Does metazooplankton regulate the ciliate community in a shallow eutrophic lake?

1. As grazers on picoplankton and nanoplankton, planktonic ciliates form an important link in pelagic food webs. Ciliate communities may be controlled by predation by metazooplankton. In eutrophic systems, however, where the number of large crustaceans is often low, the mechanisms that regulate ciliate dynamics have rarely been described. 2. We conducted an enclosure experiment with natural and screened (145 μm) summer plankton communities to investigate the effect of the small‐sized crustacean zooplankton on ciliate community structure and the microbial loop in a shallow eutrophic lake. 3. The removal of the larger fraction of crustaceans initiated a decrease in total ciliate abundance. At the community level, we observed a substantial increase in large‐sized predacious ciliates (>100 μm) and a simultaneous decrease in the abundance of smaller ciliates (<20–40 μm) that were mostly bacterivores and bacterio‐herbivores. The compositional shift in the ciliate community, however, did not cascade down to the level of bacteria and edible phytoplankton.     

A comparison of zooplankton densities and biomass in Lakes Peipsi and Võrtsjärv (Estonia): rotifers and crustaceans versus ciliates

The abundance and biomass of ciliates, rotifers, cladocerans and copepods were studied in Lake Peipsi and Lake Võrtsjärv, both of which are shallow, turbid and large. Our hypothesis was that in a large shallow eutrophic lake, the ciliates could be the most important zooplankton group. The mean metazooplankton biomass was higher in Peipsi than in Võrtsjärv (mean values and SD, 1.8 ± 0.7 and 1.3 ± 0.6 mg WM l^?1). In Peipsi, the metazooplankton biomass was dominated by filtrators that feed on large-sized phytoplankton and are characteristic of oligo-mesotrophic waters. In Võrtsjärv, the metazooplankton was dominated by species characteristic of eutrophic waters. The planktonic ciliates in both lakes were dominated by oligotrichs. The biomass of ciliates was much greater in Võrtsjärv (mean 2.3 ± 1.4 mg WM l^?1) than in Peipsi (0.1 ± 0.08 mg WM l^?1). Ciliates formed about 60% of the total zooplankton biomass in Võrtsjärv but only 6% in Peipsi. Thus, the food chains in the two lakes differ: a grazing food chain in Peipsi and a detrital food-chain in Võrtsjärv. Consequently, top-down control of phytoplankton can be assumed to be much more important in Peipsi than in Võrtsjärv. When the detrital food chain prevails, the planktonic ciliates become the most important zooplankton group in shallow, eutrophic and large lake. Neglecting protozooplankton can result in serious underestimates of total zooplankton biomass since two-thirds of the zooplankton biomass in Võrtsjärv comprises ciliates.     

Mechanisms preventing a decrease in phytoplankton biomass after phosphorus reductions in a German drinking water reservoir—results from more than 50 years of observation

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Food Web Structure in the Recently Flooded Sep Reservoir as Inferred From Phytoplankton Population Dynamics and Living Microbial Biomass

Phytoplankton dynamics, bacterial standing stocks and living microbial biomass (derived from ATP measurements, 0.7-200 mm size class) were examined in 1996 in the newly flooded (1995) Sep Reservoir ('Massif Central,' France), for evidence of the importance of the microbial food web relative to the traditional food chain. Phosphate concentrations were low, N:P ratios were high, and phosphate losses converted into carbon accounted for <50% of phytoplankton biomass and production, indicating that P was limiting phytoplankton development during the study. The observed low availability of P contrasts with the high release of "directly" assimilable P often reported in newly flooded reservoirs, suggesting that factors determining nutrient dynamics in such ecosystems are complex. The phosphate availability, but also the water column stability, seemed to be among the major factors determining phytoplankton dynamics, as (i) large-size phytoplankton species were prominent during the period of increasing water column stability, whereas small-size species dominated phytoplankton assemblages during the period of decreasing stability, and (ii) a Dinobryon divergens bloom occurred during a period when inorganic P was undetectable, coinciding with the lowest values of bacterial standing stocks. Indication of grazing limitation of bacterial populations by the mixotrophic chrysophyte D. divergens (in late spring) and by other potential grazers (mainly rotifers in summer) seemed to be confirmed by the Model II or functional slopes of the bacterial vs phytoplankton regressions, which were always <0.63. Phytoplankton biomass was not correlated with phosphorus sources and its contribution was remarkably low relative to the living microbial biomass which, in contrast, was positively correlated with total phosphorus in summer. We conclude that planktonic microheterotrophs are strongly implicated in the phosphorus dynamics in the Sep Reservoir, and thus support the idea that an important amount of matter and energy flows through the "microbial loop" and food web, shortly after the flooding of a reservoir.     

Abundance and biomass of heterotrophic microorganisms in Lake Tanganyika

1. This study focused on heterotrophic microorganisms in the two main basins (north and south) of Lake Tanganyika during dry and wet seasons in 2002. Bacteria (81% cocci) were abundant (2.28–5.30 × 10⁶ cells mL^?1). During the dry season, in the south basin, bacterial biomass reached a maximum of 2.27 g C m^?2 and phytoplankton biomass was 3.75 g C m^?2 (integrated over a water column of 100 m). 2. Protozoan abundance was constituted of 99% of heterotrophic nanoflagellates (HNF). Communities of flagellates and bacteria consisted of very small but numerous cells. Flagellates were often the main planktonic compartment, with a biomass of 3.42–4.43 g C m^?2. Flagellate biomass was in the same range and often higher than the total autotrophic biomass (1.60–4.72 g C m^?2). 3. Total autotrophic carbon was partly sustained by the endosymbiotic zoochlorellae Strombidium. These ciliates were present only in the euphotic zone and usually contributed most of the biomass of ciliates. 4. Total heterotrophic ciliate biomass ranged between 0.35 and 0.44 g C m^?2. In 2002, heterotrophic microorganisms consisting of bacteria, flagellates and ciliates represented a large fraction of plankton. These results support the hypothesis that the microbial food web contributes to the high productivity of Lake Tanganyika. 5. As the sole source of carbon in the pelagic zone of this large lake is phytoplankton production, planktonic heterotrophs ultimately depend on autochthonous organic carbon, most probably dissolved organic carbon (DOC) from algal excretion.     

The effect of small zooplankton on the microbial loop and edible algae during a cyanobacterial bloom

SUMMARY 1. We studied the effect of the small crustacean zooplankton on heterotrophic micro-organisms and edible phytoplankton in a eutrophic lake during a cyanobacterial bloom.
2. Small (15 L) enclosures were filled with natural or screened (100 μm) lake water and incubated for 5 days in the lake. Screening removed crustacean zooplankton but the initial density of rotifers and phytoplankton remained the same in control and removal treatments. Changes in the abundance and biomass of bacteria, autotrophic picoplankton (APP), heterotrophic nanoflagellates (HNF) and ciliates were measured daily.
3. The crustacean zooplankton, dominated by the small cladoceran Chydorus sphaericus , did not affect cyanobacteria, the main phytoplankton group during the experiment.
4. The removal of the crustacean zooplankton induced a higher abundance of ciliates and reduced that of the HNF, indicating the importance of ciliates in controlling HNF in this system.     

Unimodal patterns of microbial communities with eutrophication in Mediterranean shallow lakes

The role of the microbial communities in the classical planktonic food web and its response to eutrophication in shallow lakes is still contradictory. Mediterranean shallow lakes with different eutrophication levels were sampled to study the influence of eutrophication on the microbial food web (MFW) and their contribution to the planktonic food web. Percentage of ciliate biomass in the metazooplankton (MZP) showed a U-shaped trend with eutrophication, with maximum at both ends of the chlorophyll-a (Chla) gradient. The MZP to phytoplankton ratio demonstrated a unimodal pattern with minimum values at the two ends of the Chla gradient and maximum values in the Chla range 5-10 μg l^?1. In contrast, the MFW to phytoplankton ratio reached its minimum in the central part of the Chla gradient and maximum values at the extremes of the gradient. These patterns support the hypothesis that the relative importance of bacteria and ciliates is lowest in mesotrophic shallow lakes, and highest in oligotrophic and hypereutrophic systems. These results stress the importance of protozoan in the trophic web, and indicate it is essential to include this group, especially ciliates, when quantifying zooplankton in warm shallow lakes.     

Does stocking of filter-feeding fish for production have a cascading effect on zooplankton and ecological state? A study of fourteen (sub)tropical Chinese reservoirs with contrasting nutrient concentrations

Stocking of filter-feeding fish is a common tool used in Chinese reservoirs to increase fish production because of low natural recruitment. Whether such stocking has important negative effects on zooplankton with cascading effects on phytoplankton is debated. We compared the zooplankton communities in fourteen reservoirs with different nutrient concentrations and fish densities. Both chlorophyll a (Chla) and fish catch were positively related with total phosphorus (TP), whereas zooplankton biomass did not show a similar relationship with TP. Zooplankton seemed to be influenced by fish as high fish catches coincided with a low proportion of calanoids of the total copepod biomass, a high proportion of rotifers of the total zooplankton biomass, a low zooplankton:phytoplankton biomass ratio, and the absence of Daphnia irrespective of TP concentration. Both zooplankton biomass and most of the zooplankton:phytoplankton biomass ratios were among the lowest reported in the literature for the nutrient range studied. Furthermore, the Chla:TP ratio was higher than what is typically observed in temperate lakes. We conclude that top-down control of zooplankton is of key importance in reservoirs in South China where frequent stocking of filter-feeding fish seems to contribute to poor water quality in the form of higher algal biomass and reduced clarity.     

Role of phytoplankton size distribution in lake ecosystems revealed by a comparison of whole plankton community structure between Lake Baikal and Lake Biwa

The influence of the size distribution of phytoplankton on changes in the planktonic food web structures with eutrophication was examined using natural planktonic communities in two world-famous lakes: Lake Baikal and Lake Biwa. The size distribution of phytoplankton and the ratio of heterotrophic to autotrophic biomass (H/A ratio), indicating the balance between primary production and its consumption, were investigated in the lakes of different trophic status. The results revealed that microphytoplankton (>20μm) in mesotrophic Lake Biwa, and picophytoplankton (<2μm) or nanophytoplankton (2–20μm) in oligotrophic Lake Baikal, comprised the highest proportion of the total phytoplankton biomass. The H/A ratio was lower in Lake Biwa (<1) than in Lake Baikal (>1). The low H/A ratio in Lake Biwa appeared to be the consequence of the lack of consumption of the more abundant microphytoplankton, which were inferior competitors in nutrient uptake under oligotrophic conditions but less vulnerable to grazing. As a result, unconsumed microphytoplankton accumulated in the water column, decreasing the H/A ratio in Lake Biwa. Our results showed that food web structure and energy flow in planktonic communities were greatly influenced by the size distribution of phytoplankton, in conjunction with bottom-up (nutrient uptake) and top-down (grazing) effects at the trophic level of primary producers.     

What factors control planktonic ciliates during summer in a highly eutrophic lake?

A mesocosm experiment in 24 enclosures (6 m³) started at the end of June 1996 in a highly eutrophic shallow lake, Lake Köyliönjärvi (SW Finland). The original factorial design with nutrient, fish and macrophyte treatments was lost due to strong winds causing leakages. However, after the walls were made leak-proof again on July 11, the planktonic communities developed in divergent ways. On July 31 there was a tenfold variation in total crustacean biomass among the enclosures and the lake (40.2–417.5 g C l^–1), and chlorophyll a varied from 9.5 to 67.0 g l^–1. Here, the single-day data on the 25 planktonic communities is analysed by means of correlation and factor analysis in order to identify factors controlling the protozoans, with particular emphasis on ciliates. The data set comprised: total phosphorus, nitrogen, chlorophyll, bacteria, autotrophic picoplankton, heterotrophic flagellates, abundance and species composition of ciliates, phytoplankton and metazooplankton. The results indicate that although the total ciliate abundance (ranging from 16.2 to 95.0 ind l^–1) was controlled by food resources, the observed differences in ciliate community structure could be attributed partly to differential predation by metazooplankton. The effect of Daphnia cucullata, the dominant daphnid cladoceran, was stronger than that of other metazoans.     

Trophic structure, species richness and biodiversity in Danish lakes: changes along a phosphorus gradient

1. Using data from 71, mainly shallow (an average mean depth of 3 m), Danish lakes with contrasting total phosphorus concentrations (summer mean 0.02–1.0 mg P L?l), we describe how species richness, biodiversity and trophic structure change along a total phosphorus (TP) gradient divided into five TP classes (class 1–5: <0.05, 0.05–0.1, 0.1–0.2, 0.2–0.4,> 0.4 mg P L?1).
2. With increasing TP, a significant decline was observed in the species richness of zooplankton and submerged macrophytes, while for fish, phytoplankton and floating‐leaved macrophytes, species richness was unimodally related to TP, all peaking at 0.1–0.4 mg P L?1. The Shannon–Wiener and the Hurlbert probability of inter‐specific encounter (PIE) diversity indices showed significant unimodal relationships to TP for zooplankton, phytoplankton and fish. Mean depth also contributed positively to the relationship for rotifers, phytoplankton and fish.
3. At low nutrient concentrations, piscivorous fish (particularly perch, Perca fluviatilis) were abundant and the biomass ratio of piscivores to plankti‐benthivorous cyprinids was high and the density of cyprinids low. Concurrently, the zooplankton was dominated by large‐bodied forms and the biomass ratio of zooplankton to phytoplankton and the calculated grazing pressure on phytoplankton were high. Phytoplankton biomass was low and submerged macrophyte abundance high.
4. With increasing TP, a major shift occurred in trophic structure. Catches of cyprinids in multiple mesh size gill nets increased 10‐fold from class 1 to class 5 and the weight ratio of piscivores to planktivores decreased from 0.6 in class 1 to 0.10–0.15 in classes 3–5. In addition, the mean body weight of dominant cyprinids (roach, Rutilus rutilus, and bream, Abramis brama) decreased two–threefold. Simultaneously, small cladocerans gradually became more important, and among copepods, a shift occurred from calanoid to cyclopoids. Mean body weight of cladocerans decreased from 5.1 μg in class 1 to 1.5 μg in class 5, and the biomass ratio of zooplankton to phytoplankton from 0.46 in class 1 to 0.08–0.15 in classes 3–5. Conversely, phytoplankton biomass and chlorophyll a increased 15‐fold from class 1 to 5 and submerged macrophytes disappeared from most lakes.
5. The suggestion that fish have a significant structuring role in eutrophic lakes is supported by data from three lakes in which major changes in the abundance of planktivorous fish occurred following fish kill or fish manipulation. In these lakes, studied for 8 years, a reduction in planktivores resulted in a major increase in cladoceran mean size and in the biomass ratio of zooplankton to phytoplankton, while chlorophyll a declined substantially. In comparison, no significant changes were observed in 33 ‘control’ lakes studied during the same period.     

The influence of autotrophy,heterotrophy and temperature on pelagic food web efficiency in a brackish water system

Climate change has been suggested to lead to higher temperature and increased heterotrophy in aquatic systems. The aim of this study was to test how these two factors affect metazooplankton and food web efficiency (FWE was defined as metazooplankton production divided by basal production). We tested the following hypotheses: (1) that lower metazooplankton production and lower FWE would be found in a food web based on heterotrophic production (bacteria) relative to one based on autotrophic production (phytoplankton), since the former induces a larger number of trophic levels; (2) the metazooplankton in the heterotrophic food web would contain less essential fatty acids than those from the autotrophic food web; and (3) that higher temperature would lead to increased FWE. To test these hypotheses, a mesocosm experiment was established at two different temperatures (5 and 10°C) with a dominance of either autotrophic (NP) or heterotrophic basal production (CNP). Metazooplankton production increased with temperature, but was not significantly affected by differences in basal production. However, increased heterotrophy did lead to decreased fatty acid content and lower individual weight in the zooplankton. FWE increased with autotrophy and temperature in the following order: 5CNP < 10CNP < 5NP < 10NP. Our results indicate that in the climate change scenario we considered, the temperature will have a positive effect on FWE, whereas the increase in heterotrophy will have a negative effect on FWE. Furthermore, the quality and individual weight of the metazooplankton will be reduced, with possible negative effects on higher trophic levels.     

Distribution of planktonic ciliates in highly coloured subtropical lakes: comparison with clearwater ciliate communities and the contribution of myxotrophic taxa to total autotrophic biomass

SUMMARY 1. The planktonic ciliate communities of eleven organically coloured north and central Florida lakes representing a variety of trophic conditions were examined during 1979–80. The total abundance and biomass of ciliates were not significantly different from comparable clearwater lakes and only minor taxonomic replacements were noted at the order level.
2. Timing of population peaks of oligotrophic lakes was dissimilar to clearwater lakes of the same trophic state, but seasonality in meso-trophic and eutrophic lakes resembled patterns described for comparable clearwater lakes.
3. Various ciliate components were strongly correlated with chlorophyll a concentrations, but only moderately correlated to dominant phytoplankton groups. No significant correlations were found between ciliate components and bacterial abundance.
4. Myxotrophic taxa numerically dominated oligotrophic systems, particularly during midsummer, and accounted for a large percentage of the total ciliate biomass. Estimates of the ciliate contribution to total autotrophic biomass indicate that these zoochlorellae-bearing protozoa may account for much of the autotrophic biomass during midsummer periods in coloured lakes, and thus may lead to an overestimation of phytoplankton standing crops available to zooplankton grazers if chlorophyll a is used as a surrogate measure of algal biomass.     

Population dynamics of autotrophic picoplankton in a southeastern U.S. Reservoir

Reservoirs typically exhibit a gradient along their longitudinal axis in turbidity, nutrient flux, and algal biomass. We utilized these characteristics to examine factors influencing temporal and spatial patterns in abundance, biomass, composition, and production of epilimnetic autotrophic picoplankton (APP) in Sardis Reservoir, Mississippi, USA. Over a 18-month period, APP abundance varied between about 15,000 and 700,000 cells ml⁻¹. Both APP abundance and APP biomass were closely linked to APP production and temperature. On an annual basis, the contribution of APP to total algal biomass and light-standardized production ranged between 15–47%, and 5–40%, respectively. Prokaryotes comprised more than 95% of all APP in summer, but eukaryotes dominated the APP community in winter. During the nutrient-depleted summer period, APP decreased in number but tended to increase in the percentage of total algal biomass and production, from the uplake riverine zone to the downlake lacustrine zone. Only in the second year of the study, when reservoir water residence time was more than four times greater than in the first year, were there significant differences in biomass and productivity of APP between the uplake and downlake regions. We suggest that, particularly in years or at times of the year when water-flow through the reservoir is slow, the importance of APP in Sardis Reservoir reflects a spatial and temporal gradient in nutrient availability.     

Contribution of Picocyanobacteria to total primary production and community respiratory losses in a backwater system

The contribution of autotrophic picoplankton (APP) to phytoplanktonicprimary production, investigated during the phytoplankton growingseason (March–September) in a macrophyte-dominated backwatersystem near Vienna, showed that APP mainly consisted of rod-shapedand coccoid cyanobacteria. Two stations were examined, exhibitingsimilar seasonal patterns in the development of picocyanobacteria,although the two sites differed in picocyanobacterial cell numbersand biomass by a factor of 1.5. Cell numbers determined by epifluorescencemicroscopy varied between 0.29 x 10⁴ and 34.5 x 10⁴ cells ml^–1at Station 1, and between 0.23 x 10⁴ and 19.1 x 10⁴ cells ml^–1at Station 2. At both sites, the mean cell volume of picocyanobacteriawas 0.5 µm³. Carbon fixation in the planktonic communityof the Kühwörter Wasser was dominated primarily bylarger phytoplankton, although the picoplankton community sometimessupplied up to 74% (mean: 35%) of total primary production.Distinct differences in chlorophyll a concentrations and primaryproduction between the two sites refer to a greater competitionbetween phytoplankton and macrophytes at Station 2. Communityrespiration deviated greatly in time and in level at the twostations, showing a higher dynamic in community metabolism atStation 1. At this site, community respiration losses rangedbetween 12 and 100% of gross production. Hence, community metabolismcomprised net autotrophic, balanced, and net heterotrophic situationsover the investigation period, whereas at Station 2, only netautotrophic situations could be determined.     

Relationship between bacterial and primary production in a newly filled reservoir: temporal variability over 2 consecutive years

Seasonal and spatial variations in bacterial abundance, biomass and production in a recently flooded reservoir were followed for 2 consecutive years, in conjunction with phytoplankton biomass (chlorophyll a) and activity (primary production). Between the 2 years of the study, the mean value of primary production remained constant, while those of the chlorophyll a concentration, bacterial abundance (BA), bacterial biomass (BB) and bacterial production (BP) decreased. The observed trends of the bacterial variables were linked to changes in the relative importance of allochthonous dissolved organic matter. Moreover, this factor would explain discrepancies observed between the slope of the model II regression equations established from results of the present study and those of the predictive models from the literature, relating to bacterial and phytoplankton variables. An estimate of the carbon budget indicated that 22 and 5% of the ambient primary production in the Sep Reservoir might be channeled through the microbial loop via BP during the 1st and 2nd year of the study, respectively. We conclude that heterotrophic BP in the Sep Reservoir may, on occasion, represent a significant source of carbon for higher order consumers.     

Meteorological drivers of the dynamics of autotrophic picoplankton

1. The tiny non‐motile autotrophic picoplankton (APP; size range 0.2–2 μm) occur in all types of aquatic habitats and are comprised of prokaryotic as well as eukaryotic taxa. In the Boreal Zone, the majority of lakes have high concentrations of coloured humic substances that can adversely affect lake light climate and cause steep summertime stratification resulting in epilimnetic nutrient depletion. APP are more effective in nutrient and light acquisition than larger phytoplankton and thus should be competitive in humic lakes. 2. Most lacustrine APP studies have been based on short sampling periods, and thus, interannual variation and its drivers are still unclear. We studied APP in the small, boreal, humic Lake Valkea‐Kotinen during five open‐water periods in 2002–06 to determine interannual variation and the importance of meteorological drivers for APP dynamics. 3. Total APP showed a bimodal annual pattern, but the timing and vertical location of the two maxima varied during the study. In general, APP thrived in warm water and the most important abiotic factor controlling APP was stability of the water column (N_s). On average, 82% of APP were found in the epilimnion or metalimnion during summertime stratification. 4. There was niche separation of APP and larger phytoplankton in the lake because, with only one exception, APP maxima occurred separately from the maxima of larger phytoplankton. 5. Two groups, solitary eukaryotic APP and colonial picocyanobacteria (Merismopedia warmingiana), responded differently to the abiotic factors. Solitary APP preferred high water colour and low pH, both of which occurred after heavy rain, whereas colonial APP did not fare well when water colour was high. Our findings suggest that when future climate change‐related processes increase incoming allocthonous organic matter load from the catchment, solitary eukaryotic APP will be favoured.     

Annual Changes of Abundance and Biomass of Planktonic Ciliates in the Gdańsk Basin,Southern Baltic

Seasonal changes in the species composition, abundance and biomass of planktonic ciliates were determined every 2–3 weeks at two sites of 30 m depth and one location of 105 m depth in the southwestern Gdańsk Basin between January 1987 and January 1988. A total of 40 ciliate taxa were observed during this period. Autotrophic Mesodinium rubrum dominated ciliate abundance and biomass: maximal values of 50 · 10⁻¹ ind. ^1-1 and 65 μg C 1⁻¹ were recorded. The annual mean biomass of M. rubrum comprised 6 to 9% of the annual mean phytoplankton biomass. The highest abundances and biomasses of heterotrophic ciliates were noted at all stations in the spring and summer in the euphotic zone with maximum values of 28 · 10³ ind. 1⁻¹ and 23 μg C 1⁻¹. Three ciliates assemblages were distinguished in the epipelagic layer: large and medium-size non-predatory ciliates, achieving peak abundance in spring and autumn; small-size microphagous ciliates and epibiotic ciliates which were abundant in summer, and large-size predacious ciliates dominating in spring. Below 60 m, a separate deep-water ciliate community composed of Prorodon-like ciliates and Metacystis spp. was found. The ciliate biomass in the 60–105 m layer was similar to the ciliate biomass in the euphotic zone. The heterotrophic ciliate community contributed 10 to 13% to the annual mean zooplankton biomass. The potential annual production of M. rubrum comprised 6 to 9% of the total primary production. Carbon demand of non-predatory ciliates, calculated on the basis of their potential production, was estimated to be equivalent to 12–15% of the gross primary production.     

Production of lower-trophic organisms during incubation of unaltered deep-sea water

Incubation of unaltered deep-sea water and grazing experiment of nano- and micro- protozooplankton during incubation of deep-sea water were carried out to quantitatively characterize the planktonic structures of lower-trophic organisms and clarify the trophic pathways and controlling mechanisms involved. Phytoplankton biomass increased to 637 mg as carbon weight in a 500-l tank on Day 7 and was dominant in the planktonic structure of lower-trophic organisms. Nitrates in the incubation water was depleted after Day 7 and phytoplankton biomass decreased rapidly. On the other hand, bacteria, heterotrophic nano-flagellates and ciliates increased toward the end of incubation and were dominant in the later days of incubation. In grazing experiments on microbial organisms, bacterivory is more important for the carbon pathway in microbial food webs than herbivory when phytoplankton biomass is less than that of bacteria (low P/B conditions), while herbivory is more important than bacterivory when phytoplankton biomass is more than that of bacteria (high P/B conditions). Deep-sea water exhibited high phytoplankton productivity due to inherent high nutrients values. After depletion of nutrients, phytoplankton decreased (due also to enhanced nano- and micro-zooplankton grazing) and microbial organisms dominated. Thus, nutrients in the incubation water control the planktonic structure of lower-trophic organisms.     

Structure and functioning of the microbial loop in a boreal reservoir

The abundance and biomass of the main components of the microbial plankton food web (“microbial loop”)—heterotrophic bacteria, phototrophic picoplankton and nanoplankton, heterotrophic nanoflagellates, ciliates and viruses, production of phytoplankton and bacterioplankton, bacterivory of nanoflagellates, bacterial lysis by viruses, and the species composition of protists—have been determined in summer time in the Sheksna Reservoir (the Upper Volga basin). A total of 34 species of heterotrophic nanoflagellates from 15 taxa and 15 species of ciliates from 4 classes are identified. In different parts of the reservoir, the biomass of the microbial community varies from 26.2 to 64.3% (on average 45.5%) of the total plankton biomass. Heterotrophic bacteria are the main component of the microbial community, averaging 63.9% of the total microbial biomass. They are the second (after the phytoplankton) component of the plankton and contribute on average 28.6% to the plankton biomass. The high ratio of the production of heterotrophic bacteria to the production of phytoplankton indicates the important role of bacteria, which transfer carbon of allochthonous dissolved organic substances to a food web of the reservoir.