagged with miniature acoustic transmitters. The subsequent emigration into coastal waters was monitored using acoustic receivers deployed throughout the river catchment. The levels of gill Na⁺K⁺ATPase activity in sea trout kelts sampled at the same time as the tagged fish were within the range of 2·5 to 4·5 μmol Pi per mg protein per h indicating that the post‐spawning fish were not physiologically adapted to salt water. The tagged kelts were resident in fresh water between 4 and 70 days before entering the estuary. Sixty two per cent of the tagged kelts subsequently migrated successfully into coastal waters, with a higher success rate for male fish (75%) than females (58%). There was a significant size related difference in the run‐timing of the kelts with the larger fish moving more quickly into coastal waters after spawning than smaller fish. Seaward migration within fresh water was predominantly nocturnal and generally occurred in conjunction with increasing river discharge and rising water temperature. Migration through the estuary continued to be predominantly nocturnal and occurred during an ebbing tide. Residency within the estuary varied amongst individuals although it was invariably short, with most fish moving out into coastal waters within one to two tidal cycles. Five tagged kelts returned from the coastal zone and re‐entered fresh water during April and June. Marine residence time varied between 89 and 145 days (mean 118 days) and the minimum estimated marine survival was c. 18%. One of these sea trout was subsequently recaptured after successfully spawning in the vicinity where it had been previously tagged demonstrating a degree of spawning site fidelity.