Systematic variation in the logarithmic ranges in abundance of freshwater phytoplankton populations

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Interannual and between-site variability in the occurrence of clear water phases in two shallow Mediterranean lakes

It is widely accepted that clear water phases constitute a regular stage in the seasonal succession of plankton in dimictic lakes and reservoirs (i.e. PEG Model). The occurrence of such a phenomenon in Mediterranean shallow lakes is characterised by a marked interannual variability, which makes it difficult to establish reliable predictions on the dynamics and functioning of plankton in these ecosystems. In the present paper we analyse the factors influencing the occurrence of the clear water phases in the two shallow lakes of the Albufera of Adra, a coastal wetland region of south-eastern Spain: Lake Honda and Lake Nueva. Despite their geographical proximity, both lakes depicted large hydrological and limnological differences. Lake Honda is an epigenic and recharge lake that is strongly influenced by the hydrological conditions in its watershed, while Lake Nueva can be classified as a hypogenic and discharge lake and, as such, is less affected by the hydrological regime. In contrast, the morphometry, exposure and fetch of Lake Nueva make this ecosystem especially sensitive to wind forcing. Clear water phases in these shallow lakes were linked with periods of low thermal stability and the dominance of small-edible algae in the phytoplankton community, both of which allowed a Daphnia magna population to grow up and induce the algae collapse by grazing. In Lake Honda, those conditions were met during the spring of 2002 under the influence of intense rainfall-events, while in Lake Nueva the clear water phase was induced in the spring of 2003 by the occurrence of strong and frequent wind events. In both lakes, a relatively high water column thermal stability and the abundance of cyanobacteria early in the spring prevented the development of the Daphnia magna population and the occurrence of the clear water phase.     

Effects of a seasonal salinity change on periphyton biomass in a shallow tropical lagoon

In the Ebrié Lagoon (Cǒte d'Ivoire), growth of periphyton on bamboo stuck in the sediment is at the basis of the acadja, a low-cost system developed in order to enhance aquaculture of omnivorous fish like the tilapia Sarotherodon melanotheron. A survey based on hydrological, bacterial and algal data (including phytoplankton and periphyton) was conducted from November 1992 to June 1993 in an experimental structure. Climatic and hydrological seasonality was marked during the study. Succeeding to a rainy season, the oligohaline situation starting in November was characterized by low bacterial and chlorophyll biomass attached to the bamboo (respectively 1 and 18 mg m⁻²). The mesohaline situation observed from January featured a sharp increase in periphyton biomass, with a maximum in April (16 and 177 mg m⁻² for bacterial and algal biomass, respectively). The flood of the Agnéby river, induced in June by the local rains, originated again oligohaline conditions. The biomass decrease observed in May and June resulted from a shift towards low salinity (from 9.8 to 1.8 psu), a decrease in light availability (combined effects of a decreasing solar radiation during the rainy season and an increase of water turbidity due to the flood) and a lower phytoplankton biomass (therefore limiting the secondary epiphytism potentialities). In this shallow tropical environment characterized by high nutrient concentrations (due to local hydrology and organic nature of the substrate), the combination of seasonal variations of climatic (light availability), hydrological (salinity) and biological (abundance or lack of epiphytic algae) seems to control the periphyton biomass growing on bamboo. Therefore, marked seasonality in the production of resource available for the target fish would limit the interest of the acadja as an aquaculture system in brackish ecosystems.     

Seasonal dynamics of macrophytes and phytoplankton in shallow lakes: a eutrophication‐driven pathway from plants to plankton?

1. Seasonal relationships between macrophyte and phytoplankton populations may alter considerably as lakes undergo eutrophication. Understanding of these changes may be key to the interpretation of ecological processes operating over longer (decadal‐centennial) timescales. 2. We explore the seasonal dynamics of macrophytes (measured twice in June and August) and phytoplankton (measured monthly May–September) populations in 39 shallow lakes (29 in the U.K. and 10 in Denmark) covering broad gradients for nutrients and plant abundance. 3. Three site groups were identified based on macrophyte seasonality; 16 lakes where macrophyte abundance was perennially low and the water generally turbid (‘turbid lakes’); 7 where macrophyte abundance was high in June but low in August (‘crashing’ lakes); and 12 where macrophyte abundance was high in both June and August (‘stable’ lakes). The seasonal behaviour of the crashing and turbid lakes was extremely similar with a consistent increase in nutrient concentrations and chlorophyll‐a over May–September. By contrast in the stable lakes, seasonal changes were dampened with chlorophyll‐a consistently low (<10–15 μg L^?1) over the entire summer. The crashing lakes were dominated by one or a combination of Potamogeton pusillus, Potamogeton pectinatus and Zannichellia palustris, whereas Ceratophyllum demersum and Chara spp. were more abundant in the stable lakes. 4. A long‐term loss of macrophyte species diversity has occurred in many shallow lakes affected by eutrophication. One common pathway is from a species‐rich plant community with charophytes to a species‐poor community dominated by P. pusillus, P. pectinatus and Z. palustris. Such compositional changes may often be accompanied by a substantial reduction in the seasonal duration of plant dominance and a greater tendency for incursions by phytoplankton. We hypothesise a slow‐enacting (10–100 s years) feedback loop in nutrient‐enriched shallow lakes whereby increases in algal abundance are associated with losses of macrophyte species and hence different plant seasonal strategies. In turn such changes may favour increased phytoplankton production thus placing further pressure on remaining macrophytes. This study blurs the distinction between so‐called turbid phytoplankton‐dominated and clear plant‐dominated shallow lakes and suggests that plant loss from them may be a gradual process.     

太湖湖岸带浮游植物初级生产力特征及影响因素

利用高频溶解氧监测,估算了太湖梅梁湾湖岸带浮游植物初级生产力的高频变化特征。结合同步气象监测及浮游植物、浮游动物和营养盐的周年逐周观测数据,分析了气象和环境条件对富营养化湖泊浮游植物初级生产力的影响。结果发现,高频溶解氧监测估算的初级生产力变化与浮游藻类生物量的变化一致,能够反映出浮游植物生产力的昼夜变化、季节变化等规律。统计分析表明,气温对太湖这一富营养化湖泊初级生产力影响很大;氮的供给与浮游动物的选择性牧食也是影响浮游植物初级生产力的重要因素。湖岸带的水华堆积过程对初级生产力影响巨大,气象、水文过程又加剧了蓝藻水华初级生产力的变化幅度,反映出富营养化湖泊初级生产力可能存在极大的时空不均一性。研究表明,溶解氧高频监测法估算初级生产力能够捕捉到湖泊初级生产力的快速变化过程,可以用于富营养化湖泊初级生产力监测、蓝藻水华灾害预警中。     

Seasonality of phytoplankton in relation to silicon cycling and interstitial water circulation in large,shallow lakes of central Canada

The main basins of Lake Winnipeg (52°N 97°E) and Southern Indian Lake (57°N 99°W) had similar phytoplankton cycles during their open water seasons. A brief spring algal maximum was followed by an early summer minimum and, subsequently, an extended autumnal increase when highest biomasses were observed. The maxima were dominated by Melosira spp. The seasonal cycle of Melosira followed closely the seasonal cycle of dissolved Si. These basins exhibited a typical phytoplankton cycle for dimictic lakes even though they did not form a significant thermocline (1°C per meter).The lakes were well-mixed because they were shallow and had large wind fetches. Although thermal stability of the water column was always low, it was positive until maximum heat content was achieved at which time it became nil or negative. These lakes heated and cooled rapidly, and sediment heat storage was a substantial fraction of the total heat budget. Because heating and cooling of water and of sediments were out of phase, heat exchange at the sediment surface could control vertical circulation of interstitial water, nutrient exchange across the sediment-water interface and the seasonality of phytoplankton. Thermal gradients in the sediments during the heating season would be quite pronounced (4°C per meter).It is proposed that positive stability in interstitial waters during the heating season would impose molecular diffusive transport on the sediment column. When the lakes begin to cool, the upper interstitial water column would become thermally unstable and circulation would occur within the sediments. This would result in the observed net flux of dissolved Si, and other nutrients, out of the sediments into the overlying waters. As a consequence, in Lake Winnipeg and Southern Indian Lake the highest phytoplankton biomasses and productivity occurred in the late summer and autumn.     

Determining algal assemblages in oligotrophic lakes and streams: comparing information from newly developed pigment/chlorophyll a ratios with direct microscopy

1. Pigment analyses by high performance liquid chromatography (HPLC) are commonly used for determining algal groups in marine and estuarine areas but are underdeveloped in freshwaters. In this study, 15 characteristic pelagic algal species (representing five algal groups) of oligo‐ / mesotrophic lakes were cultured and pigment / Chl a ratios determined at three light intensities. 2. With the exception of cyanophytes, light treatment had little effect on pigment / Chl a ratios. This justifies the use of the same pigment / Chl a ratios during seasonal studies where light conditions may change. 3. The determined pigment / Chl a ratios were tested on seasonal samples from five oligo‐ / mesotrophic lakes and three streams using CHEMTAX software. Pigment ratios of both pelagic and benthic algal communities from the lakes and streams were analysed to determine whether the pelagic algae‐based ratios can be used for benthic algal communities. 4. HPLC combined with CHEMTAX was useful for identifying freshwater phytoplankton classes and for quantifying the abundance of phytoplankton groups. However, although correlations were significant for six of seven phytoplankton classes studied, they were weak and varied with season. 5. HPLC was valid for quantifying benthic diatom groups in stream samples, whereas for lakes more benthic algal groups were recorded with HPLC than with microscopy and correlations between the two methods were not significant. 6. The use of both HPLC and microscopy is recommended as a cost‐efficient method for analysing many samples. It is crucial, however, that the CHEMTAX software is calibrated with the correct information, and the user is aware of the limitations.     

Thermal stability and phytoplankton distribution

Thermal stability is the potential of water columns to mix, and has long been known to fundamentally influence the vertical and temporal distribution of phytoplankton. Essentially this is because it indirectly controls the amount of light available to phytoplankton.Under stable conditions of strong temperature gradients algal species (or assemblages of associated species) distribute vertically because they have sufficient time to exploit the attenuated light field at their preferred depths. This encourages a species diversity which, in the Southern Hemisphere, is especially exemplified by the extremely stable conditions under the permanent ice of Antarctic lakes.In other lakes stability commonly encourages growth of blue-green algae by permitting their positive buoyancy to place them in optimal light conditions, and by inhibiting the resuspension of competing non-buoyant species. Analogous patterns occur with motile species (Dinophyceae, Cryptophyceae, etc.), and with non-motile forms whose physiological adaptations allow growth to large sub-surface peaks at preferred depths. These sub-surface maxima can be upwelled to the water surface, in a manner controlled by thermal stability and vertical shear, and horizontally transported to give large variations in horizontal distribution.At all latitudes diel stability cycles in surface waters can affect physiological properties important for growth, and in some circumstances can dominate the phytoplankton dynamics and distribution.Such short-term stability events merge with longer-term (e.g. annual) events with no conceptual distinction. A modern way to integrate this continuity is by scaling using spectral analysis of cyclicity. This allows biological variables (algal biomass, numbers, production) to be stochastically related to indices of stability (e.g. Brunt-Väisälä frequency).     

Effects of acidic pH and phytoplankton on survival and condition of Bosmina longirostris and Daphnia pulex

The effects of pH, algal composition and algal biomass on abundance, size, reproduction and condition of Daphnia pulex and Bosmina longirostris were tested in a field experiment using water and natural phytoplankton assemblages from a circumneutral (pH 6.43) and a moderately acidic (pH 5.75) lake in south-central Ontario. Both species were affected by pH and phytoplankton composition, with decreased egg production, lipid reserves, body size or abundance in treatments containing algae and/or water from the more acidic lake compared to treatments containing water and phytoplankton from the circumneutral lake. This result was unexpected for Bosmina, which often increases in relative and/or absolute abundance in acidified lakes. The negative effect of acidic conditions on Bosmina suggests that the population increase observed in most acidified lakes is not due to a positive response to low pH or ambient phytoplankton, but to altered biotic interactions possibly involving reduced competition.     

Palaeoenvironmental significance of the green alga Botryococcus in the lacustrine rotliegend (upper carboniferous ‐ lower permian)

The green alga Botryococcus is an important component of the phytoplankton in lake sediments from the Rotliegend of Central Europe. The first microscopic fossils from the Saar‐Nahe Basin that can be assigned to this genus are described and illustrated here. Their distribution at various stratigraphic levels shows that the primary production of the lakes was at least partially controlled by these green algae. The frequency of fossils in the sediments is correlated with grain size, which varied with the depositional environment. Their abundance is greater in sediments deposited in shallow water, especially in small lakes and in the littoral environments of larger lakes. Sediments of deep‐water lake bottoms contain only minor amounts of algal remains. The abundance of kerogen originating from phytoplankton and occurrences of Botryococcus fossils are correlated in these lake deposits.     

Can overwintering versus diapausing strategy in <Emphasis Type="Italic">Daphnia</Emphasis> determine match–mismatch events in zooplankton–algae interactions?

Mismatches between predator and prey due to climate change have now been documented for a number of systems. Ultimately, a mismatch may have far-reaching consequences for ecosystem functioning as decoupling of trophic relationships results in trophic cascades. Here, we examine the potential for climate change induced mismatches between zooplankton and algae during spring succession, with a focus on Daphnia and its algal food. Whereas the development of an overwintering population of daphnids may parallel shifts in phytoplankton phenology due to climate warming, changes in the photoperiod–temperature interaction may cause the emerging population of daphnids to hatch too late and mismatch their phytoplankton prey. A decoupling of the trophic relationship between the keystone herbivore Daphnia and its algal prey can result in the absence of a spring clear water phase. We extended an existing minimal model of seasonal dynamics of Daphnia and algae and varied the way the Daphnia population is started in spring, i.e., from free swimming individuals or from hatching resting eggs. Our model results show that temperature affects the timing of peak abundance in Daphnia and algae, and subsequently the timing of the clear water phase. When a population is started from a small inoculum of hatching resting eggs, extreme climate warming (+6°C) results in a decoupling of trophic relationships and the clear water phase fails to occur. In the other scenarios, the trophic relationships between Daphnia and its algal food source remain intact. Analysis of 36 temperate lakes showed that shallow lakes have a higher potential for climate induced match–mismatches, as the probability of active overwintering daphnids decreases with lake depth. Future research should point out whether lake depth is a direct causal factor in determining the presence of active overwintering daphnids or merely indicative for underlying causal factors such as fish predation and macrophyte cover. Priority program of the German Research Foundation—contribution 5.     

Distribution and Diversity of Cyanobacteria and Eukaryotic Algae in Qinghai–Tibetan Lakes

Cyanobacteria and eukaryotic algae are important primary producers in a variety of environments, yet their distribution and response to environmental change in saline lakes are poorly understood. In this study, the community structure of cyanobacteria and eukaryotic algae in the water and surface sediments of six lakes and one river on the Qinghai–Tibetan Plateau were investigated with the 23S rRNA gene pyrosequencing approach. Our results showed that salinity was the major factor controlling the algal community composition in these aquatic water bodies and the community structures of water and surface sediment samples grouped according to salinity. In subsaline–mesosaline lakes (salinity: 0.5–50 g L^?1), Cyanobacteria (Cyanobium, Synechococcus) were highly abundant, while in hypersaline lakes (salinity: >50 g L^?1) eukaryotic algae including Chlorophyta (Chlorella, Dunaliella), Bacillariophyta (Fistulifera), Streptophyta (Chara), and Dinophyceae (Kryptoperidinium foliaceum) were the major members of the community. The relative abundance ratio of cyanobacteria to eukaryotic algae was significantly correlated with salinity. The algae detected in Qinghai–Tibetan lakes exhibited a broader salinity range than previously known, which may be a result of a gradual adaptation to the slow evolution of these lakes. In addition, the algal community structure was similar between water and surface sediment of the same lake, suggesting that sediment algal community was derived from water column.     

Effects of sediment resuspension on phytoplankton production: teasing apart the influences of light, nutrients and algal entrainment

1. Wind‐induced sediment resuspension can affect planktonic primary productivity by influencing light penetration and nutrient availability, and by contributing meroplankton (algae resuspended from the lake bed) to the water column. We established relationships between sediment resuspension, light and nutrient availability to phytoplankton in a shallow lake on four occasions. 2. The effects of additions of surficial sediments and nutrients on the productivity of phytoplankton communities were measured in 300 mL gas‐tight bottles attached to rotating plankton wheels and exposed to a light gradient, in 24 h incubations at in situ temperatures. 3. While sediment resuspension always increased primary productivity, resuspension released phytoplankton from nutrient limitation in only two of the four experiments because the amount of available nitrogen and phosphorus entrained from the sediments was small compared with typical baseline levels in the water column. In contrast, chlorophyll a entrainment was substantial compared with baseline water column concentrations and the contribution of meroplankton to primary production was important at times, especially when seasonal irradiance in the lake was high. 4. Comparison of the in situ light climate with the threshold of light‐limitation of the phytoplankton indicated that phytoplankton in the lake were only likely to be light‐limited at times of extreme turbidity (e.g. >200 nephelometric turbidity units), particularly when these occur in winter. Therefore, resuspension influenced phytoplankton production mainly via effects on available nutrients and by entraining algae. The importance of each of these varied in time. 5. The partitioning of primary productivity between the water column and sediments in shallow lakes greatly influences the outcome of resuspension events for water column primary productivity.     

Vertical and seasonal variation of phytoplankton photosynthesis in a brown-water lake with winter ice cover

SUMMARY. Unlike previously studied lakes with prolonged winter ice and snow cover, Lake Paajarvi, southern Finland, has a high humus content and consequently differs in both the quantity and quality of light penetration into its waters. Moreover, the range of temperature fluctuation and the degree of development of thermal stratification are greater in Paajarvi, and this increased environmental heterogeneity apparently stimulates diversity in the phytoplankton community, especially in the seasonal succession of species. Differences in the photosynthetic capacity of algae from different depths in the water column were not great. This is attributed to the extremely shallow euphotic zone, algae circulating freely through the steep light gradient and sedimenting rapidly once they pass through the thermocline into the hypolimnion. It is suggested that 'adaptation' of phytoplankton to the great seasonal changes in irradiance is achieved largely by successive growths of different species in the community, and that the adaptations and vertical migrations by individual algal species, which have been reported from polar and high alpine lakes, may be of secondary importance in Pääjärvi. The species successions in Pääjärvi produce changes in the pigment content of algae similar to those reported from polar and high alpine lakes, confirming that change in pigmentation is an important mechanism in light adaptation, whether at community or individual level. Algal pigment content was particularly high at the end of the long period of winter ice cover, indicating a degree of adaptation to the prolonged low-light conditions, which produced the extremely high photosynthetic capacities measured at this time. However, phytoplankton production at any irradiance was primarily determined by biomass.     

Seasonal succession of the phytoplankton in the upper Mississippi River

Species composition and seasonal succession of the phytoplankton were investigated on the upper Mississippi River at Prairie Island, Minnesota, U.S.A. Both the numbers and volume of individual species were enumerated based on cell counts with an inverted microscope. A succession similar to algal succession in the local lakes occurred. The diatoms were dominant during the spring and fall and blue-green algae were dominant during the summer. The algal concentrations have increased up to 40 fold the concentrations of the 1920's, since the installation of locks and dams. The maximum freshweight standing crop was 4 mg · l^–1 in 1928 (Reinhard 1931), 13 mg · l^–1 in 1975 a wet year, and 47 mg · l^–1 in 1976, a relatively dry year with minimal current discharge. The diatoms varied from 36–99%, the blue-green algae from 0–44% and the cryptómonads from 0–50% of the total standing crop. The green algae were always present but never above 21% of the biomass. The dominant diatoms in recent years were centric -Stephanodiscus andCyclotella spp. (maximum 50,000 ml^–1). The dominant blue-green algae wereAphanizomenon flos-aquae (L.) Ralfsex Born.et Flahault andOscillatoria agardhii Gomont (maximum 800 ml^–1). These algal species are also present in local lakes. Shannon diversity values indicated greatest diversity of algae during the summer months.     

Seasonal variation in phytoplankton composition and physical-chemical features of the shallow Lake Doïrani,Macedonia, Greece

Phytoplankton species composition, seasonal dynamics and spatial distribution in the shallow Lake Doïrani were studied during the growth season of 1996 along with key physical and chemical variables of the water. Weak thermal stratification developed in the lake during the warm period of 1996. The low N:P ratio suggests that nitrogen was the potential limiting nutrient of phytoplankton in the lake. In the phytoplankton of the lake, Chlorophyceae were the most species-rich group followed by Cyanophyceae. The monthly fluctuations of the total phytoplankton biomass presented high levels of summer algal biomass resembling that of other eutrophic lakes. Dinophyceae was the group most represented in the phytoplankton followed by Cyanophyceae. Diatomophyceae dominated in spring and autumn. Nanoplankton comprised around 90% of the total biomass in early spring and less than 10% in summer. The seasonal dynamics of phytoplankton generally followed the typical pattern outlined for other eutrophic lakes. R-species (small diatoms), dominant in the early phase of succession, were replaced by S-species (Microcystis, Anabaena, Ceratium) in summer. With cooling of the water in September, the biomass of diatoms (R-species) increased. The summer algal maxima consisted of a combination of H and M species associations (sensu Reynolds). Phytoplankton development in 1996 was subject to the combined effect of the thermal regime, the small depth of mixing and the increased sediment-water interactions in the lake, which caused changes in the underwater light conditions and nutrient concentrations.     

Associations of Rotifera in the zooplankton of the lake sources of the White Nile

Plankton samples for rotifers were collected by means of vertical hauls with phytoplankton nets at eight stations on Lake Albert during the course of a year. Similar hauls were taken from Lakes Kyoga, Victoria, George and Edward in October and November. The rotifers found in the samples are listed and some estimates of their abundance and seasonal occurrence in Lake Albert are given. The most important planktonic rotifers are Keratella tropica and several species of Brachionus . Other species may also become locally or temporarily abundant; Lecane bulla becomes numerous in samples taken near vegetation after disturbance by rough weather, or where blue-green algae are abundant.
The associations of rotifers at the stations on Lake Albert and in the other lakes have been compared by means of the Sorensen Index and the index of diversity. The highest diversity is found in situations with a high rate of flow, as at the mouth of the Victoria Nile, where the extra species are non-planktonic forms swept into suspension by the current. This high diversity is associated with low numbers of individuals per unit volume. In Lake Albert rotifers are most consistently present and abundant at the mouth of the River Semliki, where the rate of flow is moderated by a large reed swamp. The middle of Lake Albert is poor in rotifers, and this may be related to the sparseness of planktivorous fish coupled with competitive elimination of the rotifers by larger crustacean zooplankters.
The associations of rotifers in Lakes Kyoga and George are similar, and resemble one another more than they resemble the associations in their neighbouring deeper lakes. The association in Lake Kyoga also resembles the associations found in water of a similar depth at the northern end of Lake Albert.     

Associations of Rotifera in the zooplankton of the lake sources of the White Nile

Plankton samples for rotifers were collected by means of vertical hauls with phytoplankton nets at eight stations on Lake Albert during the course of a year. Similar hauls were taken from Lakes Kyoga, Victoria, George and Edward in October and November. The rotifers found in the samples are listed and some estimates of their abundance and seasonal occurrence in Lake Albert are given. The most important planktonic rotifers are Keratella tropica and several species of Brachionus . Other species may also become locally or temporarily abundant; Lecane bulla becomes numerous in samples taken near vegetation after disturbance by rough weather, or where blue-green algae are abundant.
The associations of rotifers at the stations on Lake Albert and in the other lakes have been compared by means of the Sorensen Index and the index of diversity. The highest diversity is found in situations with a high rate of flow, as at the mouth of the Victoria Nile, where the extra species are non-planktonic forms swept into suspension by the current. This high diversity is associated with low numbers of individuals per unit volume. In Lake Albert rotifers are most consistently present and abundant at the mouth of the River Semliki, where the rate of flow is moderated by a large reed swamp. The middle of Lake Albert is poor in rotifers, and this may be related to the sparseness of planktivorous fish coupled with competitive elimination of the rotifers by larger crustacean zooplankters.
The associations of rotifers in Lakes Kyoga and George are similar, and resemble one another more than they resemble the associations in their neighbouring deeper lakes. The association in Lake Kyoga also resembles the associations found in water of a similar depth at the northern end of Lake Albert.     

Seasonal variations in PCR-DGGE fingerprinted viruses infecting phytoplankton in large and deep peri-alpine lakes

Double-stranded DNA viruses infecting eukaryotic algae (e.g., phycodnaviruses) and cyanobacteria (e.g., cyanophages) are now recognized as widespread and ubiquitous in aquatic environments. However, both the diversity and functional roles of these viruses in fresh waters are still poorly understood. We conducted a year-long study in 2011 of the community structure of planktonic virus groups in the upper lit layer of two important freshwater natural ecosystems in France, Lake Annecy (oligotrophic) and Lake Bourget (oligo-mesotrophic). Using PCR-DGGE to target a number of different structural and functional signature genes, i.e.,g20, g23, psbA, polB, and mcp, the phytoplankton viruses were shown to display temporal and spatial variability. There were marked seasonal changes in community structure for all viral groups in Lake Bourget, but only for T4-like myoviruses and psbA-containing cyanophages in Lake Annecy. The multivariate statistical analyses revealed that (1) various environmental factors can directly or indirectly explain the community structure observed for each phytoplankton viral group, and (2) temporal patterns of T4-like myovirus community structure were similar between the two lakes. In general, our results (1) suggest that the observed algal virus patterns were associated with significant shifts in phytoplankton biomass and/or structure, which in turn were shaped by the abiotic environment, and (2) support the Bank model proposed by Breitbart and Rohwer (Trends Microbiol 13:278–284, 2005). This study provides new evidence that freshwater lakes contain a significant diversity of algal viruses, and that the distribution of these viruses strongly mirrors that of their hosts.     

Relationship between epipelon,epiphyton and phytoplankton in two limnological phases in a shallow tropical reservoir with high Nymphaea coverage

Macrophytes and phytoplankton are recognized as having roles in determining alternative stable states in shallow lakes and reservoirs, while the role of periphyton has been poorly investigated. Temporal and spatial variation of phytoplankton, epipelon and epiphyton was examined in a shallow reservoir with high abundance of aquatic macrophytes. The relationships between algae communities and abiotic factors, macrophyte coverage and zooplankton density were also analyzed. Monthly sampling was performed in three zones of the depth gradient of the reservoir. Two phases of algal dominance were found: a phytoplankton phase and epipelon phase. The phase of phytoplankton dominance was characterized by high macrophyte coverage. Rotifera was the dominant zooplankton group in all the zones. Flagellate algae were dominant in phytoplankton, epipelon and epiphyton. Macrophyte coverage was found to be a predictor for algal biomass. Changes in biomass and species composition were associated with macrophyte cover variation, mainly the Nymphaea. In addition to the abiotic factors, the macrophyte coverage was a determining factor for changes to the algal community, contributing to the alternation between dominance phases of phytoplankton and epipelon. The macrophyte–phytoplankton–periphyton relationship needs to be further known in shallow reservoirs, especially the role of epipelon as an alternate stable state.