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1.
Natural decay resistance of teak wood grown in home-garden forestry and the factors influencing decay resistance were determined in comparison with that of a typical forest plantation. Accelerated laboratory tests were conducted on 1800 wood samples drawn from 15 trees of three planted sites. Analysis of variance based on a univariate mixed model showed that planted site, fungal species, and their interaction terms were important sources of variation in decay resistance. With increasing decay resistance from centre to periphery of the heartwood, radial position was a critical factor and the interaction effect of fungal species × radial position was significant in influencing the durability. No significant differences were found in decay resistance either between the opposite radii or due to the various possible interaction terms of radii with the site, fungal species and radial position. There were significant differences in decay resistance against brown-rot fungi between wet and dry sites of home-garden teak although differences against white-rot fungi were non-significant among the three planted sites. Polyporus palustris was the more aggressive brown-rot fungus than Gloeophyllum trabeum. The higher susceptibility of wet site home-garden teak to brown-rot decay was associated with a paler colour of the wood and lower extractive content.  相似文献   

2.
Abstract. Since many wood‐living forest species are influenced by the dynamics of coarse woody debris (CWD), information about the spatial pattern of CWD under natural conditions is essential to understand species distributions. In this study we examined the spatial pattern of downed logs and wood‐decaying fungi in an old‐growth boreal Picea abies forest in northwestern Sweden that is governed by gap‐phase dynamics. The spatial pattern of wood‐decaying fungi was studied to draw conclusions about species dispersal abilities. A total of 684 logs with a diameter > 10 cm were mapped and analysed with Ripley's K‐function. The distribution of all logs taken together displayed a significant aggregated pattern up to 45 m. The different decay stages also deviated from random expectations. Fairly fresh logs and logs in the middle decay stage were clumped up to about 25 and 35 m respectively, and late decayed logs aggregated up to 95 m. Logs with diameters from 10–29 cm were aggregated up to 25 m, whereas logs ≥30 cm diameter were randomly distributed. The result suggests that gap‐dynamics do have an impact on the spatial pattern of the CWD, creating fine‐scale clumping. The random distribution of large logs may result from the slightly regular spacing of large living trees. The spatial patterns of 16 species (n > 20) of wood‐decaying fungi were analysed with Ripley's K‐function. Three patterns were aggregated, for Gloeophyllum sepiarium, Coniophora olivacea and Vesiculomyces citrinus. These results indicate that the distribution of most species at the stand level is generally not influenced by dispersal limitations.  相似文献   

3.
A prevailing paradigm in forest ecology is that wood‐boring beetles facilitate wood decay and carbon cycling, but empirical tests have yielded mixed results. We experimentally determined the effects of wood borers on fungal community assembly and wood decay within pine trunks in the southeastern United States. Pine trunks were made either beetle‐accessible or inaccessible. Fungal communities were compared using culturing and high‐throughput amplicon sequencing (HTAS) of DNA and RNA. Prior to beetle infestation, living pines had diverse fungal endophyte communities. Endophytes were displaced by beetle‐associated fungi in beetle‐accessible trees, whereas some endophytes persisted as saprotrophs in beetle‐excluded trees. Beetles increased fungal diversity several fold. Over forty taxa of Ascomycota were significantly associated with beetles, but beetles were not consistently associated with any known wood‐decaying fungi. Instead, increasing ambrosia beetle infestations caused reduced decay, consistent with previous in vitro experiments that showed beetle‐associated fungi reduce decay rates by competing with decay fungi. No effect of bark‐inhabiting beetles on decay was detected. Platypodines carried significantly more fungal taxa than scolytines. Molecular results were validated by synthetic and biological mock communities and were consistent across methodologies. RNA sequencing confirmed that beetle‐associated fungi were biologically active in the wood. Metabarcode sequencing of the LSU/28S marker recovered important fungal symbionts that were missed by ITS2, though community‐level effects were similar between markers. In contrast to the current paradigm, our results indicate ambrosia beetles introduce diverse fungal communities that do not extensively decay wood, but instead reduce decay rates by competing with wood decay fungi.  相似文献   

4.
Abundance and diversity of fungi in naturally formed knots of Pinus sylvestris affected by Porodaedalea pini were investigated. Samples were taken from trees that were (i) affected, with internal heartwood decay and no conks, (ii) affected, with internal heartwood decay and conks and (iii) controls. The Illumina sequencing technology was used for amplification of DNA, sequencing and analysis. In total, 566,279 raw sequences were obtained from six samples. Sequences included 74% of culturable and 8.4% of non‐culturable fungi and 17.6% of organisms with no reference sequences in NCBI. Abundance of organisms in knotwood, measured as number of OTUs, ranged from 36,272 (29,506 for fungi) to 178,535 (177,484 for fungi) and differed significantly between two trees in a stand and between stands. The highest and lowest average number of fungal OTUs occurred in infected trees with no conks and in trees with conks, respectively. Number of taxa ranged from 171 to 415 and often differed significantly between two trees in one stand and between stands. Greatest diversity occurred in control trees. The number of fungal taxa shared by two trees in one stand was 67–152 and that shared by two stands was 51–141. The majority of fungi were Ascomycota. Those most common in pines affected by P. pini were Coniochaeta hoffmannii and Cfodinicola (19.65%–59.92%). Infundichalara microchona, Leotiomycetes spp. and Rhinocladiella atrovirens were also present. Another common species, Lecanora conizaeoides, occurred most often in control trees (0.30%–8.82%). Porodaedalea pini was detected only sporadically. Non‐culturable fungi were most frequent in the control trees. The greater average abundance and smaller average diversity of fungi in knots of trees infected by P. pini suggest that the pathogen successfully competes with some fungal species and does not inhibit the growth of survivors. Some fungi detected may contribute to production of natural biocides.  相似文献   

5.
Some lignivorous hymenomycete fungi are capable of causing both cankers and decay in stemwood of adult trees. Recently in Tuscany (Italy), Platanus x acerifolia trees were found colonized by Sarcodontia pachydon (Polyporales, Meruliaceae), a fungus associated with white rot and stem cankers on different host tree species. Because the relationship S. pachyodon‐plane‐tree was only preliminary studied, we decided to investigate whether isolates obtained from this host are distinct from those commonly collected from oaks. For this purpose, isolates obtained from plane‐tree and from holm oak (Quercus ilex) were compared by in vitro test and molecular markers. Results showed that fungal isolates did not differ in growth nor in wood degradation, also molecular tests revealed relative similarity among fungal samples.  相似文献   

6.
Non-permineralized or mummified ancient wood found within proglacial soil near the ad Astra Ice Cap (81°N, 76°W), Ellesmere Island, Canada was investigated to ascertain the identification of the trees, current morphological and chemical characteristics of the woods and the fungi within them. These woods, identified as Betula, Larix, Picea and Pinus, were found with varying states of physical and chemical degradation. Modern microbial decomposition caused by soft rot fungi was evident and rDNA sequencing of fungi obtained from the samples revealed several species including Cadophora sp., Exophiala sp., Phialocephala sp., as well as others. Analytical 13C-labeled tetramethylammonium hydroxide thermochemolysis showed the lignin from the ancient wood was in a high degree of preservation with minor side chain alteration and little to no demethylation or ring hydroxylation. The exposure of these ancient woods to the young soils, where woody debris is not usually prevalent, provides carbon and nutrients into the polar environment that are captured and utilized by unique decay fungi at this Arctic site.  相似文献   

7.
Abstract The polypores (Aphyllophorales s.l., Basidiomycota) are very effective wood decayers. Different species differ in their capacity to decay wood; therefore, many functionally different species can be found decaying different substrate conditions (decay stages and log diameter). This study aimed to describe the structure of the wood‐decay polypore communities that occur on different states of wood of the Andean alder (Alnus acuminata) within Argentina and to identify groups of polypore species that share the same substrate condition, and thus might have a similar functional role in the decay processes. We found 16 polypore species, among which Trametes versicolor, Bjerkandera adusta and Trametes cubensis were dominant species, showing the highest relative frequency in alder wood. Species richness was lower on trunks of living trees and higher on dead branches. Based on preferential occurrence on different wood conditions, a cluster analysis distinguished three groups, each of them containing one of the three dominant species. This corresponds to the situation of other groups of organisms, where each functional type consists of a dominant species that accounts for most of the ‘function’ and several subordinate species with similar functions. Albeit preliminary, our results provide a formal classification of wood‐decay fungi into functional types.  相似文献   

8.
Aims: To predict the risk factors for building infestation by Serpula lacrymans, which is one of the most destructive fungi causing timber decay in buildings. Methods and Results: The growth rate was assessed on malt extract agar media at temperatures between 1·5 and 45°C, at water activity (aw) over the range of 0·800–0·993 and at pH ranges from 1·5 to 11·0. The radial growth rate (μ) and the lag phase (λ) were estimated from the radial growth kinetics via the plots radius vs time. These parameters were then modelled as a function of the environmental factors tested. Models derived from the cardinal model (CM) were used to fit the experimental data and allowed an estimation of the optimal and limit values for fungal growth. Optimal growth rate occurred at 20°C, at high aw level (0·993) and at a pH range between 4·0 and 6·0. The strain effect on the temperature parameters was further evaluated using 14 strains of S. lacrymans. The robustness of the temperature model was validated on data sets measured in two different wood‐based media (Quercus robur L. and Picea abies). Conclusions: The two‐step procedure of exponential model with latency followed by the CM with inflection gives reliable predictions for the growth conditions of a filamentous fungus in our study. The procedure was validated for the study of abiotic factors on the growth rate of S. lacrymans. Significance and Impact of the Study: This work describes the usefulness of evaluating the effect of physico‐chemical factors on fungal growth in predictive building mycology. Consequently, the developed mathematical models for predicting fungal growth on a macroscopic scale can be used as a tool for risk assessment of timber decay in buildings.  相似文献   

9.
The present study investigated the relationship between time since death and the morphological characteristics of fallen dead trees in a Nothofagus betuloides forest stand located on the island of Navarino (Chile). In this unmanaged forest, there were 399 m3 ha?1 of dead wood, which represented about half of the living tree volume. At the investigation site, 18 living trees were selected and increment cores were collected from them to build master ring‐width chronologies. Cross sections were also collected from 48 fallen dead trees. The samples collected were then assigned to observable decay classes and their death date was determined dendrochronologically. Cross‐dating techniques were used and it was found that the fallen dead trees cross‐dated significantly with standard chronologies. A year of death was successfully determined for 75% of the sampled fallen dead trees. However, this study demonstrated that, in the standard classification, the transition rate from one class of decay to another was highly variable. Furthermore, the inconsistencies found in the decay rates of the fallen dead trees demonstrated that the existing decay classification schemes were unsuitable for this type of forest stand and that the relationship between qualitatively assessed decay classes and the time since death of trees in this extreme environment was rather weak. In addition, the analysis of the time since death, in this old growth forest, was indicative of the persistence of dead wood on the forest floor in austral cold ecosystems and of its contribution to long‐term carbon storage.  相似文献   

10.
The internal transcribed spacer (ITS) region of nuclear ribosomal DNA is a common marker not only for the molecular identification of different taxa and strains, but also for the analysis of population structure of wild microparasite communities. Importantly, the multicopy nature of this region allows the amplification of low‐quantity samples of the target DNA, a common problem in studies on unicellular, unculturable microparasites. We analysed ITS sequences from the protozoan parasite Caullerya mesnili (class Ichthyosporea) infecting waterflea (Daphnia) hosts, across several host population samples. We showed that analysing representative ITS‐types [as identified by statistical parsimony network analysis (SPN)] is a suitable method to address relevant polymorphism. The spatial patterns were consistent regardless of whether parasite DNA was extracted from individual hosts or pooled host samples. Remarkably, the efficiency in detecting different sequence types was even higher after sample pooling. As shown by simulations, an easily manageable number of sequences from pooled DNA samples are sufficient to resolve the spatial population structure in this system. In summary, the ITS region analysed from pooled DNA samples can provide valuable insights into the spatial and temporal dynamics of microparasites. Moreover, the application of SPN analysis is a good alternative to the well‐established neighbour‐joining method (NJ) for the identification of representative ITS‐types. SPN can even outperform NJ by joining most of the singleton sequences to representative sequence clusters.  相似文献   

11.
Aims: To determine incidence and levels of ochratoxin A (OTA) in California raisins and to isolate and characterize OTA‐producing fungi from California raisin vineyard populations. Methods and Results: Forty raisin clusters sampled from four California vineyards in the San Joaquin Valley were analysed for OTA content using immunoaffinity and HPLC methods. OTA was detected in 93% of the samples, at levels from 0·06 to 11·4 ng g?1. From these raisin samples, a total of 400 strains of Aspergillus were isolated and analysed for OTA production. Twelve isolates (3%), from five raisin samples, produced OTA. These isolates were identified as Aspergillus carbonarius, based on morphological characteristics and multilocus sequence analysis. Levels of OTA produced by these isolates on raisin agar ranged from 0·9 to 15 μg g?1. Conclusions: OTA is a common contaminant of raisin vineyards, but average levels are much lower than EU regulatory limits for dried fruit. The primary species responsible for OTA contamination in California raisins is A. carbonarius. Significance and Impact of the Study: This study illustrates that low‐level OTA contamination of raisins occurs in California and that ecological studies of A. carbonarius within the Aspergillus section Nigri population on raisins are warranted to monitor ochratoxigenic potential of the crop.  相似文献   

12.
Dendrogeomorphologic approaches enable annual absolute dating of various potentially hazardous geomorphic processes. This study tested the dating precision of three commonly used dendrogeomorphic approaches used for the extraction of geomorphic signals from the tree ring series of disturbed trees. The first approach is based on the onset of reaction wood occurrence, and the other two approaches are based on the detection of abrupt changes in tree ring eccentricity. Nine 165 cm long stems of maximally 27 year old Norway spruces (Picea abies (L.) Karst.) growing on unstable slope affected by mass movement events of known age were analysed. Several sampling directions on stems were analysed to reveal the best sampling strategy for each tested approach. The relationships between stem curvature and the dating precision of the approaches were also analysed. The results of dating precision showed crucial differences between the tested approaches. Tree stem curvature did not influence dating precision. Overall, we concluded that the approaches based on eccentric increments are less precise than those based on reaction wood analysis when juvenile P. abies trees that grow on landslide slope are sampled. The importance of this study is in providing new insight into dating precision by analysing the whole tree stems of trees influenced by mass movements. This is unique since the approaches based on eccentricity increments have not been previously tested in such a detail.  相似文献   

13.
This paper discusses the moisture content of sound and decayed Corsican pine (Pinus nigra) after modification with isocyanates {n-butyl isocyanate (BuNCO) and 1,6-diisocyanatehexane (HDI)} at specified intervals of weight percent gain (WPG). The main effects of decay fungi (brown and white rot) and levels of modification (WPG) on moisture contents of modified samples are also examined. Corsican pine reacted with isocyanates enhanced the hydrophobic (restrained water) nature of wood. The equilibrium moisture content of chemically modified wood decreases progressively with increasing WPG. Basidiomycete decay tests demonstrated protection by chemical modification. Wood moisture contents after soil block testing are significantly influenced by decay fungi and by the extent of reaction (WPG). Moisture uptake and susceptibility to decay of modified wood are higher when exposed to Coniophora puteana than other decay fungi. Corsican pine cross-linked by reaction with HDI is less susceptible to decay and is more hydrophobic than samples reacted with the single-site reactant BuNCO at comparable WPG.  相似文献   

14.
Aims: To detect the possible coexistence of striped jack nervous necrosis virus (SJNNV) and red‐spotted grouper nervous necrosis virus (RGNNV) genotypes in a single fish, a methodology based on the combination of PCR amplification and blot hybridization has been developed and applied in this study. Methods and Results: The degenerate primers designed for the PCR procedure target the T4 region within the capsid gene, resulting in the amplification of both genotypes. The subsequent hybridization of these amplification products with two different specific digoxigenin‐labelled probes resulted in the identification of both genotypes separately. The application of the RT‐PCR protocol to analyse blood samples from asymptomatic wild meagre (Argyrosomus regius) specimens has shown a 46·87% of viral nervous necrosis virus carriers. The combination of RT‐PCR and blot hybridization increases the detection rate up to 90·62%, and, in addition, it has shown the coexistence of both genotypes in 18 out of the 32 specimens analysed (56·25%). Conclusions: This study reports the coexistence of betanodaviruses belonging to two different genotypes (SJNNV and RGNNV) in wild fish specimens. Significance and Impact of the Study: This is the first report demonstrating the presence of SJNNV and RGNNV genotypes in the same specimen. This study also demonstrates a carrier state in this fish species for the first time.  相似文献   

15.
Stable isotopes in tree rings have widely been used for palaeoclimate reconstructions since tree rings record climatic information at annual resolution. However, various wood components or different parts of an annual tree-ring may differ in their isotopic compositions. Thus, sample preparation and subsequent laboratory analysis are crucial for the isotopic signal retained in the final tree-ring isotope series used for climate reconstruction and must therefore be considered for the interpretation of isotope–climate relationships. This study focuses on wood of Corsican Pine trees (Pinus nigra ssp. laricio) as this tree species allows to reconstruct the long-term climate evolution in the western Mediterranean. In a pilot study, we concentrated on methodological issues of sample preparation techniques in order to evaluate isotope records measured on pooled whole tree-ring cellulose and whole tree-ring bulk wood samples. We analysed 80-year long carbon and oxygen chronologies of Corsican Pine trees growing near the upper tree line on Corsica. Carbon and oxygen isotope records of whole tree-ring bulk wood and whole tree-ring cellulose from a pooled sample of 5 trees were correlated with the climate parameters monthly precipitation, temperature and the self-calibrating Palmer Drought Severity Index (sc-PDSI). Results show that the offsets in carbon and oxygen isotopes of bulk wood and cellulose are not constant over time. Both isotopes correlate with climate parameters from late winter and summer. The carbon and oxygen isotope ratios of cellulose are more sensitive to climatic variables than those of bulk wood. The results of this study imply that extraction of cellulose is a pre-requisite for the reconstruction of high-resolution climate records from stable isotope series of P. nigra ssp. laricio.  相似文献   

16.
AIMS: The goal of this research was the development of a PCR-based assay to identify important decay fungi from wood of hardwood tree species in northern temperate regions. METHODS AND RESULTS: Eleven taxon-specific primers were designed for PCR amplification of either nuclear or mitochondrial ribosomal DNA regions of Armillaria spp., Ganoderma spp., Hericium spp., Hypoxylon thouarsianum var. thouarsianum, Inonotus/Phellinus-group, Laetiporus spp., Perenniporia fraxinea, Pleurotus spp., Schizophyllum spp., Stereum spp. and Trametes spp. Multiplex PCR reactions were developed and optimized to detect fungal DNA and identify each taxon with a sensitivity of at least 1 pg of target DNA in the template. This assay correctly identified the agents of decay in 82% of tested wood samples. CONCLUSIONS: The development and optimization of multiplex PCRs allowed for reliable identification of wood rotting fungi directly from wood. SIGNIFICANCE AND IMPACT OF THE STUDY: Early detection of wood decay fungi is crucial for assessment of tree stability in urban landscapes. Furthermore, this method may prove useful for prediction of the severity and the evolution of decay in standing trees.  相似文献   

17.
Abstract. This study reports temporal (based on cross‐dated dead trees) and spatial patterns of availability of coarse woody debris (CWD) from Picea abies in a Swedish boreal landscape with discrete old‐growth forest patches in a wetland matrix. Data were collected from 29 patches ranging in size from 0.3 to 28 ha. A total of 897 dead trees with a minimum diameter of > 15 cm occurred on the 7.2 ha area analysed. The year of death was established for 50% of these trees. CWD volume ranged from 17 to 65 m3/ha for downed logs and from 0.5 to 13 m3/ha for standing snags. CWD of all decay stages and diameter classes occurred abundantly and the probability of finding logs of all decay stages and sizes was very high at the scale of single hectares. Tree mortality differed among 5 yr periods. However, during the last 50 yr no 5 yr period produced less than 3 logs/ha. Decay rates were highly variable among different logs. Logs with soft wood and some wood pieces lost (decay stage 5) died ca. 34 years ago. This suggests a fairly rapid decay in this northern forest. The data indicate a high and continuous availability of CWD of all types. It is likely, therefore, that selection pressures for efficient dispersal among CWD dependent species may not be very high. Consequently, species with narrow habitat demands and/or low dispersal ability may have evolved and this may contribute to the decrease of certain species in the managed landscape.  相似文献   

18.
The effect of two stilbene compounds, pinosylvin and resveratrol, on the growth of several fungi was evaluated in plate tests. Wood decay tests were carried out with birch and aspen samples impregnated with the two stilbenes. In plate experiments, resveratrol had an enhancing effect on growth at concentrations where pinosylvin was already enough to prevent the growth of most fungi studied. Pinosylvin impregnated at 0.2% (w/w) concentration significantly reduced the decay caused by all fungi except Phellinus tremulae. In contrast, a resveratrol content of 0.8%, did not protect the wood from decay. A pinosylvin-synthase-encoding gene from Pinus sylvestris was transferred into aspen (Populus tremula) and two hybrid aspen clones (Populus tremula×tremuloides) by Agrobacterium tumefaciens-mediated transformation. Transgenic plants accumulated pinosylvin synthase-specific mRNA and showed stilbene synthase enzyme activity in vitro. Transgenic aspen line H4 showed increased resistance to Phellinus tremulae, while two hybrid aspen transformants decayed faster than the control trees. However, we were unable to detect the accumulation of stilbenes in the transgenic plantlets.Communicated by P. Debergh  相似文献   

19.
Dead wood is a habitat for many insects and other small animals, some of which may be rare or endangered and in need of effective protection. In this paper, saproxylic beetle assemblages associated with different host trees in the subtropical forests in southwestern China were investigated. A total of 277 species (1 439 specimens) in 36 beetle families were collected from 117 dead wood samples, of which 101 samples were identified and respectively belonged to 12 tree genera. The number of saproxylic beetle species varied greatly among logs of different tree genera, with the highest diversity on logs of Juglans. Generally, broad‐leaved trees had a higher richness and abundance of saproxylic species than coniferous trees. Cluster analysis revealed that assemblages from broad‐leaved tree genera were generally similar (except for Betula) and assemblages from coniferous trees formed another distinct cluster. The subsequent indicator analysis proposed that there are different characteristic species for different cluster groups of host tree genera. In our study, log diameter has no positive influence on beetle species density. Conversely, comparisons of individual‐based rarefaction curves suggested that beetle species richness was highest in the small diameter class both in coniferous and broad‐leaved tree genera. With increased wood decay, proportion of habitat specialists (saproxylic beetles living on one tree genus) decreased, whereas proportion of habitat generalists (living on more than three tree genera) increased. The beetle species density was found to be higher in early stages, and decreased in later stages as well. A negative influence of altitude on saproxylic beetle species richness and abundance was detected. It was indicated that different tree genera and altitudes possibly display cross effects in modulating the altitudinal distribution and host preference of the beetles.  相似文献   

20.
Trees in the Garden Route National Park (GRNP) indigenous forests in South Africa are selectively harvested for timber based on criteria that include signs and symptoms induced by wood‐rotting fungi. However, virtually nothing is known regarding the identity and host associations of these macro‐fungi in this natural ecosystem. Surveys were conducted in three harvesting compartments in the GRNP to investigate the taxonomic affiliation and species richness of these fungi on standing and recently harvested trees. Samples were collected from basidiomes on infected trees and tree stumps, and from diseased tissues on symptomatic trees. Phylogenetic analyses using ITS sequences characterized the isolates obtained into 26 Operational Taxonomic Units (OTUs) belonging to 17 genera after clustering the sequences at a 97% identity threshold. Ganoderma (Ganodermataceae) and Inonotus (Hymenochaetaceae) were the most species‐rich genera and the Bloukrans compartment, with 22 OTUs, showed the highest species richness. A fungus (OTU1) affiliated with Ganoderma pfeifferi was the most abundant in the surveyed areas. Its predominance was also evidenced on host trees since it occurred on 15 of the 20 tree species sampled, with Olea capensis subsp. macrocarpa (Oleaceae) being the most colonized host. Given the wide variety of wood‐rotting basidiomycetes revealed by this study and particularly the preponderance of species with pathogenic potential, more attention should be given to better understand their ecological role in this natural ecosystem as well as the effects of logging that may enhance their dissemination or negatively affect their diversity and the health of trees in the region.  相似文献   

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