首页 | 本学科首页   官方微博 | 高级检索  
相似文献
 共查询到20条相似文献,搜索用时 15 毫秒
1.
In N,N-dimethylformamide (DMF), 1,4,7-tris((S)-2-hydroxy-3-phenylpropyl)-1,4,7-triazacyclononane forms metal complexes, [M(S-thppc9)]+, for which log K (dm3 mol−1)=3.01, 2.65, 2.66, 2.65, 2.42 and 7.59 (all±0.05) where M+=Li+, Na+, K+, Rb+, Cs+ and Ag+, respectively. Variable temperature 13C{1H} NMR spectroscopy shows that the interchange between equivalent forms of a single diastereomer occurs for [Li(S-thppc9)]+ and [Na(S-thppc9)]+ characterised by: k=43±5 and 2900±100 s−1, at 298.2 K, ΔH=22.5±1.6 and 33.8±1.6 kJ mol−1, and ΔS=−133±5 and −59±6 J K−1 mol−1, respectively. Gas phase ab initio modelling shows these complexes and their K+ analogue to preferentially form distorted trigonal prismatic Λ, Δ, and Λ diastereomers, respectively.  相似文献   

2.
In order to examine the effects of coordinated hydroxide ion and free hydroxide ion in configurational conversion of a tetraamine macrocyclic ligand complex, the kinetics of the cis-to-planar interconversion of cis-[Ni(isocyclam)(H2O)2]2+ (isocyclam, 1,4,7,11-tetraazacyclotetradecane) has been studied spectrophotometrically in basic aqueous solution. The interconversion requires the inversion of one sec-NH center of the folded cis-complex to have the planar species. Kinetic data are satisfactorily fitted by the rate law, R = kOH[OH][cis-[Ni(isocyclam)(H2O)2]2+], where kOH = 3.84 × 103 dm3 mol−1 s−1 at 25.0 ± 0.1 °C with I = 0.10 mol dm−3 (NaClO4). The large ΔH, 61.7 ± 3.2 kJ mol−1, and the large positive ΔS, 30.2 ± 10.8 J K−1 mol−1, strongly support a free-base-catalyzed mechanism for the reaction.  相似文献   

3.
Reaction of the five-coordinate trigonal-bipyramidal platinum(II) complex, [Pt(pt)(pp3)](BF4) (pt = 1-propanethiolate, pp3 = tris[2-(diphenylphosphino)ethyl]phosphine), with I in chloroform gave the five-coordinate square-pyramidal complex with a dissociated terminal phosphino group and an apically coordinated iodide ion in equilibrium. The thermodynamic parameters for the equilibrium between the trigonal-bipyramidal and square-pyramidal geometries, [Pt(pt)(pp3)]+ + I ? [PtI(pt) (pp3)], and the kinetic parameters for the chemical exchange were obtained as follows: , ΔH0 = − 10 ± 2.4 kJ mol−1, ΔS0 = − 36 ± 10 J K−1 mol−1, , ΔH = 34 ± 4.7 kJ mol−1, ΔS = − 50 ± 21 J K−1 mol−1. The square-planar trinuclear platinum(II) complex was formed by bridging reaction of one of the terminal phosphino groups of trigonal-bipyramidal [PtCl(pp3)]Cl with trans-[PtCl2(NCC6H5)2] in chloroform. From these facts, ligand substitution reactions of [PtX(pp3)]+ (X = monodentate anion) are expected to proceed via an intermediate with a dissociated phosphino group. The rate constants for the chloro-ligand substitution reactions of [PtCl(pp3)]+ with Br and I in chloroform approached the respective limiting values as concentrations of the entering halide ions are increased. These kinetic results confirmed the preassociation mechanism in which the square pyramidal intermediate with a dissociated phosphino group and an apically coordinated halide ion is present in the rapid pre-equilibrium.  相似文献   

4.
The kinetics of the reduction of by Co(dmgBF2)2(H2O)2 in 0.041 M HNO3/NaNO3 was found to be first-order in both the oxidizing and reducing agents and the second-order rate constant is given by kobs = k1 + k2K[Cl], with k1=1.59 × 106 M−1 s−1and k2K = 1.83 × 108 M−2 s−1, at 25 °C. The term that is first-order in [Cl] is attributed to the formation of an ion-pair between and Cl. For k1, the activation parameters ΔH* and ΔS* are 2.22 ± 0.02 kcal mol−1 and −22.7 ± 0.8 cal mol−1 K−1, respectively. The self-exchange rate constant of k22 ≈ 8.7 × 10−3 M−1 s−1 for was estimated using Marcus theory and the known self-exchange rate constant for .  相似文献   

5.
The kinetics of the complexation of Ni(II) with 1,10-phenanthroline(phen), 4,7-dimethyl-1,10-phenanthroline(dmphen), and 5-nitro-1,10-phenanthroline(NO2phen) in acetonitrile-water mixed solvents of acetonitrile mole fraction xAN = 0, 0.05, 0.1, 0.2 and 0.3 at 288, 293, 298 and 303 K have been studied by stopped-flow method at ionic strength of 1.0 (NaClO4) and pH 7.4. The corresponding activation enthalpy, entropy, and free energy were determined from the observed rate constants. The complexation of Ni(II) with the three ligands has comparable observed rate constants; in pure water the observed rate constants are (×103 dm3 mol−1 s−1) 2.31, 2.57, and 1.38 for phen, dmphen and NO2phen, respectively. The corresponding activation parameters for the three ligands are, however, considerably different; in pure water the ΔHS (kJ mol−1/J K−1 mol−1) are 44.7/−30.2, 19.5/−114.1, and 32.2/−76.9 for phen, dmphen, and NO2phen, respectively. The effects of solvent composition on the kinetics are also markedly different for the three ligands. The ΔH and ΔS showed a minimum at xAN = 0.1 for phen; for dmphen and NO2phen, however, maxima at xAN = 0.2 were observed. Nevertheless, there is an effective enthalpy-entropy compensation for the ΔHS of all the three ligands, demonstrating the significant effects of the changes in solvation and solvent structure on the complexation kinetics. As the rate-determining step of Ni(II) complexation is the dissociation of a water molecule from Ni(II), the solvent and ligand dependencies in the Ni(II) complexation kinetics are ascribed to the change in solvation status of the ligands and the altered solvent structures upon changing solvent composition.  相似文献   

6.
Two isomers of the N,O-coordinated acetylpyrrolyl complex [Ru(PPh3)2(CO)(NC4H3C(O)CH3)H] {cis-N,H (1) and trans-N,H (2)} have been prepared as models for catalytic intermediates in the Murai reaction. Complex 2 isomerises to 1 upon heating via a dissociative pathway (ΔH = 195 ± 41 kJ mol−1; ΔS = 232 ± 62 J mol−1 K−1); the mechanism of this process has been modeled using density functional calculations. Complex 2 displays moderate catalytic activity for the Murai coupling of 2′-methylacetophenone with trimethylvinylsilane, but 1 proved to be catalytically inactive under the same conditions.  相似文献   

7.
α-Amylase from Sorghum bicolor, is reversibly unfolded by chemical denaturants at pH 7.0 in 50 mM Hepes containing 13.6 mM calcium and 15 mM DTT. The isothermal equilibrium unfolding at 27 °C is characterized by two state transition with ΔG (H2O) of 16.5 kJ mol−1 and 22 kJ mol−1, respectively, at pH 4.8 and pH 7.0 for GuHCl and ΔG (H2O) of 25.2 kJ mol−1 at pH 4.8 for urea. The conformational stability indicators such as the change in excess heat capacity (ΔCp), the unfolding enthalpy (Hg) and the temperature at ΔG = 0 (Tg) are 17.9 ± 0.7 kJ mol−1 K−1, 501.2 ± 18.2 kJ mol1 and 337.3 ± 6.9 K at pH 4.8 and 14.3 ± 0.5 kJ mol−1 K−1, 509.3 ± 21.7 kJ mol−1 and 345.4 ± 4.8 K at pH 7.0, respectively. The reactivity of the conserved cysteine residues, during unfolding, indicates that unfolding starts from the ‘B’ domain of the enzyme. The oxidation of cysteine residues, during unfolding, can be prevented by the addition of DTT. The conserved cysteine residues are essential for enzyme activity but not for the secondary and tertiary fold acquired during refolding of the denatured enzyme. The pH dependent stability described by ΔG (H2O) and the effect of salt on urea induced unfolding confirm the role of electrostatic interactions in enzyme stability.  相似文献   

8.
The reaction of [(η7-C7H7)Zr(η5-C5H5)] with two Lewis bases, tetramethylimidazolin-2-ylidene and PMe3, is reported and their stability probed via spectroscopic and theoretical methods. The strongly σ-basic N-heterocyclic carbene forms a stable adduct which has been structurally characterised, whilst the PMe3 ligand coordinates weakly to the metal centre. Variable temperature 31P NMR spectroscopy has been used to determine the activation energy for this process (ΔG = 40.5 ± 1.9 kJ mol−1). DFT calculations have been performed on both complexes and the structures discussed. In addition, the enthalpies for the formation of these compounds have been calculated [ΔH0(Zr-IMe) = −56.3 kJ mol−1; ΔH0(Zr-PMe3) = −2.3 kJ mol−1] and show that the N-heterocyclic carbene forms a thermodynamically much more stable adduct than that with PMe3.  相似文献   

9.
The dissociation kinetics of the europium(III) complex with H8dotp ligand was studied by means of molecular absorption spectroscopy in UV region at ionic strength 3.0 mol dm−3 (Na,H)ClO4 and in temperature region 25-60 °C. Time-resolved laser-induced fluorescence spectroscopy (TRLIFS) was employed in order to determine the number of water molecules in the first coordination sphere of the europium(III) reaction intermediates and the final products. This technique was also utilized to deduce the composition of reaction intermediates in course of dissociation reaction simultaneously with calculation of rate constants and it demonstrates the elucidation of intimate reaction mechanism. The thermodynamic parameters for the formation of kinetic intermediate (ΔH0 = 11 ± 3 kJ mol−1, ΔS0 = 41 ± 11 J K−1 mol−1) and the activation parameters (Ea = 69 ± 8 kJ mol−1, ΔH = 67 ± 8 kJ mol−1, ΔS = −83 ± 24 J K−1 mol−1) for the rate-determining step describing the complex dissociation were determined. The mechanism of proton-assisted reaction was proposed on the basis of the experimental data.  相似文献   

10.
The interaction between CpRuH(dppe) and a series of proton donors (HA) of increasing strength: CFH2CH2OH (MFE), CF3CH2OH (TFE), (CF3)2CHOH (HFIP), p-nitrophenol, CF3COOH and HBF4 has been investigated spectroscopically by variable-temperature IR, UV-Vis, and NMR spectroscopy in solvents of differing polarity (n-hexane, dichloromethane and their mixture). The low-temperature IR study shows the establishment of a hydrogen-bond which involves the hydride ligand as the proton accepting site. The basicity factor Ej for the hydride was found to be 1.39. All techniques indicate that an equilibrium exists between the dihydrogen-bonded complex and the cationic dihydrogen complex, [CpRu(η2-H2)(dppe)]+, the formation of which is shown here for the first time. The proton transfer from HFIP is characterized by ΔH° = −8.1 ± 0.6 kcal mol−1 and ΔS° = −17 ± 3 eu. The activation parameters for the subsequent irreversible isomerization leading to the classical dihydride complex, [CpRu(H)2(dppe)]+, are ΔH = 20.9 ± 0.8 kcal mol−1 and ΔS = 9 ± 3 eu as determined from 1H NMR spectroscopy for protonation by HBF4. Computational results at the DFT/B3PW91 level confirm the experimentally observed hydride basicity increase on descending the Group from iron to ruthenium and also the formation of the non-classical complex as an intermediate, prior to the thermodynamically favored dihydride.  相似文献   

11.
Oxidation of the title complexes with ozone takes place by hydrogen atom, hydride, and electron transfer mechanisms. The reaction with (NH3)4(H2O)RhH2+ is a two electron process, believed to involve hydride transfer with a rate constant k = (2.2 ± 0.2) × 105 M−1 s−1 and an isotope effect kH/kD = 2. The oxidation of (NH3)4(H2O)RhOOH2+ to (NH3)4(H2O)RhOO2+ by an apparent hydrogen atom transfer is quantitative and fast, k = (6.9 ± 0.3) × 103 M−1 s−1, and constitutes a useful route for the preparation of the superoxo complex. The latter is also oxidized by ozone, but more slowly, k = 480 ± 50 M−1 s−1.  相似文献   

12.
The binding affinity of the two substrate–water molecules to the water-oxidizing Mn4CaO5 catalyst in photosystem II core complexes of the extremophilic red alga Cyanidioschyzon merolae was studied in the S2 and S3 states by the exchange of bound 16O-substrate against 18O-labeled water. The rate of this exchange was detected via the membrane-inlet mass spectrometric analysis of flash-induced oxygen evolution. For both redox states a fast and slow phase of water-exchange was resolved at the mixed labeled m/z 34 mass peak: kf = 52 ± 8 s− 1 and ks = 1.9 ± 0.3 s− 1 in the S2 state, and kf = 42 ± 2 s− 1 and kslow = 1.2 ± 0.3 s− 1 in S3, respectively. Overall these exchange rates are similar to those observed previously with preparations of other organisms. The most remarkable finding is a significantly slower exchange at the fast substrate–water site in the S2 state, which confirms beyond doubt that both substrate–water molecules are already bound in the S2 state. This leads to a very small change of the affinity for both the fast and the slowly exchanging substrates during the S2 → S3 transition. Implications for recent models for water-oxidation are briefly discussed.  相似文献   

13.
The ruthenium(II) hexaaqua complex [Ru(H2O)6]2+ reacts with dihydrogen under pressure to give the η2-dihydrogen ruthenium(II) pentaaqua complex [Ru(H2)(H2O)5]2+.The complex was characterized by 1H, 2H and 17O NMR: δH = −7.65 ppm, JHD = 31.2 Hz, δO = −80.4 ppm (trans to H2) and δO = −177.4 ppm (cis to H2).The H-H distance in coordinated dihydrogen was estimated to 0.889 Å from JHD, which is close to the value obtained from DFT calculations (0.940 Å).Kinetic studies were performed by 1H and 2H NMR as well as by UV-Vis spectroscopy, yielding the complex formation rate and equilibrium constants: kf = (1.7 ± 0.2) × 10−3 kg mol−1 s−1 and Keq = 4.0 ± 0.5 mol kg−1.The complex formation rate with dihydrogen is close to values reported for other ligands and thus it is assumed that the reaction with dihydrogen follows the same mechanisn (Id).In deuterated water, one can observe that [Ru(H2)(H2O)5]2+ catalyses the hydrogen exchange between the solvent and the dissolved dihydrogen.A hydride is proposed as the intermediate for this exchange.Using isotope labeling, the rate constant for the hydrogen exchange on the η2-dihydrogen ligand was determined as k1 = (0.24 ± 0.04) × 10−3 s−1.The upper and lower limits of the pKa of the coordinated dihydrogen ligand have been estimated:3 < pKa < 14.  相似文献   

14.
The X-ray crystal structures of two related trans-N2S2 copper macrocycles are reported. One was isolated with the copper in the divalent form and the other with copper in its univalent form affording a valuable insight into the changes of geometry and metrical parameters that occur during redox processes in macrocyclic copper complexes. A variable temperature NMR study of the copper(I) complex is reported, indicative of a chair-boat conformational change within the alkyl chain backbone of the macrocycle. It was possible to extract the relevant kinetic and thermodynamic parameters (ΔG, 57.8 kJ mol−1; ΔH, 52.1 kJ mol−1; ΔS, −19.2 J K−1 mol−1) for this process at 298 K. DFT molecular orbital calculations were used to confirm these observations and to calculate the energy difference (26.2 kJmol−1) between the copper(I) macrocycle in a planar and a distorted tetrahedral disposition.  相似文献   

15.
An early step in the morphogenesis of the double-stranded DNA (dsDNA) bacteriophage HK97 is the assembly of a precursor shell (prohead I) from 420 copies of a 384-residue subunit (gp5). Although formation of prohead I requires direct participation of gp5 residues 2-103 (Δ-domain), this domain is eliminated by viral protease prior to subsequent shell maturation and DNA packaging. The prohead I Δ-domain is thought to resemble a phage scaffolding protein, by virtue of its highly α-helical secondary structure and a tertiary fold that projects inward from the interior surface of the shell. Here, we employ factor analysis of temperature-dependent Raman spectra to characterize the thermostability of the Δ-domain secondary structure and to quantify the thermodynamic parameters of Δ-domain unfolding. The results are compared for the Δ-domain within the prohead I architecture (in situ) and for a recombinantly expressed 111-residue peptide (in vitro). We find that the α-helicity (∼ 70%), median melting temperature (Tm = 58 °C), enthalpy (ΔHm = 50 ± 5 kcal mol− 1), entropy (ΔSm = 150 ± 10 cal mol− 1 K− 1), and average cooperative melting unit (〈nc〉 ∼ 3.5) of the in situ Δ-domain are altered in vitro, indicating specific interdomain interactions within prohead I. Thus, the in vitro Δ-domain, despite an enhanced helical secondary structure (∼ 90% α-helix), exhibits diminished thermostability (Tm = 40 °C; ΔHm = 27 ± 2 kcal mol− 1; ΔSm = 86 ± 6 cal mol− 1 K− 1) and noncooperative unfolding (〈nc〉 ∼ 1) vis-à-vis the in situ Δ-domain. Temperature-dependent Raman markers of subunit side chains, particularly those of Phe and Trp residues, also confirm different local interactions for the in situ and in vitro Δ-domains. The present results clarify the key role of the gp5 Δ-domain in prohead I architecture by providing direct evidence of domain structure stabilization and interdomain interactions within the assembled shell.  相似文献   

16.
To characterize driving forces and driven processes in formation of a large-interface, wrapped protein-DNA complex analogous to the nucleosome, we have investigated the thermodynamics of binding the 34-base pair (bp) H′ DNA sequence to the Escherichia coli DNA-remodeling protein integration host factor (IHF). Isothermal titration calorimetry and fluorescence resonance energy transfer are applied to determine effects of salt concentration [KCl, KF, K glutamate (KGlu)] and of the excluded solute glycine betaine (GB) on the binding thermodynamics at 20 °C. Both the binding constant Kobs and enthalpy ΔH°obs depend strongly on [salt] and anion identity. Formation of the wrapped complex is enthalpy driven, especially at low [salt] (e.g., ΔHoobs = − 20.2 kcal·mol− 1 in 0.04 M KCl). ΔH°obs increases linearly with [salt] with a slope (dΔH°obs/d[salt]), which is much larger in KCl (38 ± 3 kcal·mol− 1 M− 1) than in KF or KGlu (11 ± 2 kcal·mol− 1 M− 1). At 0.33 M [salt], Kobs is approximately 30-fold larger in KGlu or KF than in KCl, and the [salt] derivative SKobs = dlnKobs/dln[salt] is almost twice as large in magnitude in KCl (− 8.8 ± 0.7) as in KF or KGlu (− 4.7 ± 0.6).A novel analysis of the large effects of anion identity on Kobs, SKobs and on ΔH°obs dissects coulombic, Hofmeister, and osmotic contributions to these quantities. This analysis attributes anion-specific differences in Kobs, SKobs, and ΔH°obs to (i) displacement of a large number of water molecules of hydration [estimated to be 1.0(± 0.2) × 103] from the 5340 Å2 of IHF and H′ DNA surface buried in complex formation, and (ii) significant local exclusion of F and Glu from this hydration water, relative to the situation with Cl, which we propose is randomly distributed. To quantify net water release from anionic surface (22% of the surface buried in complexation, mostly from DNA phosphates), we determined the stabilizing effect of GB on Kobs: dlnKobs/d[GB]  = 2.7 ± 0.4 at constant KCl activity, indicating the net release of ca. 150 H2O molecules from anionic surface.  相似文献   

17.
Ferric human serum heme-albumin (heme-HSA) shows a peculiar nuclear magnetic relaxation dispersion (NMRD) behavior that allows to investigate structural and functional properties. Here, we report a thermodynamic analysis of NMRD profiles of heme-HSA between 20 and 60 °C to characterize its hydration. NMRD profiles, all showing two Lorentzian dispersions at 0.3 and 60 MHz, were analyzed in terms of modulation of the zero field splitting tensor for the S = 5/2 manifold. Values of correlation times for tensor fluctuation (τv) and chemical exchange of water molecules (τM) show the expected temperature dependence, with activation enthalpies of −1.94 and −2.46 ± 0.2 kJ mol−1, respectively. The cluster of water molecules located in the close proximity of the heme is progressively reduced in size by increasing the temperature, with Δ= 68 ± 28 kJ mol−1 and Δ= 200 ± 80 J mol−1 K−1. These results highlight the role of the water solvent in heme-HSA structure-function relationships.  相似文献   

18.
The kinetic results of the oxidative addition of iodomethane to Bu4N[Ir2(μ-Dcbp)(cod)2] (Dcbp = 3,5-dicarboxylatepyrazolate anion) show that oxidative addition can occur via a direct equilibrium pathway (K1 = 88(22) acetone, 51(3) 1,2-dichloroethane, 55(4) dichloromethane, 52(12) acetonitrile and 43(5) M−1 chloroform) or a solvent-assisted pathway (k2, k3). Oxidative addition occurs mainly along the direct pathway, which is a factor 10-40 faster than the solvent-assisted pathway. The observed solvent effect cannot be attributed to the donosity or polarity of the solvents. The fairly negative ΔS value (−110(7) J K−1 mol−1) and the positive ΔH value (+47(2) kJ mol−1) for the oxidative addition step are indicative of an associative process.  相似文献   

19.
Two 15N-labelled cis-Pt(II) diamine complexes with dimethylamine (15N-dma) and isopropylamine (15N-ipa) ligands have been prepared and characterised. [1H,15N] HSQC NMR spectroscopy is used to obtain the rate and equilibrium constants for the aquation of cis-[PtCl2(15N-dma)2] at 298 K in 0.1 M NaClO4 and to determine the pKa values of cis-[PtCl(H2O)(15N-dma)2]+ (6.37) and cis-[Pt(H2O)2(15N-dma)2]2+ (pKa1 = 5.17, pKa2 = 6.47). The rate constants for the first and second aquation steps (k1 = (2.12 ± 0.01) × 10−5 s−1, k2 = (8.7 ± 0.7) × 10−6 s−1) and anation steps (k−1 = (6.7 ± 0.8) × 10−3 M−1 s−1, k−2 = 0.043 ± 0.004 M−1 s−1) are very similar to those reported for cisplatin under similar conditions, and a minor difference is that slow formation of the hydroxo-bridged dimer is observed. Aquation studies of cis-[PtCl2(15N-ipa)2] were precluded by the close proximity of the NH proton signal to the 1H2O resonance.  相似文献   

20.
In order to examine the effects of coordinated hydroxide ion and free hydroxide ion in configurational conversion of a tetraamine macrocyclic ligand complex, the kinetic of the cis-to-planar interconversion of cis-[Ni(isocyclam)(H2O)2]2+ (isocyclam = 1,4,7,11-tetraazacyclotetradecane) has been examined spectrophotometrically. All kinetic data have been satisfactorily fitted by the rate law, R = (k1KOH[OH]2 + k2[OH])(1 + KOH[OH])−1(cis-[Ni(isocyclam)(H2O)2]2+ + [Ni(isocyclam)(OH)]+), where k2 = (3.40 ± 0.12) × 103 dm3 mol−1 s−1 is almost equal to kOH determined in buffer solution (lowly basic media), KOH = 22.7 ± 1.4 dm3 mol−1 at I (ionic strength) = 0.10 mol dm−3 (NaClO4 + NaOH) and 25.0 °C. Rate constants, k2 and KOH, are functions of ionic strength, giving a good evidence for an intermolecular pathway. The reaction follows a free-base-catalyzed mechanism where nitrogen inversion, solvation and ring conformational changes are occurred.  相似文献   

设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号