The Structure of “N1, N6-Carbonyladenosine”

Abstract

Re-interpretation of the available data led to structural assignment of the title N¹, N⁶carbonyladenosine (1b) as N⁶,N⁶-carbonyldiadenosine (4b).     

Bromine-Induced Selective N-Monodemethylation of N6, N6-Dimethyl-2′,3′-O-isopropylideneadenosine

Abstract

Bromination of the title compound 1 with bromine in phosphate buffer has led to 8-bromo-N⁶, N⁶-dimethyl-2′,3′-0-isopropylidene-adenosine (2) and 2′,3′-0-isopropylidene-N⁶-methyladenosine (3). Under similar conditions, compound 2 gave 8-bromo-2′,3′-0-isopropylidene-N⁶-methyladenosine (4). The transformations 1 → 3 and 2 → 4 represent biomimetic models of in vivo N⁶-demethylation of antibiotic puromycin.     

Antimicrobial efficacy of some N,N’-Dialkyl-N,N’-dimethyl-1, 6-hexanediamine dioxides

A total of 17 N,N'-dialkyl-N,N'-dimethyl-1,6-hexanediamine dioxides were tested for activity against three microorganisms. A relationship was found between the length of the alkyl substituent and antimicrobial activity.     

The increase in activity of glucose-6-phosphate dehydrogenase and 6-phosphogluconate dehydrogenase in skeletal muscles of rats after subcutaneous administration of N,N′-dimethyl-para-phenylenediamine

Summary After subcutaneous administration of N,N-dimethyl-para-phenylenediamine (DPPD) in rats, a myogenic myopathy was produced in the skeletal muscles. In this communication, the results of the application of various histochemical techniques for the localization of oxidoreductases, transferases, hydrolases and isomerases and biochemical techniques for the estimation of activities of oxidoreductases in the experimental skeletal muscles are presented. The most striking result was the activity of glucose-6-phosphate dehydrogenase and 6-phosphogluconate dehydrogenase which increased dramatically during the early phase of the muscle disease. The increase in activity of the pentose phosphate shunt enzymes was the first pathological alteration and was present as early as 8 h after a single injection of DPPD. Histochemical techniques for demonstration of activity of both enzymes are therefore highly suited for the detection of minor diseases and the early onset of major diseases of the neuromuscular system. Some glycolytic enzymes as well as some enzymes of the aerobic part of the metabolism showed an early decrease or increase in activity indicating a metabolic imbalance in the muscle fibres. There were more fibres with an intermediate pattern of the energy yielding enzymes in the experimental muscle specimens then in specimens from the control groups. The activity of the catabolic hydrolytic enzymes was strongly increased in pathological muscles. The aerobic muscles were more vulnerable to DPPD than the anaerobic muscles.     

Synthesis of aminoacylated N6,N6-dimethyladenosine solid support for efficient access to hydrolysis-resistant 3′-charged tRNA mimics

RNA-amino acid and RNA-peptide conjugates that mimic charged tRNA 3′-ends are valuable substrates for structural and functional investigations of ribosomal complexes. To obtain such conjugates, most synthetic approaches that are found in the literature make use of puromycin. This well available aminonucleoside antibiotic contains a dimethylamino group at the nucleobase and a methylated tyrosine that is connected via an amide linkage to the ribose moiety. To increase structural diversity, we present the synthesis of a N⁶,N⁶-dimethylated 3′-azido-3′-deoxyadenosine precursor that can be coupled to any amino acid. Further derivatization results in the solid support that is eligible for the preparation of stable 3′-aminoacyl- or 3′-peptidyl-tRNA termini with an amide instead of the natural ester linkage. The present work expands our previously established route that delivered a broad range of peptidyl-tRNA mimics to the corresponding counterparts with N⁶,N⁶-dimethylation pattern of the terminal adenosine (A76). This aspect is of significance to modulate the binding preferences of the mimics for ribosomal A- versus P-site.     

Comparison of cytokinin activities of the base,ribonucleoside and 5′- and cyclic-3′,5′-monophosphate ribonucleotides of N6-isopentenyl-, N6-benzyl or 8-bromo-adenine

The cytokinin activities of adenosine 3′,5′-monophosphate, N⁶,O^2″-dibutyryladenosine 3′,5−'monophosphate, 8-bromoadenosine 3′,5′-monophosphate, N⁶-(Δ²-isopentenyl)adenosine 3′,5′-monophosphate, and N⁶-benzyladenosine 3′,5′-monophosphate were determined in the tobacco bioassay and compared with the activities of the corresponding non-cyclic nucleotides, nucleosides and bases of the N⁶-isopentenyl-substituted, N⁶-benzyl-substituted, 8-bromo-substituted, and unsubstituted adenine series. In each of these series the cytokinin activities in decreasing order were: bases ⪢ nucleosides ⪖ nucleotides > cyclic nucleotides. All members of the N⁶-isopentenyl- substituted and N⁶-benzyl-substituted series were highly active cytokinins, reaching maximum activity at concentrations of 1 μM or less, whereas, as expected, all members of the unmodified adenine series were inactive in the tested concentration ranges of up to 180 and 200 μM for adenosine and adenine, and 40 μM for the adenine nucleotides. Members of the 8-bromo-substituted adenine series were much weaker cytokinins than the N⁶-substituted adenine derivatives but showed activity in the same sequence starting at a concentration of about 5 μM. Thus, in the cases of 8-bromoadenosine 3′,5′-monophosphate and N⁶,O^2′-dibutyryl-adenosine 3′,5′-monophosphate, both of which have been reported to promote cell division and growth of plant tissues, the cytokinin activity is related to the 8-bromo substituent and to the N⁶-butyryl substituent, respectively, rather than to the 3′,5′-cyclic monophosphate moiety.     

Effect of stereospecific hydroxylation of N6-(Δ 2-Isopentenyl)adenosine on cytokinin activity

The cytokinin activities of cis and trans ribosylzeatin isomers and that of N⁶-(²-isopentenyl)adenosine were compared in four bioassays. The trans isomer was found to be more active than the cis isomer in stimulation of cucumber cotyledon expansion (100x), retention of chlorophyll in detached leaf pieces (7x), induction and stimulation of chlorophyll synthesis in cucumber cotyledons (20x) and of betacyanin synthesis in Amaranthus caudatus seedlings grown in the dark (60x). The N⁶-(²-isopentenyl)adenosine adenosine was less active than the trans ribosylzeatin in all four bioassays and more active than the cis ribosylzeatin in induction and stimulation of betacyanin and chlorophyll synthesis. These results show that the hydroxylation of the trans methyl group in the N⁶ side chain of N⁶-(²-isopentenyl)adenosine increases the biological activity and that this activity is either decreased or not significantly changed when the cis methyl group is hydroxylated.Abbreviations i⁶Ado N⁶-(²-isopentenyl)adenosine or 6-(3-methyl-2-butenylamino)-9--D-ribofuranosylpurine - t-to⁶Ado trans-ribosylzeatin or 6-(4-hydroxy-3-methyl-trans-2-butenylamino)-9--D-ribofuranosylpurine - c-io⁶Ado cis-ribosylzeatin or 6-(4-hydroxy-3-methyl-cis-2-butenylamino)-9--D-ribofuranosylpurine - HPLC high pressure liquid chromatography     

Mode of action of N,N′-diphenylurea: The isolation and identification of the cytokinins in the transfer RNA from tobacco callus grown in the presence of N,N′-diphenylurea

Summary The tRNA from cytokinin-dependent tobacco callus (Nicotiana tabacum) grown on mineral medium containing N,N-diphenylurea as the source of cytokinin was found to contain 3 cytokinin-active ribonucleosides. The 2 ribonucleosides present in the largest amounts were identified conclusively by their chromatographic properties, ultra-violet and low-resolution mass spectra as the naturally-occurring cytokinins 6-(4-hydroxy-3-methyl-cis-2-butenylamino)-9--D-ribofuranosylpurine and 6-(3-methyl-2-butenylamino)-9--ribofuranosylpurine. A third ribonucleoside, present in smaller amounts, was identified as another naturally-occurring cytokinin 6-(4-hydroxy-3-methyl-2-butenylamino)-2-methylthio-9--D-ribofuranosylpurine on the basis of its chromatographic behaviour. No evidence was found to associate the mode of action of the non-purine cytokinin, N,N-diphenylurea, with tRNA.Abbreviation DPU N,N-diphenylurea     

Phagocidal Activity of the Hydrolyzate of Acetal Derivatives of Oxidized Spermine and Its N,N′-Dimethyl Analog

The hydrolysis of acetal derivatives of oxidized spermine, N, N′-bis (3, 3-diethoxypropyl)-1, 4-diaminobutane, and its N, N′-dimethyl analog with acid was practically complete within 1 hr. During the hydrolysis of these compounds, no detectable amounts of acrolein were formed in the reaction mixture. While the hydrolyzate of the acetal derivative of oxidized spermine potently inactivated bacteriophage T¹, that of the N, N′-dimethyl analog had little phagocidal activity.     

Synthesis of hydroxydiamines and triamines via reductive cleavage of N–N bond in substituted pyrazolidines

Aliphatic polyamines, being a versatile class of organic compounds, are widely used in many fields of medicine and organic chemistry. However, the general approach to the synthesis of chiral aliphatic polyamines has been still undeveloped. Here, we describe a new method for the synthesis of chiral trifunctional amino compounds, namely hydroxydiamines and triamines. The initial compounds, namely substituted hydroxy- or aminopyrazolidines and pyrazolines, are readily available using convenient stereoselective methods developed earlier by us. The proposed method allows synthesizing of chiral diaminoalcohols and triamines, which are the analogs of a well-known anti-TB drug, namely ethambutol, and cannot be obtained alternatively. The key step of the synthesis is N-N bond cleavage in substituted hydroxy- or aminopyrazolidines and pyrazolines with borane-tetrahydrofuran complex; other known methods for N-N bond cleavage turned out to be ineffective. The main advantage of the proposed method is the retention of a certain configuration of stereocenters in the course of the reaction. Six new chiral diasteomerically pure substituted hydroxydiamines and triamines and the enantiomerically pure triamine with four chiral centers were synthesized and characterized using NMR, IR and mass spectroscopy, as well as elemental analysis.     

1株H6N6亚型禽流感病毒分子遗传特性分析

本研究采用无特定病原体(specific pathogen free,SPF)鸡胚,从某活禽市场环境中分离出1株H6N6亚型禽流感病毒(A/environment/Zhenjiang/zj18/2013,en/zj18)。通过二代测序技术进行全基因组测序,通过BLASTn 进行同源性检索,并采用MEGA5.0软件构建系统发生树。基因进化树分析表明,分离株en/zj18的所有8个基因节段(PB2、PB1、PA、HA、NP、NA、M和NS)均与近年来中国华东地区流行的H6N6亚型禽流感病毒的相应基因位于同一进化分支,与参考株的核苷酸同源性达96.7%～99.6%。分离株en/zj18的HA蛋白裂解位点为PQIETR↓GL,是低致病性禽流感病毒的分子特征。HA蛋白上关键受体结合位点190和228位(按H3亚型的HA蛋白序列排序)氨基酸分别是E和G,理论上更易与α2,3-半乳糖苷唾液酸受体结合。结果提示,需加强活禽市场禽流感病毒的持续监测,从而为有效应对禽流感病毒对公共卫生的持续威胁提供科学依据。     

Chemistry of the N′-Oxides of Nicotine and Myosmine

Nicotine-N′-oxide (II) was purified to give a crystalline form which has m.p. 170~171°C, and . The reaction of nicotine-N′-oxide with acetic anhydride afforded a good yield of 1′-(3-pyridyl)-4′-(N′-acetylmethylamino)-l′-propanone (V) which was hydrolyzed to give pseudoöxynicotine (III). Nicotine-N′-oxide (II) either with acetyl chloride or with benzoyl chloride, under similar conditions, furnished pseudoöxynicotine (III) without giving the corresponding acyl compound as an intermediate. 2′-Methyl-6′-(3-pyridyl)-tetrahydro-l′,2′-oxazine (XII) rearranged from nicotine-N′-oxide reacted neither with acetic anhydride nor acetyl chloride. Reduction of the oxime (IV) of pseudoöxynicotine dihydrochloride gave dl-l′-amino-l′-(3-pyridyl)-4′-methyl-aminobutane (VII) as a main product. The hydrazone (VIII) of pseudoöxynicotine dihydrochloride subjected to a modification of the Wolf-Kischner reaction, was reduced to yield dihydrometanicotine (IX). The pyrolysis of N′-methylmyosmine (IV) gave N′-methylnicotinamide (XI) and nicotyrine (X) in low yields. The presence of N′-methylmyosmine in the autoxidation mixture of nicotine was also established. Oxidation of nornicotine (XIV) with hydrogen peroxide furnished myosmine-N′-oxide (XV) whose identity was established by its chemical and physical properties. This oxide, on pyrolysis, gave nornicotyrine (XVII) and myosmine (XVI).     

Cytokinin-like activity of N′-substituted N-phenylureas

We have synthesized 14 N-phenylurea derivatives, differing in theheterocyclic portion linked in N-position, and tested theircytokinin-like activity. Three different bioassays were used: the chlorophylllevel determination test, the bioassay for the expression of hormone-inducedchimeric Pg5-GUS gene and the tomato regeneration test, in which1,2-benzisoxazole-3-acetic acid (BOAA) was utilized as auxin. Thecytokinin-likeactivity showed by three of these compounds in the regeneration assay seems tobe related to their different heterocyclic nature. Results obtained indicatethat the N-phenyl-N-1,3,4-thiadiazol-2-ylurea (compound 4), an isomer ofN-phenyl-N-1,2,3-thiadiazol-5-ylurea (thidiazuron, TDZ), in the absenceof auxin induces shoot regeneration in the 34,2% of the explantscultured; theN-phenyl-N-(3-chloro-1,2-benzisothiazol-7-yl) urea (compound 10),structurally different from TDZ, in the absence of auxin induces shootregeneration in the 25,9% of explants, significantly lower than that ofTDZ (68,8%). N-phenyl-N-benzothiazol-6-ylurea (compound 13),structurally different from TDZ, in the absence of auxin induces the99,5% of shoot regeneration, significantly different from that of theother substances. The addition of auxin in the cotyledon regeneration assayreduces the differences. The compound 13 could be considered a new phenylureaderivative with a highly specific cytokinin-like activity.     

广西鸭源H6N6亚型禽流感病毒NA的序列分析

2009年至2014年间我单位在广西南宁、防城港和梧州三市活禽交易市场进行流行病学调查时,在鸭咽喉和泄殖腔中分离到10株H6亚型禽流感病毒(AIV)毒株。为了解这10株病毒的神经氨酸酶基因(NA)的分子特征和差异,我们运用RT-PCR对这10株H6亚型禽流感病毒的NA基因进行了扩增、序列测定及分析。结果显示,所分离的10株病毒均为H6N6亚型流感病毒。序列同源性分析结果表明A/DK/NN/6121/2013株的NA基因与其他9株NA基因差异性较大,差异性达到5.4%~5.9%,其余9株之间相似性在97.9%~100%;南宁与防城港、南宁与梧州以及梧州与防城港毒株相似性分别为94.5%~100%、94.1%~98.1%和97.8%~98.5%,这些数据表明不同毒株呈现一定的地域性差异。氨基酸序列分析发现10个毒株NA基因上潜在的糖基化位点也有所不同,表明这些毒株有异源性。遗传进化分析表明10株NA基因片段均属于欧亚谱系的禽源演化分支,除了南宁市的DK/NN/6121与福建相应毒株遗传进化关系较近外,其他9株与越南的相应毒株相互之间遗传进化关系都很亲近,且与越南A/duck/Vietnam/LBM235/2012(H3N6)株的NA基因存在很近的遗传关系,推测它们之间的基因可能存在基因交流;同时发现与台湾和韩国等的毒株关联不大。     

Novel Types of N6,2′-Cyclonucleosides

Abstract

Upon oxidation followed by treatment with hydroxylamine, the 3′,5′-diblocked uridine 1 gave the expected oxime 2 together with the N⁶,2′.cyclonucleoside 3 formed by nucleophilic attack of hydroxylamine at both C-6 and C-2′ positions. Reduction of 2 took place predominantly from the α face and the major D-arabino compound obtained gave the cyclonucleosides, 7 via Michael type addition. The structures of the novel cyclonucleosides, particularly their configuration at C-6 were established by X-ray diffraction.     

N,N,N′,N′-tetramethyl-p-phenylenediamine initiates the appearance of a well-resolved I peak in the kinetics of chlorophyll fluorescence rise in isolated thylakoids

Addition of N,N,N′,N′-tetramethyl-p-phenylendiamine (TMPD) to thylakoid membranes isolated from pea leaves initiates the appearance of peak I in the polyphasic rise of chlorophyll (Chl) fluorescence observed during strong illumination, making it similar to that observed in leaves or intact chloroplasts. This effect depends on TMPD concentration and incubation period of isolated thylakoids with TMPD. The resolution of I-peak in the presence of weak concentrations of TMPD which reduced the overlap between I- and P-peaks, resulted from a decreased reduction of both fast and slow plastoquinone (PQ) pools of the granal and stromal thylakoids, respectively, as TMPD effectively accepts electrons from reduced PQ. High concentrations of TMPD markedly decreased the J–I–P phase of fluorescence rise and greatly retarded the I–P step rise. Accumulation of oxidized TMPD in the thylakoid lumen accelerated the re-oxidation of the acceptor side of Photosystem II (PSII) as illustrated by a two-fold increase in the magnitude of the fast component and complete suppression of the middle component of the variable Chl fluorescence (F_v) decay in the dark. Evidently, exogenous addition of high concentrations of TMPD prevented the light-induced reduction of the slow PQ pool.     

The control of growth of mouse mastocytoma Cells by N6,O2′-dibutyryladenosine cyclic 3′,5′-monophosphate

Summary Addition of N⁶,O^2′-Dibutyryladenosine cyclic 3′,5′ monophosphate (DB cyclic AMP) plus theophylline or transfer to medium containing 0.2% serum slowed the growth of cultured mouse mastocytoma cells and eventually arrested their growth in G1 phase. Examination of the properties of cells arrested by either procedure suggested that the drugs arrested cells in G1 phase 1.5–2 h after the point of low serum arrest. Cycloheximide prevented the recovery of cell growth after low serum or drug-induced arrest demonstrating that protein synthesis was necessary to pass either growth restriction point. Cordycepin also prevented drug-arrested cells from progressing into cycle indicating a requirement for RNA synthesis to overcome the drug-induced growth arrest. Evidence is also presented that DB cyclic AMP prevented the cells receiving a pulse of calcium necessary to proceed past the DB cyclic AMP-sensitive growth restriction point. It is suggested that high cyclic AMP levels prevent mastocytoma cells from receiving a surge of calcium in G1 phase that is necessary if the cells are to proceed to S phase and eventually divide.     

Concerning the presence of the cytokinin,N 6-(Δ2-isopentnyl) adenine,in cultures of Corynebacterium fascians

Summary Corynebacterium fascians causes a fasciation disease in a number of dicotyledons and this disease appears to be caused by compounds with cytokinin activity elaborated by the infecting bacteria. Extractions of C. fascians in late logarithmic phase under conditions where the pH never falls below 7.0 yield about 2 g/l of N ⁶-(², a potent cytokinin. If a mild acidification step is included in the extraction procedure the yield increases to about 12 g/l. This is due to release of N ⁶-(²-isopentenyl)adenine from C. fascians tRNA during the extraction procedure. In terms of total cytokinin activity present in C. fascians cultures, N ⁶-(²-isopentenyl)adenine appears to be a minor component.     

N6-甲基腺嘌呤修饰与环状RNA

N6-甲基腺嘌呤(N6-methyladenosine,m6A)是发生在腺嘌呤第6位氮原子上的甲基化修饰,广泛存在于多种真核生物的RNA中。环状RNA(circular RNA,circRNA)是一类表达稳定的非编码RNA。该文分别从m6A影响circRNA的形成和翻译、降解、出核、先天免疫,通过下游分子影响circRNA的方面,以及circRNA竞争性结合三种m6A相关酶影响其他RNA的m6A修饰,海绵吸附微小RNA(microRNA,miRNA)靶向m6A相关酶,调控甲基转移酶的表达,结合去甲基化酶的mRNA促进其表达,增强去甲基化酶与mRNA的相互作用,结合并参与泛素化降解m6A结合蛋白的方面,及其他间接联系方面总结归纳了二者之间的作用机制,以期为研究m6A与circRNA相互影响的机制提供参考。