On a probabilistic model for the numerical estimation of nocturnal migration of birds

The study of nocturnal bird migration by cone methods of observation has a century-long history but has continued to be used up to the present. To describe the flux and estimate the number of passing birds a probabilistic model is proposed. This model is based on the concept of dynamic Poisson ensemble of points in appropriate phase space and has two parameters. One is scalar and the other one is functional. We constructed consistent estimations of these parameters and discuss their use for the numerical estimation of the flux of birds observed in a narrow light cone generated by the bright lunar disk and formed by an open angle of telescope. Selection on the same type of birds was suggested as the necessary condition for the model application. Ground speed of each bird was introduced into the model as a new but obligatory value determining the quantification of the flux of bird.     

Phenotypic plasticity alone cannot explain climate‐induced change in avian migration timing

Recent climate change has been linked to shifts in the timing of life-cycle events in many organisms, but there is debate over the degree to which phenological changes are caused by evolved genetic responses of populations or by phenotypic plasticity of individuals. We estimated plasticity of spring arrival date in 27 species of bird that breed in the vicinity of an observatory in eastern North America. For 2441 individuals detected in multiple years, arrival occurred earlier during warm years, especially in species that migrate short distances. Phenotypic plasticity averaged −0.93 days °C⁻¹ ± 0.70 (95% CI). However, plasticity accounted for only 13–25% of the climate-induced trend in phenology observed over 46 years. Although our approach probably underestimates the full scope of plasticity, the data suggest that part of the response to environmental change has been caused by microevolution. The estimated evolutionary rates are plausible (0.016 haldanes).     

SE- and SW-migrating Blackcap (Sylvia atricapilla) populations in Central Europe: Orientation of birds in the contact zone

In the Blackcap (Aves: Sylvia atricapilla), a widespread passerine noctural migrant, a “migratory divide” between SE- and SW-migrating populations exists in Central Europe at about 14° E and south of 52° N. The autumn migratory directions are known to have a genetic basis and are expressed in orientation cages in captivity. Migratory directions of birds in the contact zone between the two populations were studied by analysing ringing data and by testing three groups of hand-raised individuals in orientation cages. Available ringing data are insufficient to establish migratory directions in the contact zone north of the Alps. Hand-raised birds from south-west Germany and the most eastern part of Austria oriented SW and SE, respectively, confirming directions known from ringing recoveries. A sample of birds from the contact zone near Linz (Austria) oriented SW to NW (mean = 268°) and was significantly different from both adjoining populations. This contrasts with results of a cross-breeding experiment with mixed pairs of SW- and SE-migrants bred in captivity: The F1-offspring chose southerly directions, intermediate between both parental populations (Helbig, 1991). It is suggested, therefore, that a distinct subpopulation with a large fraction of birds wintering in the British Isles has established itself in the contact zone. Differences in directional choices between groups of siblings from this area indicate that intrapopulation genetic variability is present. This may have led to a rapid spread of the novel W-NW migratory direction, because north of the Alps strong selection seems to be acting against mixing of SE- with SW-migrating populations.     

Palearctic passerines in Afrotropical environments: a review

Previous ecological studies of Palearctic passerine migrants in Africa have claimed to reveal some general features with respect to habitat use, foraging ecology and interspecific relationships with Afrotropical residents. In this review we discuss apparent contradictions between earlier generalisations and more recent results from more detailed field studies and explore in which areas our ecological knowledge and theoretical understanding remain poor and have given rise to misconceptions. For example, it has been claimed that migrants use structurally more diverse and open habitats and that they forage higher and in more peripheral parts of the vegetation than their ecologically similar Afrotropical counterparts, yet in the past these characteristics were often not clearly defined and not always correlated in practice. It has also been stated that migrants are more flexible in habitat use, occupying a wider range of habitat types and employing a higher diversity of foraging techniques, both of which were assumed to be adaptations to permit coexistence with Afrotropical residents by using untapped resources that are only seasonally available. Yet results from studies of the role of competition in shaping migrant-resident communities remain largely unconvincing. While flexibility may facilitate migrant-resident coexistence, it may also favour the evolution of migration because specialists are less able to use their advantages in different environments. We note that definitions of flexibility and specialisation may themselves depend on the ecological or evolutionary approach adopted by researchers. We conclude that few generalisations can safely be made about the ecology of Palearctic migrants in Africa and that adaptive explanations for the behaviours observed are largely lacking, as are studies of the fitness consequences of different migrant strategies such as have been conducted in the Nearctic-Neotropical migration system.     

Stopover of migrating birds: simultaneous analysis of different marking methods enhances the power of capture–recapture analyses

Analyses of stopover parameters of migrating birds with Cormack–Jolly–Seber (CJS) capture–recapture models often suffer from low precision due to sparse data sets. Low recapture rates result in low power to detect violations of the underlying assumptions and factors influencing stopover behaviour. We studied stopover behaviour of Palearctic migrant passerines in an oasis in Mauritania, West Africa. Using capture–recapture data and systematic observations of colour-ringed birds, we analysed the effect of increased sample size on probability of stay and recapture probability and the influence of a possible trap response on these parameters. We analysed capture–recapture data with the conventional CJS model and compared the results with those from a multistate model using in addition resighting data. The analyses including resighting data resulted in a higher precision of the estimates of the probabilities of stay compared to analyses using only capture–recapture data of the same individuals. Moreover, the power to detect transients was substantially enhanced. Capture had no effect on the estimates of probability to stay and recapture probability; birds did not leave the stopover site or avoid nets as a reaction to capture. The estimates of probability of stay were up to 15.7% higher when resighting data were included, probably due to the higher power to detect transients and the elimination of the bias induced by non-random temporary emigration when both data types are considered. As a consequence, stopover duration would have been underestimated when only the capture–recapture data were available. We conclude that additional resightings of colour ringed birds can produce more accurate results needed for enhancing our understanding of stopover ecology of migrants. Electronic supplementary material Supplementary material is available in the online version of this article at and is accessible for authorized users. From the Swiss Ornithological Institute project on bird migration across the Sahara.     

Comparison of trace element and stable isotope approaches to the study of migratory connectivity: an example using two hirundine species breeding in Europe and wintering in Africa

Analyses of stable isotopes and trace elements in feathers may provide important information about location and habitat use during molt, thereby enabling the investigation of migratory connectivity and its ecological consequences in bird species that breed and winter in different areas. We have compared the conclusions arrived at based on the use of these two methods on the same samples of feathers from two migratory birds, the Sand Martin Riparia riparia and the Barn Swallow Hirundo rustica. We investigated the effects of location, age and sex on stable isotope (δ¹³C, δ¹⁵N, δD) and trace element profiles (As, Cd, Mg, Mn, Mo, Se, Sr, Co, Fe, Zn, Li, P, Ti, V, Ag, Cr, Ba, Hg, Pb, S, Ni and Cu). The feathers of adults at the breeding grounds were removed, forcing in birds to grow new feathers at the breeding grounds; this enabled a comparison of composition of feathers grown in Europe and Africa by the same individual. Stable isotope and trace element profiles varied geographically, even at micro-geographic scales, and also among age classes. The results of both methods suggest that food composition and/or source differs between adults and nestlings in the breeding area and that food and/or molting location changes with the age of individuals in Africa. In an attempt to determine the usefulness of data obtained from composition of feathers, we performed discriminant function analyses on information obtained on stable isotopes and trace elements in order to assess the correctness of the classification of group membership. When feathers molted in Africa were compared to those molted in Europe, trace element profiles of the 22 elements generally had a much greater resolution than the stable isotope profiles based on three stable isotopes. The proportion of correctly classified samples was also greater for analyses based on trace elements than for those based on stable isotopes.     

Differential gene expression and functional analysis implicate novel mechanisms in enteric nervous system precursor migration and neuritogenesis

Enteric nervous system (ENS) development requires complex interactions between migrating neural-crest-derived cells and the intestinal microenvironment. Although some molecules influencing ENS development are known, many aspects remain poorly understood. To identify additional molecules critical for ENS development, we used DNA microarray, quantitative real-time PCR and in situ hybridization to compare gene expression in E14 and P0 aganglionic or wild type mouse intestine. Eighty-three genes were identified with at least two-fold higher expression in wild type than aganglionic bowel. ENS expression was verified for 39 of 42 selected genes by in situ hybridization. Additionally, nine identified genes had higher levels in aganglionic bowel than in WT animals suggesting that intestinal innervation may influence gene expression in adjacent cells. Strikingly, many synaptic function genes were expressed at E14, a time when the ENS is not needed for survival. To test for developmental roles for these genes, we used pharmacologic inhibitors of Snap25 or vesicle-associated membrane protein (VAMP)/synaptobrevin and found reduced neural-crest-derived cell migration and decreased neurite extension from ENS precursors. These results provide an extensive set of ENS biomarkers, demonstrate a role for SNARE proteins in ENS development and highlight additional candidate genes that could modify Hirschsprung's disease penetrance.     

The role of skylight polarization in the orientation of a day-migrating bird species

To assess the role of skylight polarization in the orientation system of a day-migrating bird, Yellow-faced Honeyeaters (Lichenostomus chrysops, Meliphagidae) were tested in funnel cages for their directional preferences. In control tests in the natural local geomagnetic field under the clear natural sky, they preferred their normal migratory course. Manipulations of the e-vector by depolarizing the skylight or rotating the axis of polarization failed to affect the orientation as long as the natural geomagnetic field was present. When deprived of magnetic information, the birds continued in their normal migratory direction as long as they had access to information from the natural sky, or when either the sun or polarized light was available. However, when sun was hidden by clouds, depolarizers caused disorientation. — These findings indicate that polarized skylight can be used for orientation when no other known cues are available. However in the hierarchy of cues of this species, the polarization pattern clearly ranks lower than information from the geomagnetic field.     

The relative importance of conditions in wintering and passage areas on spring arrival dates: the case of long-distance Iberian migrants

Remote sensing data have been used in previous studies to assess the effects of winter ecological conditions in Africa on biological parameters recorded in bird populations during the following breeding season in Europe. Based on the results of these studies, we hypothesized that a high productivity of vegetation during the winter and, thus, high resource availability, should advance the arrival of long-distance migrants to the European breeding areas due to enhanced ecological conditions. To test this hypothesis, between 1982 and 2000 we examined the first arrival date to the Iberian Peninsula of five species (White Stork, Cuckoo, Common Swift, Barn Swallow and Nightingale) in relation to several explanatory variables: ecological conditions in their African wintering grounds and passage areas, as reflected by the normalized difference vegetation index (NDVI), temperature and precipitation in their passage areas and the winter North Atlantic Oscillation (NAO). Ecological conditions in the wintering areas were important for White Stork, Cuckoo and Barn Swallow phenology, while both NDVI in passage areas and NAO did not have an effect on any species. Migratory birds arrived earlier after winters with high vegetation productivity in Africa. Temperature in passage areas was important for the later species (i.e. Cuckoo, Common Swift and Nightingale), although in all cases the true relevance of this factor was scarce due to the poor explanatory capacity of the models. These species were recorded in the Iberian Peninsula earlier in the spring of those years with warmer temperatures in passage areas. The nexus between African NDVI and arrival phenology is hypothesized through increases in wintering survival rates and/or the faster acquisition of pre-migratory body condition and progression through sub-Saharan areas. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Geographical segregation in Dunlin Calidris alpina populations wintering along the East Atlantic migratory flyway – evidence from mitochondrial DNA analysis

Dunlin Calidris alpina is one of the most abundant shorebirds using coastal habitats in the East Atlantic migratory flyway, that links arctic breeding locations (Greenland to Siberia) with wintering grounds (West Europe to West Africa). Differential migration and winter segregation between populations have been indicated by morphometrics and ringing recoveries. Here, we analyse the potential of genetic markers (mitochondrial DNA – mtDNA) to validate and enhance such findings. We compared mtDNA haplotypes frequencies at different wintering sites (from north-west Europe to West Africa). All birds from West Africa had western (European) haplotypes, while the eastern (Siberian) haplotypes were only present in European winter samples, reaching higher frequencies further north in Europe. Compilation of published results from migrating birds also confirmed these differences, with the sole presence of European haplotypes in Iberia and West Africa and increasingly higher frequencies of Siberian haplotypes from south-west to north-west Europe. Comparison with published haplotype frequencies of breeding populations shows that birds from Greenland, Iceland, and North Europe were predominant in wintering grounds in West Africa, while populations wintering in West Europe originated from more eastern breeding grounds (e.g. North Russia). These results show that genetic markers can be used to enhance the integrative monitoring of wintering and breeding populations, by providing biogeographical evidence that validate the winter segregation of breeding populations.     

杭州湾大桥周边鸟类资源现状调查

杭州湾跨海大桥横跨我国杭州湾海域,位于杭州湾的中心地带。大桥建成以后,鸟撞的事件时有发生,这对来往车辆和鸟类的迁徙造成影响。为此,我们于2008年10月至2009年10月对杭州湾大桥周边的鸟类群落结构进行了调查,并结合30年杭州湾鸟类回收的数据对鸟类迁徙进行了分析,希望为相关管理部门制定保护方案提供基础资料。调查地点的选择是围绕杭州湾大桥进行的,分别是北岸湿地海宁东西湖,南岸湿地慈溪庵东湿地和慈溪四灶浦水库。共记录到鸟类163种,71589只。其中列入中国鸟类红皮书有濒危种东方白鹳(Ciconia boyciana)、黑脸琵鹭(Platalea. minor);易危种白琵鹭(P. leucorodia)、鸳鸯(Aix galericulata)、黑翅鸢(Elanus caeruleus)、黑嘴鸥(Larus saundersi)、小鸦鹃(Centropus bengalensis),稀有种鹗(Pandion haliaetus)、半蹼鹬(Limnodromus semipalmatus)。研究结果表明,杭州湾水鸟在三个地点的数量呈季节性的变化,由多至少依次为春季、秋季、冬季和夏季;多样性的平均值由高至低依次为夏季、春季、冬季和秋季,不同的生境类型优势种的分布是有差异的。在杭州湾共记录到55只回收鸟,大多数在澳大利亚、新西兰、中国台湾越冬的鸻鹬类,将杭州湾作为迁徙停歇地,尤其在春季北迁时。最后,对杭州湾大桥的管理提出保护建议。     

Nocturnal orientation of robins, Erithacus rubecula: birds caught during migratory flight are disoriented

For conventional experiments on the orientation behavior of migrant birds in funnels, either hand-raised birds or birds caught during resting periods at stopover sites are generally used. Topographic circumstances at the Alpine pass Col de Bretolet at the Switzerland/France border allow the capture of birds during active migratory flight during the whole night. These birds are in full migratory disposition. We expected them to orient in the seasonally appropriate direction more accurately than birds that had not experienced migration just before the funnel experiment. Experiments with robins, however, revealed a strong influence of the moon on the orientation behavior. The birds did not orient in the seasonally expected migratory direction but showed positive phototaxis, usually toward the lightest part of the funnel in the direction opposite to the moon. When the moon was absent the robins were disoriented. Sunset experiments with robins caught during the night before the experiment revealed a strong phototactic reaction toward the setting sun. As reasons for this poor orientation in the absence of light stimuli, the influence of the topography of the mountainous region and magnetic anomalies can be excluded. It is concluded that freshly caught birds are too stressed when tested immediately after capture or that the migration direction cannot be maintained. Testing of night migrants in complete darkness is also of disadvantage. Received: 23 December 1998 / Received in revised form: 16 July 1999 / Accepted: 30 July 1999     

Migratory connectivity and temporal segregation of dunlin (Calidris alpina) in Portugal: evidence from morphology, ringing recoveries and mtDNA

Migratory connectivity plays an important role in conservation of long-distance migrant birds. Here, we study migratory links of dunlin (Calidris alpina), focusing on a stopover and wintering region (Portugal) where it is known that migration routes of dunlin from a broad geographic range (three subspecies) converge, and populations occur simultaneously or separated in time. We combine three methods (ringing recoveries, morphometrics and molecular genetics) to assess breeding origins and extent of temporal segregation of dunlin assemblages. Ringing recoveries show temporal separation of dunlin from different migration routes. Birds found in Portugal during August and September, migrating via Britain, reveal links to breeding areas in Iceland and Greenland. In October, a clear shift to more eastern migration routes occurs, with most Portuguese winter records from stopover sites along migration routes of populations from northern Scandinavia and Russia. Mitochondrial DNA (mtDNA) of Portuguese dunlin was compared with breeding populations. Spring and autumn migrants in Portugal corresponded to C. a. schinzii and C. a. arctica populations, while the Portuguese winter population clearly differs by including mtDNA haplotypes of C. a. alpina. For genetically sexed individuals, we found significant differences in morphology (bill and tarsus length) supporting the temporal separation of populations/subspecies revealed by recoveries and mtDNA. Our results give evidence for migratory connectivity of dunlin populations between geographic areas previously not considered connected. They confirm the existence of clear differences in breeding origin between birds in Portugal at different times of year. These results are important in the consideration of future long-term conservation plans.     

Isotope signatures in winter moulted feathers predict malaria prevalence in a breeding avian host

It is widely accepted that animal distribution and migration strategy might have co-evolved in relation to selection pressures exerted by parasites. Here, we first determined the prevalence and types of malaria blood parasites in a breeding population of great reed warblers Acrocephalus arundinaceus using PCR. Secondly, we tested for differences in individual feather stable isotope signatures (delta (13)C, delta (15)N, deltaD and delta (34)S) to investigate whether malaria infected and non-infected birds had occupied different areas in winter. We show that birds moulting in Afro-tropical habitats with significantly higher delta (13)C and delta (15)N but lower deltaD and delta(34)S values were more frequently infected with malaria parasites. Based on established patterns of isotopic distributions, our results indicate that moulting sites with higher incidence of malaria are generally drier and situated further to the north in West Africa than sites with lower incidence of malaria. Our findings are pertinent to the general hypothesis that animal distribution and particularly avian migration strategy might evolve in response to selection pressures exerted by parasites at different geographic scales. Tradeoffs between investment in energy demanding life history traits (e.g. migration and winter moult) and immune function are suggested to contribute to the particular choice of habitat during migration and at wintering sites.     

What determines probability of surviving predator attacks in bird migration?: the relative importance of vigilance and fuel load

Migrating birds must accumulate fuel during their journeys and this fuel load should incur an increased risk of predation. Migratory fuelling should increase individual mass-dependent predation risk for two reasons. First, acquisition costs are connected to the increased time a bird must spend foraging to accumulate the fuel loads and the reduced predator detection that accompanies foraging. Second, birds with large fuel loads have been shown to suffer from impaired predator evasion which makes them more vulnerable when actually attacked. Here, I investigate the relative importance of these two aspects of mass-dependent predation risk and I have used published data and a hypothetical situation for a foraging bird to investigate how much migratory fuelling in terms of escape performance and natural variation in predator detection contribute to individual risk during foraging. Results suggest that for birds foraging close to protective cover the negative impact of fuel load on flight performance is very small, whereas variation in time to predator detection is of great importance for a bird's survival. However, the importance of flight performance for predation risk increases as the distance to cover increases. Hence, variation in predator detection (and vigilance) probably influences individual survival much more than migratory fuel load and consequently, to understand risk management during migration studies that focus on vigilance and predator detection during fuelling are much needed.     

Seasonality in basal metabolic rate and thermal conductance in a long-distance migrant shorebird,the knot (Calidris canutus)

Knots Calidris canutus live highly seasonal lives, breeding solitarily on high arctic tundra and spending the non-breeding season in large social flocks in temperate to tropical estuaries. Their reproductive activities and physiological preparations for long flights are reflected in pronounced plumage and body mass changes, even in long-term captives of the islandica subspecies (breeding in north Greenland and northeast Canada and wintering in western Europe) studied in outdoor aviaries. The three to four fattening episodes in April-July in connection with the flights to and from the high arctic breeding grounds by free-living birds, are represented by a single period of high body mass, peaking between late May and early July in a sample of ten captive islandica knots studied over four years. There are consistent and synchronized annual variations in basal metabolic rate and thermal conductance in three islandica knots. Basal metabolic rate was highest during the summer body mass peak. Within the examined individuals, basal metabolic rate scales on body mass with an exponent of about 1.4, probably reflecting a general hypertrophy of metabolically expensive muscles and organs. Any potential effect of moult on basal metabolic rate was obscured by the large seasonal mass-associated variations. In breeding plumage, insulation (the inverse of thermal conductance) was a factor of 1.35 lower than in winter plumage. This was paralleled by the dry mass of contour feathers being a factor of 1.17 lower. In this subspecies the breeding season is indeed the period during which the costs of thermoregulation are lowest. In captive knots seasonal changes in basal metabolic rate and thermal conductance likely reflect an anticipatory programme adaptive to the variable demands made by the environment at different times of the year.     

Test of a digestion optimization model: effect of variable-reward feeding schedules on digestive performance of a migratory bird

Birds on migration often alternate between feeding and nonfeeding periods, in part because food resources may be patchily distributed and in part because birds on migration may adopt a risk-prone foraging strategy characterized by selection of variable rather than constant food rewards. Optimal digestion models predict that increases in intermeal interval like those encountered by some migratory birds should result in longer retention time of digesta and higher digestive efficiency if birds are maximizing their rate of energy intake. We tested these predictions by comparing residence time of digesta and extraction efficiency of lipid for captive yellow-rumped warblers (Dendroica coronata) feeding adlibitum and when we added intervals of time when the birds received no food. We increased the likelihood that the warblers were maximizing their rate of energy intake by increasing light levels during spring to induce hyperphagia (treatment birds (16L:8D light: dark cycle) ate 2.13 ± 0.14 g dry food day⁻¹ (n = 8) while control birds (10L:14D) ate 1.25 ± 0.03 g dry food day⁻¹ (n = 6)). Treatment birds offered food only every other 2–3 h ate 50% more during the 4-h test period than when they were always feeding adlibitum. Despite these differences in food intake, extraction efficiency of glycerol trioleate remained high and constant (93%), and mouth-to-anus total mean retention time (TMRT) did not change (overall mean: 54.8 ± 6.0 min). Residence time of lipid in the stomach increased whereas residence time of lipid in the intestine decreased when birds fed only every other 2–3 h compared to when birds always fed ad libitum. None of the results were consistent with the predictions of the optimal digestion model unless we assume that birds were minimizing their feeding time rather than maximizing their rate of energy gain. Furthermore, the ability of yellow-rumped warblers to maintain high extraction efficiency with no change in TMRT suggests some spare digestive capacity when food intake increases by as much as 50%. Received: 14 June 1997 / Accepted: 20 November 1997     

渤海湾两株H2亚型禽流感病毒的 遗传进化分析

野鸟是禽流感病毒的自然储存库,病毒可以随着宿主的迁徙传播给其他野鸟与家禽。渤海湾是鸟类南北迁徙的重要停歇地,也是东亚-澳大利西亚鸟类迁徙通道的重要组成部分,每年有大量水鸟在渤海湾停歇,促进了禽流感病毒的传播。为了解渤海湾地区禽流感病毒的传播及进化与水鸟迁徙的相关性,2018年春季鸟类迁徙期间的4和5月份,在渤海湾采集鸻鹬类粪便样品2 120份,对样品进行检测,分离出2株H2亚型禽流感病毒。对这2株H2亚型禽流感病毒进行了分子特征及遗传进化分析,并结合渤海湾水鸟的环志回收数据,对H2亚型病毒的重组及遗传进化与水鸟迁徙的联系进行了分析。结果表明,2株分离株的HA蛋白裂解位点符合低致病性禽流感病毒的分子特征,它们的8个基因片段同源性均不高,其中879-H2N7的8个基因片段分别与我国福建和澳大利亚的毒株同源性最高,遗传关系最近;854-H2N8的8个基因片段分别与我国湖南以及日本、韩国、孟加拉国和越南的毒株同源性最高,遗传关系最近。渤海湾水鸟的环志回收数据分析表明,879-H2N7随着野鸟的迁徙在渤海湾、福建沿海和澳大利亚之间进行传播与扩散;854-H2N8可能跨越东亚-澳大利西亚和中亚-印度两条通道之间进行基因重组和进化,并会随着鸟类迁徙进行传播和扩散。