Occurrence and distribution of arbuscular mycorrhizal fungal species in three types of grassland community of the Tibetan Plateau

Arbuscular mycorrhizal (AM) fungal spore communities and distribution patterns were surveyed in montane scrub grassland, alpine steppe, and alpine meadow sites at altitudes ranging from 3,500 to 5,200 m a.s.l. on the Tibetan Plateau. Thirty-two representative soil samples were collected from the root zone of the dominant and common plant species in late May 2004. Twenty-three AM fungal species representing six genera (Acaulospora, Entrophospora, Glomus, Pacispora, Paraglomus, and Scutellospora) were detected and species richness varied from 5.3 ± 0.8 to 10.5 ± 2.5 per site. Some AM fungal species were restricted to one vegetation type and Glomus mosseae, Glomus intraradices, and Scutellospora calospora were detected in all three vegetation types. Glomus species were found to be the most frequent and abundant in all three vegetation types. Acaulospora occurred mostly in the alpine steppe and alpine meadow. Scutellospora occurred mostly in montane scrub grassland. At the species level, Glomus mosseae was dominant in the montane scrub, Acaulospora laevis and Pacispora scintillans were dominant in the alpine steppe, and Acaulospora laevis, Pacispora scintillans, and Glomus claroideum dominated the alpine meadow. It was evident from the distribution pattern of AM fungi in the different vegetation types that the abundance and diversity of AM fungal species were lowest in the montane scrub grassland than the other two plant communities. Climatic conditions, especially temperatures, and intensity of land use may be the most important factors influencing the AM fungal community.     

A preliminary survey of the arbuscular mycorrhizal status of grassland plants in southern Tibet

We report for the first time the arbuscular mycorrhizal (AM) status of native plant species and AM fungal diversity in the grasslands of southern Tibet. A total of 51 soil samples were collected from the rhizospheres of the dominant plant species, and AM fungal structures were observed in 18 (82%) of 22 plant species examined. Vesicles and aseptate hyphae were the structures most frequently observed in the plant roots. After trap culture for 5 months, 25 AM fungal taxa were identified in the soil samples collected, of which nine belonged to Glomus, ten to Acaulospora, one to Entrophospora and five to Scutellospora. The frequency of occurrence of different genera and species varied greatly. Glomus was the dominant genus, and the most frequent and abundant species was Glomus mosseae. Over the whole sampling area, spore density in the rhizosphere soil of different host plant species ranged from 2 to 66 per 20 g air-dried soil. Overall AM fungal species richness was 2.10 and species diversity was 2.35. AM fungal diversity was also compared among the four different land use types (farmland and normal, disturbed and highly disturbed montane scrub grassland). Spore densities in the farmland and normal grassland were much higher than in the grasslands that had been degraded to varying degrees. The species richness in normal grassland was the highest of the four land use types examined. Species diversity varied from 1.99 to 0.94 and was highest in normal grassland, intermediate in degraded grassland and farmland, and lowest in the highly disturbed grassland.     

Arbuscular mycorrhizal status of spring ephemerals in the desert ecosystem of Junggar Basin, China

A survey was made of the arbuscular mycorrhizal (AM) status of 73 spring ephemeral plant species that grow in the desert ecosystem of Junggar Basin, northwest China. The proportion of AM colonization ranged from 7 to 73% with a mean value of 30%. A total of 65 plant species studied were AM with coils/arbuscules or vesicles and the remaining eight species were possibly AM with no coils/arbuscules or vesicles but with fungal mycelia in the root cortex. AM fungal spores were isolated from rhizosphere samples of all 73 plant species and identified. The mean spore density was 22 per 20 ml of air-dried soil, ranging from 0 to 120. Colonization and spore density of perennials were slightly higher than of annuals and varied among different plant families. A total of 603 AM fungal spore (or sporocarp) specimens were isolated belonging to six genera, Acaulospora, Archaeopora, Entrophospora, Glomus, Paraglomus, and Scutellospora; Glomus was the dominant genus. We conclude that spring ephemerals may be highly dependent on AM associations for survival in the very infertile and arid soils of this desert ecosystem.Electronic supplementary material Supplementary material is available for this article at     

长期围封对不同放牧强度下草地植物和AM真菌群落恢复的影响

为探明人为干扰对草地生态系统生态恢复的影响,以不同放牧强度试验草地为研究对象,调查了围封14a后草地植物群落的多样性,并应用第二代高通量测序技术454测序法分析了植物根际土壤中AM真菌的群落结构。研究结果显示,14a围封保育使得不同放牧强度小区与长期封育小区植被盖度及植物多样性指数基本恢复至同一水平。土壤速效磷含量在重度放牧小区最低(1.00 mg/kg),轻度放牧区最高(2.25 mg/kg),其它土壤理化性质指标在不同小区之间没有显著差异。通过分子鉴定发现所有土壤样品中AM真菌共有87个分类单元(VT),隶属于Diversispora、Otospora、Scutellospora、Glomeraceae Glomus、Rhizophagus、Paraglomus和Archaeospora等7个属。对不同放牧强度小区AM真菌进行多样性分析,结果表明长期封育小区AM真菌Shannon多样性指数和Pielou均匀度指数最低,且显著低于中度放牧区,而AM真菌多样性在各放牧小区之间差异不显著。本研究表明长期围封可以有效促进退化草地植物群落的恢复,而AM真菌表现出与植物群落恢复的不同步性。对于草地生态系统退化及恢复过程中植物和土壤功能微生物类群的协同关系还需要进一步系统深入的研究。     

不同生境下川麦冬根围土壤丛枝菌根真菌多样性北大核心CSCD

采用高通量(Illumina Miseq)测序技术对栽培和野生2种生境下川麦冬根围的丛枝菌根(AM)真菌多样性和群落结构进行测定,并结合土壤理化因子进行相关性分析,以明确两种生境下川麦冬根围土壤AM真菌多样性和优势群落的分布特点,探讨AM真菌群落分布差异的驱动因子,为AM真菌应用于麦冬生产提供理论依据和技术支持。结果表明:(1)不同生境下川麦冬根围土壤中共鉴定出AM真菌3属10种,其中野生川麦冬根围土壤鉴定出的AM真菌3属7种,分别隶属于无梗囊霉属(Acaulospora)、多孢囊霉属(Diversispora)和球囊霉属(Glomus),而栽培环境下鉴定出AM真菌1属6种,隶属于球囊霉属。2个生境优势属均为球囊霉属。(2)不同生境下川麦冬根围AM真菌之间存在显著差异,野生生境下川麦冬根围土壤AM真菌多样性指数ACE和Shannon均显著高于人工栽培生境,而Simpson指数则相反。(3)相关性分析表明,AM真菌多样性指数及群落组成结构均与土壤理化因子存在相关性,其中全钾(TK)、全磷(TP)、全氮(TN)对AM真菌多样性指数和群落结构组成均存在显著影响。研究认为,不同生境下川麦冬根围AM真菌群落存在显著差异,球囊霉属为川麦冬互利共生的关键属,TK、TP、TN是不同生境川麦冬根围AM真菌群落差异的主要驱动因子。     

Communities of arbuscular mycorrhizal fungi in grassland: Seasonal variability and effects of environment and host plants

The seasonal dynamics of a community of endomycorrhizal fungal morphotypes in the roots of three grassland species (Achillea millefolium, Poa angustifolia, Plantago lanceolata) was evaluated, together with the effects of experimental treatment (mowing and phosphorus application) and the host plant properties. Strong seasonal variability was found in the fungal community, where clear seasonal patterns can be distinguished for several fungal morphotypes. The sampling date explained 20 to 30% of the total compositional variability for all three host species. ThePlantago roots host the highest number of arbuscular mycorrhizal (AM) fungal populations. There are two co-dominant fungal morphotypes inAchillea roots (assigned to the generaScutellospora andGlomus) and only one strongly dominant morphotype (assigned toGlomus), in thePoa roots. All three host species have a comparable pattern of richness of AM morphotypes with a single peak in the summer, possibly aligned with the flowering time of the host.     

Arbuscular mycorrhizal fungi associated with sedges on the Tibetan plateau

The arbuscular mycorrhizal (AM) status of nine dominant sedge species and the diversity of AM fungi in Tibetan grassland were surveyed in the autumn of 2003 and 2004. Most of the sedge species and ecotypes examined were mycorrhizal, but Carex moorcroftii and Kobresia pusilla were of doubtful AM status, and Kobresia humilis was facultatively mycorrhizal. This is the first report of the mycorrhizal status of eight of the nine sedge species examined. Intraradical vesicles and aseptate hyphae were the structures most frequently observed. Appressoria, coils, and arbuscules were found in the roots of a few sedge species. A strong negative correlation was found between soil organic matter content and the extent of mycorrhizal colonization. Using trap cultures, 26 species of AM fungi belonging to six genera, Glomus, Acaulospora, Paraglomus, Archaeospora, Pacispora, and Scutellospora, were isolated from the soil samples collected. The frequency of occurrence of different taxa of AM fungi varied greatly. Glomus and Acaulospora were the dominant genera, and Acaulospora scrobiculata was the most frequent and abundant species. The species richness of AM fungi was 2.73 in the study area. Species richness and diversity index differed among the sedge species but were not correlated with soil factors such as pH, available P, or organic matter content.     

Arbuscular mycorrhizal and dark septate endophyte fungal associations in South Indian grasses

We examined arbuscular mycorrhizal (AM) and dark septate endophyte (DSE) fungal association in 50 south Indian grasses from four different sites. AM fungal diversity was also compared among the different sites. Forty-four of the 50 grasses examined had AM association and dual association with DSE fungi occurred in 25 grasses. We report for the first time AM and DSE fungal status in 23 and 27 grasses respectively. Arum-type AM morphology was the dominant occurring in 21 grasses with typical Paris-type colonization occurring in 6 grasses. AM morphology is reported for the first time in 35 grasses. Over the different sites, spore density in the soil ranged from 5–22 per 100 g air-dried soil. Spores of 11 AM fungal taxa were isolated from the soil samples of grasses of which nine belonged to Glomus, one to Acaulospora and one to Scutellospora. No significant relationship existed between AM fungal colonization and spore numbers. Species richness was high in site II and Glomus aggregatum, Glomus viscosum and Glomus mosseae were most frequent species at different sites. Overall species diversity indices (Simpson index, Shannon-Weaver index, species equitability index) differed significantly between sites.     

丛枝菌根真菌群落沿高寒草原海拔梯度的变化特征

基于丛枝菌根(Arbuscular mycorrhizal,AM)真菌孢子形态学的鉴定,对沿不同海拔(4584、4628、4744、4880、4956 m)梯度采集的高寒草原建群植物根际土壤样品进行了分析。结果表明,高寒草原AM真菌属、种构成均较简单,Acaulospora、Claroideoglomus、Funneliformis、Glomus属见于各海拔梯度,海拔4744 m地带未见Pacispora属,海拔4744、4956 m地带无Scutellospora属分布,Rhizophagus属仅见于海拔4584 m地带。随海拔上升,AM真菌种数、物种丰度均呈显著下降;海拔4584—4880 m范围Shannon-Weiner指数(H)无显著差异,但在最高海拔时显著下降;优势种种数及所占比例与海拔梯度则呈显著正相关(Funneliformis geosporum、Claroideoglomus claroideum为不同海拔梯度优势种);沿海拔梯度,孢子密度基本呈单峰分布格局,峰值出现在海拔4744 m地带;海拔梯度对菌根侵染效应影响显著,菌根侵染率、侵染强度和丛枝丰度随海拔上升均呈显著下降趋势;不同海拔梯度高寒草原AM真菌群落相似度(Sorensen相似性系数0.821—0.969)较高,并在总体上表现出随海拔梯度增大而降低的趋势。土壤pH值、有效磷、有机碳、海拔对AM真菌的群落分布均产生显著影响,尤以海拔的影响最为显著。研究结果对预测高寒草原微生物的作用与影响,以及高寒草原环境对全球变化的响应等提供了理论依据。     

Effect of long-term nitrogen fertilization on mycorrhizal fungi associated with a dominant grass in a semiarid grassland

We studied the diversity of arbuscular mycorrhizal fungi (AMF) in semiarid grassland and the effect of long-term nitrogen (N) fertilization on this fungal community. Root samples of Bouteloua gracilis were collected at the Sevilleta National Wildlife Refuge (New Mexico, USA) from control and N-amended plots that have been fertilized since 1995. Small subunit rDNA was amplified using AMF specific primers NS31 and AM1. The diversity of AMF was low in comparison with other ecosystems, only seven operational taxonomic units (OTU) were found in B. gracilis and all belong to the genus Glomus. The dominant OTU was closely related to the ubiquitous G. intraradices/G. fasciculatum group. N-amended plots showed a reduction in the abundance of the dominant OTU and an increase in AMF diversity. The greater AMF diversity in roots from N-amended plots may have been the result of displacement of the dominant OTU, which facilitated detection of uncommon AMF. The long-term implications of AMF responses to N enrichment for plant carbon allocation and plant community structure remain unclear.     

Diversity of arbuscular mycorrhizal fungi colonising roots of the grass species<Emphasis Type="Italic"> Agrostis capillaris</Emphasis> and<Emphasis Type="Italic"> Lolium perenne</Emphasis> in a field experiment

Analysis of arbuscular mycorrhizal (AM) fungal diversity through morphological characters of spores and intraradicular hyphae has suggested previously that preferential associations occur between plants and AM fungi. A field experiment was established to investigate whether AM fungal diversity is affected by different host plants in upland grasslands. Indigenous vegetation from plots in an unimproved pasture was replaced with monocultures of either Agrostis capillaris or Lolium perenne. Modification of the diversity of AM fungi in these plots was evaluated by analysis of partial sequences in the large subunit (LSU) ribosomal RNA (rDNA) genes. General primers for AM fungi were designed for the PCR amplification of partial sequences using DNA extracted from root tissues of A. capillaris and L. perenne. PCR products were used to construct LSU rDNA libraries. Sequencing of randomly selected clones indicated that plant roots were colonised by AM fungi belonging to the genera Glomus, Acaulospora and Scutellospora. There was a difference in the diversity of AM fungi colonising roots of A. capillaris and L. perenne that was confirmed by PCR using primers specific for each sequence group. These molecular data suggest the existence of a selection pressure of plants on AM fungal communities.     

Mechanical soil disturbance as a determinant of arbuscular mycorrhizal fungal communities in semi-natural grassland

While the effect of disturbance on overall abundance and community composition of arbuscular mycorrhizal (AM) fungi has been researched in agricultural fields, less is known about the impact in semi-natural grasslands. We sampled two AM plant species, Festuca brevipila and Plantago lanceolata, from an ongoing grassland restoration experiment that contained replicated plowed and control plots. The AM fungal community in roots was determined using nested PCR and LSU rDNA primers. We identified 38 phylotypes within the Glomeromycota, of which 29 belonged to Glomus A, six to Glomus B, and three to Diversisporaceae. Only three phylotypes were closely related to known morphospecies. Soil disturbance significantly reduced phylotype richness and changed the AM fungal community composition. Most phylotypes, even closely related ones, showed little or no overlap in their distribution and occurred in either the control or disturbed plots. We found no evidence of host preference in this system, except for one phylotype that preferentially seemed to colonize Festuca. Our results show that disturbance imposed a stronger structuring force for AM fungal communities than did host plants in this semi-natural grassland.     

Diversity and efficiency of arbuscular mycorrhizal fungi in soils from organic chili (Capsicum frutescens) farms

No previous studies have been conducted on the diversity and population of arbuscular mycorrhizal fungi (AMF) in relation to organically grown chili (Capsicum frutescens L.) in Thailand. This study was carried out to investigate the diversity and status of AMF populations at four organically managed farms in Ubon Ratchathani and Sisaket provinces. The effects of each AMF species on the growth and nutrient uptake of chili grown in sterile, organically managed soil were determined. Fourteen AM fungal taxa belonging to the genera Acaulospora (4 spp.), Entrophospora (1 sp.), Glomus (7 spp.) and Scutellospora (2 spp.) were found. Among these, Glomus was the dominant genus found at all sites, followed by Acaulospora. The spore density and root colonization of AMF on chili did not vary significantly among the sites. The effects of ten selected AMF species on the growth of chili showed that Gl. clarum RA0305 increased the growth, flowering, and fruit production of chili, and also increased the P uptake significantly, compared to non-mycorrhizal plants. This fungus showed the highest potential as a promoter of growth, flowering and yield in organically managed chili production.     

Arbuscular Mycorrhizae in association with aquatic and marshy plant species in Goa,India

Of the 20 plant species of hydrophytes screened for Arbuscular Mycorrhizal (AM) fungal root colonization, 10 aquatic plants (out of 14 species) and five marshy plants (out of six species) were found to be mycorrhizal, while the remaining species were non mycorrhizal. Vesicular colonization occurred in 12 plant species while arbuscular colonization was restricted to only three plant species. A rooted submerged pteridophyte viz., Isoetes coromandelina L. was found to be mycorrhizal exhibiting vesicular colonization. In all, two genera viz., Glomus and Scutellospora, the former being dominant, were recorded. The most common AM fungal species Glomus claroideum was recovered from 14 plant species.     

Distribution of dominant arbuscular mycorrhizal fungi among five plant species in undisturbed vegetation of a coastal grassland

Most plant species in mixed grassland vegetation are colonized by arbuscular mycorrhizal (AM) fungi. Previous studies have reported differences in host preferences among AM fungi, although the fungi are known to lack host specificity. In the present study, the distribution of phylogenetic groups of AM fungi belonging to a clade of Glomus species was studied in five plant species from a coastal grassland in Denmark. The occurrence of the fungi was determined by PCR analyses of fungal large subunit ribosomal DNA sequences amplified from root fragments using a specific primer set. The results showed that the dominant Glomus species were able to colonize all the studied plant species, supporting the view that the AM fungi represent a large underground interconnecting mycelial network.     

Molecular study of arbuscular mycorrhizal fungi colonizing the sporophyte of the eusporangiate rattlesnake fern (<Emphasis Type="Italic">Botrychium virginianum</Emphasis>, Ophioglossaceae)

The arbuscular mycorrhizal (AM) fungi colonizing the sporophytes of the eusporangiate rattlesnake fern (Botrychium virginianum, Ophioglossaceae) in its Hungarian population were investigated in the present study. Different regions of the nrRNA gene complex were analyzed using two different primer sets. These produced similar results for the detected AM fungi phylotypes. Several AM fungal lineages were associated with sporophytes of B. virginianum. Phylogenetic analyses of different partial small subunit datasets grouped one lineage into the Gigasporaceae, showing similarities with Scutellospora sequences. In addition to unidentified Scutellospora phylotypes, it is possible that S. gregaria also colonized the fern. Several AM fungal phylotypes colonizing the sporophytes grouped into Glomus group A. They did not form distinct clades but grouped with sequences of AM fungi with different geographic and host origins. One main lineage clustered into the widespread G. fasciculatum/G. intraradices group and one into the subgroup GlGrAc, while others had no affinity to the subgroups of Glomus group A. As AM fungal phylotypes associated with B. virginianum seem to belong to widespread AM fungal taxa and show no specificity to this fern, we suppose that the previously described special anatomy of AM of B. virginianum is determined by the plant.     

The diversity of arbuscular mycorrhizal fungi in the subtropical forest of Huangshan (Yellow Mountain), East-Central China

The world heritage of Huangshan is located in the east-central China. In order to obtain a better overview of biodiversity in Huangshan, we investigated the diversity of arbuscular mycorrhizal fungi in the soil of Huangshan. Forty-two rhizosphere soil samples were collected and 989 arbuscular mycorrhizal fungal spore samples were obtained using the wet-sieving method. Twenty-five species of arbuscular mycorrhizal fungi were identified from the collections. The species were of the genera Acaulospora (6 species), Entrophospora (1 species), Glomus (16 species) and Scutellospora (2 species). Acaulospora and Glomus were dominant at the study site. The arbuscular mycorrhizal fungi spore density ranged from 45 to 3,250 per 100 g soil (average 839), and the species richness of arbuscular mycorrhizal fungi ranged from 1 to 9 (average 4.2) per soil sample. Shannon–Wiener index and Simpson’s index were calculated to evaluate the arbuscular mycorrhizal fungal diversity. The diversity of arbuscular mycorrhizal fungal community in the subtropical forest of Huangshan may be the result of mutual selection between arbuscular mycorrhizal fungi and the ecological environment.     

Arbuscular mycorrhizal fungi associated with the Meliaceae on Hainan island, China

Species richness, spore density, frequency of occurrence, and relative abundance of AM fungi were determined in rhizosphere soil samples from nine tropical rainforest sites on Hainan island, south China, and the arbuscular mycorrhizal (AM) status of members of the Meliaceae was examined. All 28 plant taxa investigated (25 species including two varieties of 1 species and three varieties of another) were colonized by AM fungi. The mean proportion of root length colonized was 56% (range 10–95%). Vesicles were observed in 27 and hyphal coils in 26 of the 28 plant taxa. Mycorrhizas were of the Paris-type or intermediate-type, with no Arum-type mycorrhizas observed. Species richness of AM fungi varied from 3 to 15 and spore density from 46 to 1,499 per 100 g rhizosphere soil. Of 33 AM fungal taxa in five genera isolated and identified, 18 belonged to Glomus, 9 to Acaulospora, 1 to Entrophospora, 2 to Gigaspora, and 3 to Scutellospora. Acaulospora and Glomus were the dominant genera identified. Glomus claroideum was the taxon most commonly isolated, with a frequency of occurrence of 56.5% and relative abundance of 10.4%. A positive correlation was found between percentage of root length colonization and species richness. However, there was no correlation between spore density and percentage of root length colonized by AM fungi.     

Arbuscular mycorrhizal structure and fungi associated with mosses

We investigated the colonization and diversity of arbuscular mycorrhizal (AM) fungi associated with 24 moss species belonging to 16 families in China. AM fungal structures, i.e. spores, vesicles, hyphal coils (including intracellular hyphae), or intercellular nonseptate hyphae, were found in 21 moss species. AM fungal structures (vesicles, hyphal coils, and intercellular nonseptate hyphae) were present in tissues of 14 moss species, and spores and nonseptate hyphae on the surface of gametophytes occurred in 15 species. AM fungal structures were present in 11 of the 12 saxicolous moss species and in six of the ten terricolous moss species, but absent in two epixylous moss species. AM fungal structures were only observed in moss stem and leaf tissues, but not in rhizoids. A total of 15 AM fungal taxa were isolated based on trap culture with clover, using 13 moss species as inocula. Of these AM fungi, 11 belonged to Glomus, two to Acaulospora, one to Gigaspora, and one to Paraglomus. Our results suggest that AM fungal structures commonly occur in most mosses and that diverse AM fungi, particularly Glomus species, are associated with mosses.     

Arbuscular mycorrhizal fungi associated with common pteridophytes in Dujiangyan,southwest China

The colonization and diversity of arbuscular mycorrhizal (AM) fungi associated with common pteridophytes were investigated in Dujiangyan, southwest China. Of the 34 species of ferns from 16 families collected, 31 were colonized by AM fungi. The mean percentage root length colonized was 15%, ranging from 0 to 47%. Nineteen species formed Paris-type and 10 intermediate-type AM. In two ferns, only rare intercellular non-septate hyphae or vesicles were observed in the roots and AM type could not be determined. Of the 40 AM fungal taxa belonging to five genera isolated from rooting-zone soils, 32 belonged to Glomus, five to Acaulospora, one to Archaeospora, one to Entrophospora, and one to Gigaspora. Acaulospora and Glomus were the dominant genera and Glomus versiforme was the most common species. The average AM spore density was 213 per 100 g air-dried soil and the average species richness was 3.7 AM species per soil sample. There was no correlation between spore density and percentage root length colonized by AM fungi.