Motion perception getting better with age?

Older people can discriminate visual motion of large, high-contrast stimuli better than young adults. This surprising result, reported by Betts et al. in this issue of Neuron, suggests weaker center-surround antagonism in senescence, perhaps attributable to age-related reduction in GABA-mediated inhibition.     

The tree of life and the rock of ages: Are we getting better at estimating phylogeny?

In a recent paper,(1) palaeontologist Mike Benton claimed that our ability to reconstruct accurately the tree of Life may not have improved significantly over the last 100 years. This implies that the cladistic and molecular revolutions may have promulgated as much bad "black box" science as rigorous investigation. Benton's assessment was based on the extent to which cladograms (typically constructed with reference only to distributions of character states) convey the same narrative as the geochronological ages of fossil taxa (an independent data set). Fossil record quality varies greatly between major clades, and the palaeontological dating "yardstick" may be more appropriate for some groups than others.     

Perceptual learning: stimulus-specific learning from low-level visual plasticity?

A new study has found that changes in visual cortical processing account for behavioral perceptual learning, supporting the idea that stimulus-specific learning can result from low-level visual plasticity.     

Benchmarking ontologies: bigger or better?

A scientific ontology is a formal representation of knowledge within a domain, typically including central concepts, their properties, and relations. With the rise of computers and high-throughput data collection, ontologies have become essential to data mining and sharing across communities in the biomedical sciences. Powerful approaches exist for testing the internal consistency of an ontology, but not for assessing the fidelity of its domain representation. We introduce a family of metrics that describe the breadth and depth with which an ontology represents its knowledge domain. We then test these metrics using (1) four of the most common medical ontologies with respect to a corpus of medical documents and (2) seven of the most popular English thesauri with respect to three corpora that sample language from medicine, news, and novels. Here we show that our approach captures the quality of ontological representation and guides efforts to narrow the breach between ontology and collective discourse within a domain. Our results also demonstrate key features of medical ontologies, English thesauri, and discourse from different domains. Medical ontologies have a small intersection, as do English thesauri. Moreover, dialects characteristic of distinct domains vary strikingly as many of the same words are used quite differently in medicine, news, and novels. As ontologies are intended to mirror the state of knowledge, our methods to tighten the fit between ontology and domain will increase their relevance for new areas of biomedical science and improve the accuracy and power of inferences computed across them.     

Adaptive significance of play: Are we getting closer?

Life history theory predicts that animals whose activities impose time, energy or survivorship costs at one stage of their lives will subsequently suffer incremental decreases in fitness unless there are compensatory benefits. Play, a widespread activity among juvenile mammals and several orders of birds' appears costly, yet its adaptive significance is poorly understood despite over 15 years of detailed study. Four issues have plagued understanding of the function of play: lack of a consensus on its definition, difficulties in selectively depriving animals of play opportunities and in meeting the challenge of interpreting negative results, paucity of empirical data on the costs of play, and failure to pay sufficient attention to field and naturalistic studies. Despite these problems, sex differences in play and partner preferences of participants now suggest that play serves to improve future adult motor skills in a number of species.     

Membrane simulations: bigger and better?

Molecular dynamics simulations of biological membranes have come of age. Simulations of pure lipid bilayers are extending our understanding of both optimal simulation procedures and the detailed structural dynamics of lipids in these systems. Simulation methods established using simple bilayer-embedded peptides are being extended to a wide range of membrane proteins and membrane protein models, and are beginning to reveal some of the complexities of membrane protein structural dynamics and their relationship to biological function.     

No longer ‘blob-ology': Cryo-EM is getting into molecular details

<正>The structural information of functionally important macromolecular assemblies is a key to molecular biology and is of great interest to structural biologists.Cryo-electron microscopy(cryo-EM),particularly the single particle analysis(SPA),has been regarded as one of the three primary tech-     

Gene regulation: better late than never?

A new study has found that, in Arabidopsis, the paternal copies of many genes are delayed in expression during early seed development. The distribution of the genes and nature of their products suggest that this delayed expression of paternal alleles may be a global phenomenon.     

Cortical plasticity: learning while you sleep?

Sleep has been suggested to facilitate memory consolidation or learning, but there has been little direct evidence of a link between synaptic plasticity and sleep. A recent study suggests a role for sleep in the plastic changes that the visual cortex undergoes in response to occlusion of one eye early in life.     

Is Escherichia coli getting old?

Whether or not bacteria divide symmetrically, the inheritance of cell poles is always asymmetrical. Because each cell carries an old and a new pole, its daughters will not be the same. Tracking poles of cells and measuring their lengths and doubling times in micro-colonies, Stewart et al.1 observed that growth rate diminished in cells inheriting old poles and concluded that these cells are susceptible to aging. Here, their results are compared with studies on the variabilities of length and age at division. It is argued that the decreased growth rate in old pole cells falls within the expected variation and may therefore be sufficiently far from a catastrophe-like cell death through aging.     

Endocannabinoids: losing inhibition to increase learning capacity?

Recent work has implicated endocannabinoids in various forms of synaptic plasticity. In this issue of Neuron, Chevaleyre and Castillo describe a new mechanism whereby a CB1 receptor-mediated LTD of inhibitory synaptic transmission facilitates the subsequent induction of LTP in a narrow band of synapses surrounding a region of potentiated synapses.