SNOW ALGAE OF THE WINDMILL ISLANDS, CONTINENTAL ANTARCTICA: DESMOTETRA AUREOSPORA, SP. NOV. AND D. ANTARCTICA, COMB. NOV. (CHLOROPHYTA)

Two cryophilic Desmotetra species, D. aureospora , sp. nov., and D. antarctica (Fritsch) Ling appear to be unique to the southern hemisphere snow ecosystem, or at least to the Windmill Island region, Antarctica. They have not been encountered in previous extensive studies of the Arctic and northern alpine regions. Also unusual are the higher pH (6.8 and 7.8) and conductivities of 279 μS·cm⁻¹ and 426 μS·cm⁻¹ for habitat conditions of D. antarctica that can be attributed to the influence of penguin guano. Both species are characterized by cells enveloped in individual mucilage layers, 1–3 contractile vacuoles, and a cup-shaped chloroplast containing a diffuse pyrenoid. The cells divided in three planes to form cubical loosely aggregated green cell packages embedded in mucilage. Vegetative cells of the two species cannot be distinguished with certainty; however, their zygospores are very different. Desmotetra aureospora has spherical, smooth-walled, golden zygospores, whereas D. antarctica has pale, yellow green, aereolate zygospores. Mucilage stalk morphology of cells in stationary-phase cultures can also be used to separate the two species. Zygospores of D. antarctica have previously been identified as the snow alga Trochiscia antarctica Fritsch. Both species are currently maintained in culture at the Australian Antarctic Division. The cultures did not grow at temperatures above 15° C. The two species are compared with the soil alga D. stigmatica (Deason) Deason et Floyd, the only other species in the genus, and also with Chlorosarcina stigmatica Deason strain T105. Results show that the three Desmotetra species form a natural group and that the absence or presence of a wall on the zoospore is of dubious value in classifications of green algal taxa above the species level.     

Biomass of the cryptoendolithic microbiota from the Antarctic desert.

Extractable lipid phosphate was used to determine the biomass of the cryptoendolithic microbiota that colonizes sandstone rocks in the Ross Desert region of Antarctica. The mean amount of lipid phosphate was 0.053 micromole/cm2 (n = 9), which equals 2.54 g of C per m2 (range, 1.92 to 3.26 g of C per m2) of biomass in the biotic zone of these rocks. The turnover of phospholipids was comparable to that of temperate sediments and soils (t1/2, 6 to 9 days) at 0 degrees C and a light intensity of 305 micromoles of photons per m2 per s, indicating that this was a good method to measure viable biomass. The biomass was 0.3 to 9.6% of the total carbon content of the biotic zone and was about 2 orders of magnitude smaller than the epilithic lichen dry weight at a location some 7 degrees north in latitude. The cryptoendolithic microbiota had a uniform density throughout the biotic zone under the rock surface. The results indicate that the cryptoendolithic microbial biomass is small but viable in this unique, extreme ecosystem.     

Carbon metabolism of the cryptoendolithic microbiota from the Antarctic desert.

The carbon metabolism of the cryptoendolithic microbiota of sandstones from the Ross Desert of Antarctica was studied in situ and in vitro. Organic and inorganic carbon compounds were metabolized by the microbiota, with bicarbonate incorporation into community lipids occurring primarily in the light. Light intensity affected the photometabolism of carbon with a photosynthesis-intensity response optimum at about 200 to 300 micromoles of photons per m2 per s. Photosynthesis was also affected by temperature, with a minimum activity at -5 degrees C, an optimum activity at 15 degrees C, and complete inhibition at 35 degrees C, indicating that the cryptoendolithic community was psychrophilic. The primary source of CO2 for photosynthesis in situ was the atmosphere. CO2 may also be photometabolized by using the carbon produced from respiration within the endolithic community. Photosynthesis occurred maximally when the microbiota was wet with liquid water and to a lesser extent in a humid atmosphere. This simple microbial community, therefore, exists under extremes of water, light, and temperature stress which affect and control its metabolism.     

CARBON PARTITIONING WITHIN PHAEOCYSTIS ANTARCTICA (PRYMNESIOPHYCEAE) COLONIES IN THE ROSS SEA, ANTARCTICA

The haptophyte Phaeocystis antarctica Karsten is a dominant species within the seasonal bloom in the Ross Sea. One of the unique characteristics of this form is that carbon is partitioned between the cells and the colonial matrix, a relationship that is poorly documented for this region. We combined particulate organic carbon measurements and microscopic analysis of P. antarctica -dominated samples to assess the contribution of single cells, colony-associated cells, and mucilage to the carbon concentrations of waters with P. antarctica. Two cruises to the Ross Sea were completed, one in austral spring 1994 and one in summer 1995–1996. In 1994 the bloom was dominated by colonial P. antarctica that contributed up to 96% of the total autotrophic carbon, whereas in 1995–1996 a mixture of P. antarctica and diatoms occurred. P. antarctica colony volume ( V ) was related to colonial cell number ( N _C) by the relationship V = 417 × N _C^1.67. Total colony carbon (C_COL) was calculated as the sum of cell carbon (C_CC) and mucus-related carbon (C_M). We found the contribution of mucus carbon to be 213 ng C mm ^{− 3} of colony volume. For P. antarctica -dominated assemblages sampled at the peak of the bloom, C_M represented a minor fraction (14 ± 4%) of colony carbon, and during early summer conditions C_M was at most 33% of C_COL. This organism plays a cardinal role in the carbon cycle of many regions. These results constrain the partitioning of carbon between cellular material and the colony matrix, information that is necessary to accurately describe the biogeochemical cycles influenced by this species.     

Comparative activity and functional ecology of permafrost soils and lithic niches in a hyper‐arid polar desert

Permafrost in the high elevation McMurdo Dry Valleys of Antarctica ranks among the driest and coldest on Earth. Permafrost soils appear to be largely inhospitable to active microbial life, but sandstone lithic microhabitats contain a trophically simple but functional cryptoendolithic community. We used metagenomic sequencing and activity assays to examine the functional capacity of permafrost soils and cryptoendolithic communities in University Valley, one of the most extreme regions in the Dry Valleys. We found metagenomic evidence that cryptoendolithic microorganisms are adapted to the harsh environment and capable of metabolic activity at in situ temperatures, possessing a suite of stress response and nutrient cycling genes to fix carbon under the fluctuating conditions that the sandstone rock would experience during the summer months. We additionally identified genes involved in microbial competition and cooperation within the cryptoendolithic habitat. In contrast, permafrost soils have a lower richness of stress response genes, and instead the metagenome is enriched in genes involved with dormancy and sporulation. The permafrost soils also have a large presence of phage genes and genes involved in the recycling of cellular material. Our results underlie two different habitability conditions under extreme cold and dryness: the permafrost soil which is enriched in traits which emphasize survival and dormancy, rather than growth and activity; and the cryptoendolithic environment that selects for organisms capable of growth under extremely oligotrophic, arid and cold conditions. This study represents the first metagenomic interrogation of Antarctic permafrost and polar cryptoendolithic microbial communities.     

Reshaping of sandstone surfaces by cryptoendolithic cyanobacteria: bioalkalization causes chemical weathering in arid landscapes

We report a novel weathering mechanism in South African sandstone formations, where cryptoendolithic cyanobacteria induce weathering by substrate alkalization during photosynthesis. As a result, the upper rock part is loosened and then eroded away by physical forces such as wind, water, trampling. This special type of ‘exfoliation’ is widely distributed and affects the geomorphology of whole sandstone mountain ranges and outcrops across several biomes. We show, that this weathering type is initiated by bioalkalization because of the photosynthesis of cryptoendolithic (i.e. those organisms living in small tight open spaces between the sand grains) cyanobacteria causing pH values high enough to enhance silica solution in the cryptoendolithic zone. As modern cyanobacteria are the initial photoautotrophic colonizers of bare rocks in arid and semiarid landscapes, it is possible that they may also have played a significant role in shaping sandstone landscapes in the geological past.     

Microbial diversity of cryptoendolithic communities from the McMurdo Dry Valleys,Antarctica

In the McMurdo Dry Valleys of Antarctica, microorganisms colonize the pore spaces of exposed rocks and are thereby protected from the desiccating environmental conditions on the surface. These cryptoendolithic communities have received attention in microscopy and culture-based studies but have not been examined by molecular approaches. We surveyed the microbial biodiversity of selected cryptoendolithic communities by analyzing clone libraries of rRNA genes amplified from environmental DNA. Over 1,100 individual clones from two types of cryptoendolithic communities, cyanobacterium dominated and lichen dominated, were analyzed. Clones fell into 51 relatedness groups (phylotypes) with > or =98% rRNA sequence identity (46 bacterial and 5 eucaryal). No representatives of Archaea were detected. No phylotypes were shared between the two classes of endolithic communities studied. Clone libraries based on both types of communities were dominated by a relatively small number of phylotypes that, because of their relative abundance, presumably represent the main primary producers in these communities. In the lichen-dominated community, three rRNA sequences, from a fungus, a green alga, and a chloroplast, of the types known to be associated with lichens, accounted for over 70% of the clones. This high abundance confirms the dominance of lichens in this community. In contrast, analysis of the supposedly cyanobacterium-dominated community indicated, in addition to cyanobacteria, at least two unsuspected organisms that, because of their abundance, may play important roles in the community. These included a member of the alpha subdivision of the Proteobacteria that potentially is capable of aerobic anoxygenic photosynthesis and a distant relative of Deinococcus that defines, along with other Deinococcus-related sequences from Antarctica, a new clade within the Thermus-Deinococcus bacterial phylogenetic division.     

Tufted Hairgrass (Deschampsia caespitosa) Exhibits a Lower Photosynthetic Plasticity than Antarctic Hairgrass (D. Antarctica)

The aim of our work was to assess photosynthetic plasticity of two hairgrass species with different ecological origins (a temperate zone species, Deschampsia caespitosa (L.) Beauv. and an Antarctic species, D. antarctica) and to consider how the anticipated climate change may affect vitality of these plants. Measurements of chlorophyll fluorescence showed that the photosystem Ⅱ (PSII) quantum efficiency of D. caespitosa decreased during 4 d of incubation at 4℃ but it remained stable in D. antarctica. The fluorescence half-rise times were almost always lower in D. caespitosa than in D. antarctica,irrespective of the incubation temperature. These results indicate that the photosynthetic apparatus of D. caespitosa has poorer performance in these conditions. D. caespitosa reached the maximum photosynthesis rate at a higher temperature than D. antarctica although the values obtained at 8℃ were similar in both species. The photosynthetic water-use efficiency (photosynthesis-to-transpiration ratio, P/E) emerges as an important factor demonstrating presence of mechanisms which facilitate functioning of a plant in non-optimal conditions. Comparison of the P/E values, which were higher in D. antarctica than in D. caespitosa at low and medium temperatures, confirms a high degree of adjustability of the photosynthetic apparatus in D. antarctica and unveils the lack of such a feature in D. caespitosa.     

Epilithic and Cryptoendolithic Cyanobacteria of Clarens Sandstone Cliffs in the Golden Gate Highlands National Park,South Africa

A cryptoendolithic cyanobacterial community is described from Clarens sandstone in a montane ecosystem of the north-eastern Orange Free State, South Africa. The community is dominated by a species of the unicellular cyanobacterial genus Chroococcidiopsis. Chlorophyll_a content of the colonised sandstone ranged between 44.3 and 51.8mg m^?2. The establishment and species composition of an artificially created tintenstrich cyanobacterial community is documented. The possible contribution of cryptoendolithic cyanobacterial communities in the biological formation of hollows and caves in Clarens sandstone cliffs is discussed.     

A description of seven Antarctic marine gymnamoebae including a new subspecies, two new species and a new genus: Neoparamoeba aestuarina antarctica n. subsp., Platyamoeba oblongata n. sp., Platyamoeba contorta n. sp. and Vermistella antarctica n. gen. n. sp

Seven marine gymnamoebae were isolated from different environments of seawater, slush (pack ice meltwater), and sediment in the Ross Sea area of Antarctica. All amoebae were isolated and maintained at temperatures below 4 degrees C. Growth, rate of locomotion, and general morphology were observed at an environmentally appropriate temperature (1 degrees C) and at room temperature (approximately 25 degrees C). Molecular (srDNA sequences) and microscopical techniques were used to identify the gymnamoebae and establish their phylogenetic affinities. Three isolates (S-131-2, SL-200, and W4-3) were assigned to a psychrophilic subspecies of Neoparamoeba aestuarina, N. aestuarina antarctica n. subsp., one isolate (S-205) was assigned to a new species of Platyamoeba, P. oblongata n. sp., two isolates (W51C#4 & W51C#5) were also assigned to a new species of Platyamoeba, P. contorta n. sp., and one isolate (S-241) was a novel psychrophilic gymnamoeba Vermistella antarctica n. gen. n. sp. Molecular and morphological results revealed that V. antarctica was not related to any described family of gymnamoebae. Strains S-205, W51C#4, and W51C#5 were capable of locomotion at room temperature, while strains SL-200, S-131-2, W4-3, and S-241 exhibited locomotion only below approximately 10 degrees C. Our results imply that the Antarctic environment is host both to cosmopolitan gymnamoebae that have acquired adaptations for existence at low environmental temperature and to apparently novel psychrophilic amoebae described here for the first time.     

Computational approach to solvent-free synthesis of ethyl oleate using Candida rugosa and Candida antarctica B Lipases. I. Interfacial activation and substrate (ethanol, oleic acid) adsorption

This paper presents the results of a MM2 study of the adsorption of oleic acid and ethanol/water in the tunnel and active-site models of lipases from Candida rugosa and Candida antarctica B. The role of an interface polar/no polar in the opening of C. rugosa lipase's lid is also addressed, discussed and analyzed at the level of the conformational changes needed to achieve the lipase open form. The adsorption of oleic acid and alcohols considering C. antarctica B, a lipase not interfacially activated, is also presented. In this case, the tunnel is shorter than in case of C. rugosa lipase. Two different pockets can be visualized at the active site-tunnel model of C. antarctica B lipase: one for the acyl group and another for the alcohol. Wrong location of alcohol and oleic acid severely hinders reaction because it hinders the H-transfer to histidine, a key step in the reaction mechanism. Right location of alcohol decreases the possibility of alcohol inhibition. In the case of C. rugosa, no restrictions for ethanol/water location are found. For that lipase, a second adsorption site for oleic acid (outside the tunnel) is presented. This site is the exit tunnel of the ester product when oleic acid is adsorbed in the tunnel. Experimental results of our own that correlate with this study are presented.     

The genus Perkinsiana (Polychaeta, Sabellidae) from Antarctica, with descriptions of the new species P. milae and P. borsibrunoi

Perkinsiana antarctica (Kinberg, 1867) and P. littoralis (Hartman, 1967) are redescribed from holo- and topotypes. Two new species, P. milae and P. borsibrunoi , are described from the Ross Sea (Antarctica) and compared with other species of the genus. Records of P. antarctica are numerous, but re-examination indicates that many of these represent misidentifications: the species may have a distribution limited to subantarctic areas.     

Apiosordaria antarctica and Thielavia antarctica, two new ascomycetes from Antarctica

Two new species of ascomycetes, Apiosordaria antarctica, isolated from soil, and Thielavia antarctica, isolated from a sample of the lichen Usnea cf. aurantio-atra, both collected on King George Island (Antarctica), are described and illustrated. Apiosordaria antarctica is characterized by ostiolate ascomata with agglutinated hairs, eight-spored, uniseriate and cylindrical asci, and two-celled, irregularly navicular ascospores, with an upper cell ornamented with very small warts and with an apical germ pore. Thielavia antarctica is characterized by nonostiolate ascomata, with a thick peridium, eight-spored, cylindrical asci, uniseriate, oblate, ovoid ascospores, a slightly protruding apical germ pore, and a phialidic anamorph.     

Chloroplast gene arrangement variation within a closely related group of green algae (Trebouxiophyceae, Chlorophyta)

The 22 published chloroplast genomes of green algae, representing sparse taxonomic sampling of diverse lineages that span over one billion years of evolution, each possess a unique gene arrangement. In contrast, many of the >190 published embryophyte (land plant) chloroplast genomes have relatively conserved architectures. To determine the phylogenetic depth at which chloroplast gene rearrangements occur in green algae, a 1.5-4 kb segment of the chloroplast genome was compared across nine species in three closely related genera of Trebouxiophyceae (Chlorophyta). In total, four distinct gene arrangements were obtained for the three genera Elliptochloris, Hemichloris, and Coccomyxa. In Elliptochloris, three distinct chloroplast gene arrangements were detected, one of which is shared with members of its sister genus Hemichloris. Both species of Coccomyxa examined share the fourth arrangement of this genome region, one characterized by very long spacers. Next, the order of genes found in this segment of the chloroplast genome was compared across green algae and land plants. As taxonomic ranks are not equivalent among different groups of organisms, the maximum molecular divergence among taxa sharing a common gene arrangement in this genome segment was compared. Well-supported clades possessing a single gene order had similar phylogenetic depth in green algae and embryophytes. When the dominant gene order of this chloroplast segment in embryophytes was assumed to be ancestral for land plants, the maximum molecular divergence was found to be over two times greater in embryophytes than in trebouxiophyte green algae. This study greatly expands information about chloroplast genome variation in green algae, is the first to demonstrate such variation among congeneric green algae, and further illustrates the fluidity of green algal chloroplast genome architecture in comparison to that of many embryophytes.     

Biomass of the cryptoendolithic microbiota from the Antarctic desert

Extractable lipid phosphate was used to determine the biomass of the cryptoendolithic microbiota that colonizes sandstone rocks in the Ross Desert region of Antarctica. The mean amount of lipid phosphate was 0.053 micromole/cm2 (n = 9), which equals 2.54 g of C per m2 (range, 1.92 to 3.26 g of C per m2) of biomass in the biotic zone of these rocks. The turnover of phospholipids was comparable to that of temperate sediments and soils (t1/2, 6 to 9 days) at 0 degrees C and a light intensity of 305 micromoles of photons per m2 per s, indicating that this was a good method to measure viable biomass. The biomass was 0.3 to 9.6% of the total carbon content of the biotic zone and was about 2 orders of magnitude smaller than the epilithic lichen dry weight at a location some 7 degrees north in latitude. The cryptoendolithic microbiota had a uniform density throughout the biotic zone under the rock surface. The results indicate that the cryptoendolithic microbial biomass is small but viable in this unique, extreme ecosystem.     

A novel hydrophilic support, CoFoam, for enzyme immobilization

Lipases from different sources (porcine pancreas, Mucor miehei and Candida antarctica B) were covalently immobilized on a hydrophilic polyurethane composite (CoFoam). Their hydrolytic activities assayed with tributyrin were 0.55, 2.1 and 447 U g(-1), respectively. The activity of the C. antarctica B composite in the synthesis of methyl oleate in hexane was 8.8 U g(-1) compared to 60.6 U g(-1) for commercial Novozyme 435. The advantage of the CoFoam composite lies in the low pressure drop in a packed-bed reactor at fairly large flow rates. For example, at flow rates of 10-12 l min(-1), the pressure drop over 15 cm is typically 3 kPa.     

Wittmannia antarctica N. G., N. Sp. (Nosematidae), a New Hyperparasite in the Antarctic Dicyemid Mesozoan Kantharella antarctica

ABSTRACT. Collections of the dicyemid mesozoan Kantharella antarctica were made in the Weddell Sea during the Antarctic Expedition of the research vessel RV Polarstern in 1990 and 1991. A diplokaryotic microsporidian was found infecting all nematogens from all the samples taken in both years. The infected cells contained all developmental stages. Merogony initially was monokaryotic and spoorogony of diplokaryotic sporonts was by multiple fission. The stained ovoidal spores measured between 4.3-6 μm X 1.7-2.3 μm. The ultrastructural findings come from 11 specimens of Kantharella antarctica that were cut in serial sections. All developmental stages were noteworthy because of the myelinosomes situated adjacent to each diplokaryon. Similarly conspicuous were some organelles in the spore: a prominent, extraordinarily electron dense anterior portion of the polaroplast and the posterior vacuole. The isofilar polar filament with a diameter of about 115 nm showed 9-11 coils. The great number of empty spore cases together with an extruded polar filament are indicative of an autoinfection. Though these characteristics resemble in part those of the genus Nosema from the family Nosematidae, the species in Kantharella antarctica differs from the former by its unusual development, life cycle and unusual host. Thus, this new species has been placed in a new genus and the name Wittmannia antarctica proposed.     

Characterization of antifreeze activity in Antarctic plants

Deschampsia antarctica and Colobanthus quitensis are the only vascular plants to have colonized the Maritime Antarctic, which is characterized by its permanently low temperature and frequent summer frosts. To understand how the plants survive freezing temperatures year-round, antifreeze activity was assayed in apoplastic extracts obtained from both non-acclimated and cold-acclimated Antarctic plants. By observing the shape of ice crystals grown in dilution series of the extracts, it was found that D. antarctica had antifreeze activity, but C. quitensis did not. D. antarctica exhibited antifreeze activity in the non-acclimated state and this activity increased after cold acclimation. The antifreeze activity in D. antarctica was labile to proteolysis and high temperature, active over a wide pH range, and associated with molecules greater than 10 kDa in molecular weight. These results show that D. antarctica produces antifreeze proteins that are secreted into the apoplast. When examined by SDS-PAGE, the apoplastic extracts from cold-acclimated D. antarctica exhibited 13 polypeptides. It is concluded that D. antarctica accumulates AFPs as part of its mechanism of freezing tolerance. Moreover, this is the first plant in which antifreeze activity has been observed to be constitutive.