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1.
Multiple sightings of a distinctive but unidentified species of beaked whale have been made in the eastern tropical Pacific. The unidentified whale has two color morphs: a conspicuously marked black and white form (judged to be larger), and a uniformly gray-brown form. Maximum length estimates have been 5–5.5 m. Other features include a relatively flat head, with a small, distinct melon; a moderately long beak; and a low, wide-based, triangular dorsal fin. On most animals the trailing edge of the dorsal fin is only slightly falcate and often appears straight. On the black and white morph, a broad white or cream-colored swathe originates immediately posterior to the dorsal surface of the head and runs posterio-ventrally on either side of the animal. The prevalence of scarring on the black and white animals suggests sexual dimorphism and that these larger, more conspicuously marked animals are adult males, while the smaller, browner, unscarred animals are females and young. Possibilities for identification include: 1) a well-marked race of a known Mesoplodon sp., 2) Mesoplodon (Indopacetus) pacificus or 3) an undescribed species.  相似文献   

2.
Methods are described for measuring the colonisation of a radish (Raphanus sativus) root system by seedlings with rifampicin resistant fluorescent pseudomonads by dilution plating, and which would take account of differences in root morphology. Differences in the levels of pseudomonad colonisation was highly dependent on the units in which surface areas was expressed. Population levels are expressed using estimates of surface area based on root length, tap-root length and root weight. The best estimate of surface area was root length, but the most practical method was surface area calculated as a function of dry weight. This method could differentiate differences in the levels of root colonisation independent of differences in root morphology and was efficient enough to allow the routine processing of a large number of replicate root samples.  相似文献   

3.
We examined sources of variability in stature, body mass, and body mass index (BMI) in families of black and white elementary schoolchildren from Philadelphia, Pennsylvania. The sample consisted of 445 black and 379 white children, 7-13 years old, and their parents (total n = 2016). The sample was distributed among 596 nuclear families, each representing an independent pedigree. Maximum-likelihood-based variance decomposition methods were used to simultaneously estimate ethnic group-specific effects of genes, sex, age by sex, and unmeasured environmental factors on stature, body mass, and BMI. Likelihood ratio tests were performed to assess the significance of h2 estimates and differences in sigma g and sigma e between black and white families. Genes account for moderate proportions of the phenotypic variance (h2) of these traits in black and white children. In black and white children, respectively, h2 estimates were 0.37 and 0.53 for stature, 0.37 and 0.31 for body mass, and 0.38 and 0.24 for BMI (p < 0.0005). Although the differences in h2 between ethnic groups were not significant (stature, p = 0.23; body mass, p = 0.49; BMI, p = 0.14), black children exhibited a significantly greater total residual phenotypic standard deviation (sigma e and sigma g) in body mass and BMI and a significantly greater sigma e for stature compared with white children. The larger residual phenotypic variance in the black sample is likely due to exposure to unmeasured environmental factors that are not accounted for in this model. Given that sigma g for stature is not significantly different between ethnic groups, the slightly lower estimates in black children are due to the increased contribution of the environment to the phenotypic variance in this trait.  相似文献   

4.
Rhizotrons provide valuable information about plant root production, but measurements are usually made in units of root length per unit surface area of observation window surface. These measurement units are not easily comparable to above-ground plant growth. To address this deficiency, several techniques have been developed to convert rhizotron measurement units into root mass production per unit ground area. In this study, four different conversion methods were applied to the same dataset of rhizotron measurements. This data was used to reveal the effect of conversion method upon estimates of the temporal variation in, and annual magnitude of, gross root mass production. Application of four different conversion methods resulted in gross root production estimates ranging between 2.1 and 11.4 t ha−1 year−1. Temporal variation in gross root mass production also varied between methods. All current methods for quantifying root production are likely to cause some disturbance and bias. Based upon a comparison of the sources of error present in each conversion method, we assess which methods are likely to produce the most reliable estimates of root biomass production per unit ground area, and propose additional measurements which could further improve accuracy.  相似文献   

5.

Background

Repeated blocks of genome sequence have been shown to be associated with genetic diversity and disease risk in humans, and with phenotypic diversity in model organisms and domestic animals. Reliable tests are desirable to determine whether individuals are carriers of copy number variants associated with disease risk in humans and livestock, or associated with economically important traits in livestock. In some cases, copy number variants affect the phenotype through a dosage effect but in other cases, allele combinations have non-additive effects. In the latter cases, it has been difficult to develop tests because assays typically return an estimate of the sum of the copy number counts on the maternally and paternally inherited chromosome segments, and this sum does not uniquely determine the allele configuration. In this study, we show that there is an old solution to this new problem: segregation analysis, which has been used for many years to infer alleles in pedigreed populations.

Methods

Segregation analysis was used to estimate copy number alleles from assay data on simulated half-sib sheep populations. Copy number variation at the Agouti locus, known to be responsible for the recessive self-colour black phenotype, was used as a model for the simulation and an appropriate penetrance function was derived. The precision with which carriers and non-carriers of the undesirable single copy allele could be identified, was used to evaluate the method for various family sizes, assay strategies and assay accuracies.

Results

Using relationship data and segregation analysis, the probabilities of carrying the copy number alleles responsible for black or white fleece were estimated with much greater precision than by analyzing assay results for animals individually. The proportion of lambs correctly identified as non-carriers of the undesirable allele increased from 7% when the lambs were analysed alone to 80% when the lambs were analysed in half-sib families.

Conclusions

When a quantitative assay is used to estimate copy number alleles, segregation analysis of related individuals can greatly improve the precision of the estimates. Existing software for segregation analysis would require little if any change to accommodate the penetrance function for copy number assay data.  相似文献   

6.
Black‐eyed Locusta migratoria appeared in albino locusts as a result of crossing between a short‐winged strain originating from Tsushima Island, Japan, and an albino strain originating from Okinawa Island. The black eye trait was recessive to the white eye trait because the crosses between black‐ and white‐eyed albino locusts produced only individuals with white eyes in the F1 generation. In the F2 generation, black‐ and white‐eyed individuals appeared in a ratio of 1:3, indicating that the black eye trait was controlled by a simple Mendelian unit. The black eye trait showed no genetic association with other traits including wing morph, adult body dimensions and classical morphometric ratios such as hind femur length / head width and forewing length / hind femur length.  相似文献   

7.
Inheritance of extreme overweight in black families   总被引:2,自引:0,他引:2  
We used complex segregation analysis to compare the genetic transmission of overweight in randomly selected black (N = 60) and white (N = 961) families. In both groups we found evidence for polygenic transmission. Major gene inheritance was strongly supported in whites and was marginally supported in blacks. Parameter estimates for black and white families were similar, suggesting that overweight is similarly transmitted in the black and white families we observed. There was evidence in both black and white families for high gene frequency and recessive gene expression. Extreme phenotypes common in black families may be the result of interactions between major genotype and polygenic or environmental factors; alternative explanations for differences in black and white families' transmission patterns are discussed. Replication with a larger group of black families is needed to confirm our findings.  相似文献   

8.
For pastures, root turnover can have an important influence on nutrient and carbon cycling, and plant performance. Turnover was calculated from mini‐rhizotron observations for chicory (Cichorium intybus), lucerne (Medicago sativa), perennial ryegrass (Lolium perenne) and white clover (Trifolium repens) grown in the Manawatu, New Zealand. The species were combined factorially with four earthworm species treatments and a no‐earthworm control. Split plots compared the effects of not cutting and cutting the shoots at intervals. Observations were made c. 18 days apart for 2.5 years. This article concentrates on differences between plant species in root turnover in the whole soil profile to 40 cm depth. At this scale, earthworm effects were generally small and short lived. For ryegrass and white clover, root length and mass were linearly related (R2 = 0.82–0.99). For chicory and lucerne, the relationships were poorer (R2 = 0.38–0.77), so for those species length turnover may be a poor indicator of mass turnover. Standing root length, total growth and death generally decreased in the sequence ryegrass > lucerne > chicory = white clover. In length terms, scaled turnover (growth divided by average standing root length) generally followed the sequence lucerne > white clover > perennial ryegrass = chicory. Across species the scaled turnover rate averaged 3.4 per year or 0.9% per day. Cutting shoots reduced standing root length, growth and death, but increased scaled turnover. These results indicate fast and prolonged root turnover. For ryegrass and white clover, at least there is need to reappraise how to measure and model shoot : root ratios, dry matter production and carbon cycling.  相似文献   

9.
Tree roots are variable in their growth rates, alternating between periods of elongation and dormancy. This variability may have a strong influence on root anatomy. In the present study, field-grown Pinus banksiana Lamb. roots were divided into four distinct anatomical regions (i.e. white without mycorrhizae, white with mycorrhizae, condensed tannin, and cork). Changes in root growth, the proportions of the root system occupied by the various regions, and cortical plasmalemma surface area (CPSA) were determined for 6- to 9-month-old ectomycorrhizal P. banksiana seedlings during a 3-month period (August through October) in northern Ontario. The region in which the greatest change in length occurred was the condensed tannin zone, which was also the dominant contributor to root length (up to 74% of total). The roots of seedlings grown under artificial conditions had the same zones but in different proportions compared to roots in the field. A correlation was noted between increased root growth, low metacutization, and high soil water availability. The CPSA data were assumed to be a factor influencing ion uptake capacity in a positive manner. Interestingly, increases in CPSA were not directly correlated with changes in root length for field-grown seedlings. The primary contributor to CPSA in the field-grown roots was the ectomycorrhizal zone (approximately 80%). In comparison, the bulk (85%) of the CPSA in the chamber-grown roots was found in the white root region. The conditions under which the seedlings were grown strongly influenced the anatomy of their roots. Received: 27 April 1999 / Accepted: 6 December 1999  相似文献   

10.
The anatomy of the iliolumbar ligament (ILL) and the spatial orientation of the transverse process of the L5 vertebra were studied in 62 young black (n = 29) and white (n = 33) men and women during routine autopsy. The aim of the study was to determine possible racial differences in the structure and attachments of the iliolumbar ligament. The present study also investigated the spatial orientation of the transverse process of the L5 vertebra since the ILL has been reported to attach to the transverse process. The measurements of the iliolumbar ligament were carried out with a digital vernier caliper while the transverse process angles were measured with an adjustable protractor. The ligament in black people was made up of a single, markedly longer band compared to white people, where the ligament was made up of two shorter bands. The ILL measured 61.8 +/- 1.3 mm in black and 33.2 +/- 1.5 mm white men, and in black women 61.3 +/- 0.9 mm versus 32.2 +/- 1.2 mm in white women (p <0.01). Further, the ILL was markedly wider in black than white subjects (p <0.01). The horizontal and vertical angle also varied greatly between black and white subjects (p <0.01). These are previously unrecognized observations. Albeit unsubstantiated, these findings may have implications for understanding the etiology of various low back stress problems.  相似文献   

11.
 Root growth is an important component of the adaptation of rice to drought-prone environments. A hydroponic screen was used to study root growth of 28 rice varieties. Both maximum root length and adventitious root thickness varied widely between varieties. In general, japonica varieties had larger root systems than indica varieties. Two F2 populations involving the thick- and long-rooted upland japonica variety ‘Azucena’ and two poor-rooting varieties, namely the upland indica‘Bala’ and the Italian japonica‘Maratelli’, were made and screened in hydroponics. Generation means analysis revealed significant additive and dominance main effects for the root length traits with a prevalence of dominance gene effects in both crosses. The dominance×dominance type of non-allelic interactions were important for maximum root length from day 7 to day 28, root volume, root thickness and root cell length in the cross ‘Bala’בAzucena’. The heritability (broad-sense) estimates varied from low to high for the traits and displayed differences between populations. This suggested that recombinant lines with improved root traits can be developed from the two crosses with selection methods that involve some form of progeny evaluation. In a companion paper, we report the mapping of quantitative trait loci (QTLs) for root growth traits in the ‘Bala’בAzucena’ population using restriction fragment length polymorphisms (RFLPs). Received: 5 May 1996 / Accepted: 14 February 1997  相似文献   

12.
Fine root biomass and C content are critical components in ecosystem C models, but they cannot be directly determined by minirhizotron techniques, and indirect methods involve estimating 3-dimensional values (biomass/ soil volume) from 2-dimensional measurements. To estimate biomass from minirhizotron data, a conversion factor for length to biomass must be developed, and assumptions regarding depth of view must be made. In a scrub-oak ecosystem in central Florida, USA, root length density (RLD) was monitored for 10 years in a CO2 manipulation experiment using minirhizotron tubes. In the seventh year of the study, soil cores were removed from both ambient and elevated CO2 chambers. Roots from those cores were used to determine specific root length values (m/g) that were applied to the long-term RLD data for an estimation of root biomass over 10 years of CO2 manipulation. Root length and biomass estimated from minirhizotron data were comparable to determinations from soil cores, suggesting that the minirhizotron biomass model is valid. Biomass estimates from minirhizotrons indicate the <0.25 mm diameter roots accounted for nearly 95% of the total root length in 2002. The long-term trends for this smallest size class (<0.25 mm diameter) mirrored the RLD trends closely, particularly in relation to suspected root closure in this system. Elevated CO2 did not significantly affect specific root length as determined by the soil cores. A significant treatment effect indicated smallest diameter fine roots (<0.25 mm) were greater under elevated CO2 during the early years of the study and the largest (2–10 mm) had greater biomass under elevated CO2 during the later years of the study. Overall, this method permits long-term analysis of the effects of elevated CO2 on fine root biomass accumulation and provides essential information for carbon models.  相似文献   

13.
Coelho  Eugenio F.  Or  Dani 《Plant and Soil》1999,206(2):123-136
Information on root distribution and uptake patterns is useful to better understand crop responses to irrigation and fertigation, especially with the limited wetted soil volumes which develop under drip irrigation. Plant water uptake patterns play an important role in the success of drip irrigation system design and management. Here the root systems of corn were characterized by their length density (RLD) and root water uptake (RWU). Comparisons were made between the spatial patterns of corn RWU and RLD under surface and subsurface drip irrigation in a silt loam soil, considering a drip line on a crop row and between crop rows. Water uptake distribution was measured with an array of TDR probes at high spatial and temporal resolution. Root length density was measured by sampling soil cores on a grid centered on crop row. Roots were separated and an estimation of root geometrical attributes was made using two different image analysis programs. Comparisons of these programs yielded nearly identical estimates of RLD. The spatial patterns of RWU and RLD distributions, respectively normalized to the total uptake and root length, were generally similar only for drip line on a crop row, but with some local variations between the two measures. Both RLD and RWU were adequately fitted with parametric models based on semi-lognormal and normal Gaussian bivariate density functions (Coelho and Or, 1996; Soil Sci. Soc. Am. J. 60, 1039–1049).  相似文献   

14.
G蛋白偶联受体143(G-protein coupled receptor143, GPR143)在黑素体的生物合成中起重要作用,本文旨在研究GPR143基因在不同毛色绵羊皮肤组织中的差异表达及定位,探索GPR143基因与毛色形成的相关性。通过qRT-PCR方法和免疫印迹方法分别检测不同毛色绵羊皮肤组织中GPR143基因mRNA水平和蛋白水平的表达差异;运用免疫荧光法对不同毛色绵羊皮肤组织中的GPR143基因进行定位并对结果进行光密度值分析。qRT-PCR结果显示,GPR143基因在黑色绵羊皮肤组织中mRNA相对表达量为白色绵羊的7.84倍,二者差异极显著(P<0.01);免疫印迹结果显示,黑色绵羊皮肤组织中GPR143蛋白表达量是白色绵羊的1.3倍,二者差异显著(P<0.05)。免疫荧光结果显示,GPR143蛋白的主要表达部位为绵羊皮肤组织毛囊外根鞘和表皮层,经光密度值分析后发现,GPR143在黑色绵羊皮肤毛囊外根鞘和表皮层的表达量显著高于白色绵羊。本研究结果表明不同毛色绵羊皮肤组织均能表达GPR143基因,但黑色绵羊皮肤组织中该基因的mRNA和蛋白水平都显著高于白色绵羊,说明GPR143的mRNA和蛋白在黑色绵羊皮肤组织中表达上调,在白色绵羊皮肤组织中表达下调。GPR143基因可能通过调控MITF水平和黑素体的数量、大小、运动和成熟进而参与绵羊毛色的形成过程。  相似文献   

15.
What limits nitrate uptake from soil?   总被引:11,自引:4,他引:7  
Abstract. An accepted view, that unless nitrate concentrations in the soil solution are very low (e.g. below 0.1–0.2 mol m?3) the growth of high-yielding crops is not limited by the availability of nitrogen, is challenged. Conventional analyses of nutrient supply and demand, based on calculations of apparent inflow rates (uptake rates per unit total root length) are invalid. Apparent inflow rates are inversely proportional to root length. The convention of using total root length grossly overestimates the fraction of the root system active in nutrient uptake. Consequently, inflow rates based on total root lengths underestimate the true values, indicating unrealistically low nutrient concentration differentials between bulk soil and root surfaces required to drive uptake. An alternative method of analysis is suggested. This is based on total nutrient uptake rather than on inflow rate. Measurements of the former do not depend on estimates of active root length and can be made directly and reliably. The method was applied to data obtained from a pot experiment using spring wheat (Triticum aestivum L., cv. Wembley) grown in soil without nitrogen fertilizer (N0) or with nitrogen fertilizer equivalent to 200kg N ha?1 (N+). Soil nitrate concentrations calculated using the conventional method based on total root length, suggested that any increases in concentration above those measured in the N0 treatment should not have resulted in increased uptake and growth. However, the N+ plants were always bigger than those in the No treatment, refuting this suggestion. Theoretical uptakes of nitrogen (calculated initially on the basis of a fully active root system) were adjusted, by reducing the effective root length incrementally, until the theoretical uptake matched the measured net uptake of nitrogen. The mean fractions of the root systems likely to have been involved in nitrate uptake were 11% and 3.5% of the total lengths of root in the N0 and N+ treatments, respectively.  相似文献   

16.
We demonstrate a simple procedure for systematic, uniformly random sampling of a root system of known length to obtain practically unbiased estimates of the total number and dimensions of root hairs. Irrespective of the length of the root system, only 100 root hairs need to be counted to estimate the total number with sufficient precision. Numbers and dimensions of root hairs were estimated for five crested wheatgrass (Agropyron cristatum L.) root systems that had been grown for one month in a gel. Less than one hour was required to obtain estimates of root hair parameters for a single plant. There was low variability of spatial density of root hairs within a given branching order (CV < 15%); however, because of large variation in the total length of laterals, the total number of root hairs varied greatly (CV ∼70%). On average, root hairs provided half of the total surface area of a root system and a total length 20 times that of the roots. This revised version was published online in June 2006 with corrections to the Cover Date.  相似文献   

17.
Telomeres are the protective caps at the ends of eukaryotic chromosomes. Short telomere length is associated with morbidity and mortality among adults and may mark the biological impact of social experiences. Using archived dried blood spots from the Michigan Neonatal Biobank, this study examined markers of maternal social disadvantage (educational attainment, receipt of public assistance, marital status, and race/ethnicity) from linked birth certificates as predictors of telomere length at birth in a sample of 192 singleton neonates born to non-Hispanic black, non-Hispanic white, and Latina mothers aged 20–35 years. Consistent with two recent studies in newborns, but counter to the idea that maternal social disadvantage is associated with shorter offspring telomere length, we found that infants born to black mothers had longer telomeres than those born to white mothers (b = 0.12, SE = 0.06, p = .05). However, black/white differences in newborn telomere length varied by receipt of public assistance. Among newborns whose mothers received WIC and/or Medicaid, there were no significant black/white differences in telomere length (b = 0.09, SE = 0.08, p = .25). In contrast, among those whose mothers did not receive public assistance—just 6 out of 69 infants born to black mothers versus 41 out of 69 infants born to white mothers—we found that babies born to black mothers had longer telomere length than babies born to white mothers (b = 0.37, SE = 0.16, p = .03). The interaction between black race/ethnicity and receipt of public assistance did not reach the conventional threshold for statistical significance (b = ?0.22, SE = 0.15, p = .13), suggesting that this finding may be due to chance. No other markers of maternal social disadvantage were related to infant telomere length. Although replication of these results in a larger sample with more infants born to black mothers with relatively high socioeconomic status is needed, this study offers preliminary support for the hypothesis that race/ethnic differences in newborn telomere length depend on social context.  相似文献   

18.
Hatching experiments were carried out with cysts of the potato-root eelworm. The effect of solutions of potato-root excretion mixed with root excretions of six types of crucifer seedlings was studied. With cress, white mustard, and black mustard, the emergence of larvae in the mixed excretions was very much less than that from control cysts in potato-root excretion alone. On subsequent return to potato-root excretion alone, larval emergence was found to be unimpaired in the case of white and black mustards; in the case of cress, however, the total emergence differed significantly from control. Similar effects, of both types, were obtained with certain dilutions of ally isothiocyanate, the mustard oil of black mustard seed, in potato-root excretion.  相似文献   

19.
This work addressed the seasonal and successional factors of root dynamics in natural and restoration Atlantic white cedar (AWC) wetlands. Using minirhizotrons and soil root cores, fine root dynamics were measured in a chronosequence of reference and restoration AWC wetlands to compare trends in ecosystem development after canopy harvest. Seasonal fine root abundance, production, and mortality were sampled during a 439‐day period in one restoration and three reference AWC wetlands. Soil cores were collected to measure fine root biomass and to determine allometric relationships between root length and biomass. Significant seasonal variation of root dynamics was observed in the young reference and restoration sites. The mature and intermediate‐aged sites exhibited little seasonal variability in root abundance and mortality. Root production was variable but not seasonally consistent. Results suggest that root dynamics become less seasonal as AWC communities shift from herbaceous to woody vegetation dominance. No trend in fine root abundance along the chronosequence was observed, suggesting that roots rapidly reestablish following tree harvest. Measurements of annual root length production suggest increasing annual production with decreasing stand age. However, a reversal of this trend was observed when using production estimates calculated from minirhizotron measurements and root length–mass relationships. These findings underscore the importance of supplementing minirhizotron data with root allometric relationships when analyzing vegetation gradients. Overall, results indicate substantial differences in the form and quantity of root contributions to soil organic matter in the restoration site compared to that in the reference chronosequence. Higher initial planting densities of AWC are recommended to achieve similar contributions of roots to soil organic matter accumulation in the restoration site.  相似文献   

20.
棉花根系生长和空间分布特征   总被引:25,自引:0,他引:25       下载免费PDF全文
结合田间根钻取样和图像扫描分析方法, 研究了不同棉花品种根系的长度、直径和表面积动态及 0~ 10 0cm深和 0~ 4 0cm宽土壤范围内的空间分布特征。该方法与常规直尺测量结果相比相关系数R2 达到 0.899 (n =1318), 显示了较好的可靠性。研究结果表明, 棉花平均根长密度 (RLD) 在花铃期为 1.2 1~ 1.2 7mm·cm-3, 吐絮后降至 1.0 4~ 1.12mm·cm-3, 收花时为 0.76mm·cm-3 。棉花根平均直径在不同基因型间存在显著差异, 抗虫杂交棉的根直径最粗, 平均为 0.5 2mm ;早熟类型品种根直径较细, 平均为 0.36mm。在土壤深度上根直径的差异不显著, 但距棉行距离越远, 根的平均直径越小。在明确根系长度和直径动态规律的基础上, 提出了根表面积指数 (RAI) 的概念, 与地上部叶面积指数具有相似的含义和生物学意义, 且呈较好的指数相关关系 (R2 =0.779) 。RAI在生理发育时间 (PDT) 小于等于 4 0前, 其增长动态符合LOGISTIC生长规律 (R2 =0.84 9), 在PDT大于 4 0后, 呈线性递减趋势 (R2 =0.5 70~ 0.895 ), 且杂交抗虫棉的RAI在全生育期内均明显高于其它类型品种, 而早熟类型品种相对略低。RAI空间分布特征表现为, 开花前在浅根层内 (0~ 30cm) 分布最多, 花铃期以中层根系 (40~ 6 0cm) 为主, 吐絮后主要以深层 (70~ 10 0cm) 和距棉行较远的行间较多。研究结果为制定合理的施肥、灌溉措施提供了理论依据, 并量化了棉花根系的时空变化, 为进一步提高生长发育模拟模型的精度奠定了基础。  相似文献   

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