Composition of the fungal flora of four cereal grains in Saudi Arabia

Using the grain-plate method and on glucose-Czapek's agar at 28°C, fifty-eight species belonging to 26 genera were collected from barley (42 species and 19 genera), maize (29 species and 16 genera), sorghum (32 species and 17 genera) and wheat grains (42 species and 18 genera).The most frequent genera were Aspergillus, Penicillium, Rhizopus, Fusarium, and Mucor followed by Alternaria, Drechslera, and Curvularia. From the preceding genera Aspergillus flavus, A. niger, Penicillium notatum, Rhizopus stolonifer, Fusarium moniliforme, Mucor racemosus, Alternaria alternata, Drechslera spicifera, and Curvularia lunata were the most prevalent species in the four types of grains tested.     

Survey of the mycoflora of barley grains in Egypt

The fungi of 40 samples of barley grains collected from Upper Egypt were estimated using the dilution- and the grain-plate methods. 33 genera and 109 species, in addition to 2 varieties of Aspergillus nidulans, one variety of Aspergillus flavus and one variety of Penicillium cyclopium were identified. The spectrum of fungal genera and species collected by the grain-plate method (29 genera and 94 species+3 varieties) was broader than by the dilutionplate method (27 genera and 71 species+3 varieties), but the order of frequency of occurrence of fungal genera and species was basically similar in the two methods. The most frequent genera were Aspergillus (25 species+3 varieties), Penicillium (32 species+1 variety), Rhizopus (2 species), Alternaria (2 species), Fusarium (6 species) and Drechslera (5 species) and were represented (as assayed by the grainplate method) in 100 %, 77.5 %, 85 % 62,5 %, 60 % and 52.5 % of the samples constituting 60.4 %, 10.2 %, 7.7 %, 3.7 %, 5 % and 2.3 % of the gross total count of fungi respectively. From the preceding genera A. niger, A. fumigatus, A. flavus, A. sydowii, P. notatum, P. citrinum, F. oxysporum, F. moniliforme, F. solani, R. stolonifer, A. alternata and D. spicifera were the most frequent.     

Rhizosphere and rhizoplane fungi of Triticum vulgare cultivated in Saudi Arabia

131 species in addition to 7 varieties which belong to 40 genera were collected from the rhizosphere (36 genera and 120 species + 7 varieties) and rhizoplane (27 genera and 56 species + 2 varieties) of Triticum vulgare. More than 22 species and 3 varieties were not encountered previously from soils or other sources in Saudi Arabia.In the rhizosphere, Aspergillus and Penicillium contributed the broadest spectrum of species (26 species + 5 varieties; and 24 species, respectively). The most frequent fungi were Aspergillus niger, A. clavatus, A. flavus, A. terreus, A. carneus, Penicillium citrinum, P. notatum, P. chrysogenum and Fusarium solani. In the rhizoplane which is a more selective substratum for fungi than the rhizosphere, the picture of dominance became different and the most common fungi were Fusarium solani, F. oxysporum, F. moniliforme, Drechslera spicifera, Cephalosporium roseo-griseum, Stemphylium botryosum, Acremonium strictum and Rhizoctonia solani.     

The mycoflora of peanuts in Egypt

Twenty-six genera and Sixty-six species, in addition to two varieties of Aspergillus nidulans and one variety of Humicola grisea were isolated from 80 peanut seed (uncovered or covered within shell at the time of sampling) samples and 40 samples of shells collected from different places in Egypt.At 28 °C, the broadest spectrum of genera and species was recorded in the shells (21 genera and 53 species), followed by the naked seeds (16 genera and 38 species) and the covered seeds (17 genera and 33 species). Aspergillus and Penicillium were regularly the most common genera in the three substrates. A. niger, A. fumigatus, A. flavus A. terreus, A. ochraceus and P. funiculosum were generally the most common fungal species recovered from the three substrates. A. flavus was represented in 80%, 60% and 80% of the samples constituting 16.1%, 8.4% and 27.2% of the total count of fungi of the shells, covered and uncovered seeds respectively.At 45 °C, nine genera and sixteen species were collected of which Aspergillus fumigatus was extremely dominant in the three substrates, followed by A. terreus and A. niger. Penicillium was completely eliminated.     

Alternative pathways in grass spikelet development

To the casual observer, one grass inflorescence looks very much like another and yet the family has diverged to nearly 800 genera and almost 10 000 species; is distributed worldwide and has become the centrepiece of agriculture. Such predominance can, in part, be explained by the subtlety with which spikelet operates since there is an elaborate interplay between the physiology of the spikelet and the immense reproductive versatility of the Poaceae.Physiological studies have centred on maize, wheat, rice and to a lesser extent, barley and sorghum. A grass taxonomist can readily demonstrate that maize, wheat and barley are relatively atypical grasses. Less familiar genera are able to provide the physiologist with problems that are unusual and stimulating.From such a viewpoint, the physiological problems presented by the spikelets of such genera as Cenchrus, Eragrostis, Phragmites, and Rottboellia will be examined.     

Mycoflora of bean,broad bean,lentil, lupine and pea seeds in Saudi Arabia

Using the seed-plate method on glucose-Czapek's agar at 28 °C (±2 °C), 24 genera and 60 species in addition to two varieties were collected from bean, broad bean, lentil, lupine and pea seeds. The most frequent genera were Aspergillus (16 species + two varieties), Penicillium (14 species), Rhizopus (1 species) and Yeasts, followed by Fusarium (3 species), Mucor (4 species) and Drechslera (3 species). From the preceding genera, Aspergillus niger, A.flavus, Penicillium citrinum, Rhizopus stolonifer, Fusarium moniliforme or F. oxysporum, Mucor hiemalis or M. racemosus and Drechslera spicifera were the most prevalent species.     

Cellulose-decomposing fungi of barley grains in Egypt

100 species and 2 varieties of A. nidulans which belong to 35 genera were identified from 40 samples of barley collected from different places in Upper Egypt. Two methods of isolation were used: the grain-and the dilution plate. The spectrum of fungal genera and species collected by the former (35 genera, 96 species+1 variety) was broader than by the latter method (28 genera, 76 species+1 variety). Nine genera were of high occurrence (represented in more than 50% of the samples) namely, Aspergillus, Penicillium, Fusarium, Alternaria, Chaetomium, Cladosporium, Humicola, Drechslera and Myrothecium. The most frequent species were A. fumigatus, A. niger, A. flavus, A. sydowii, F. oxysporum, F. moniliforme, A. alternata, M. verrucaria, P. funiculosum, P. corylophilum, P. duclauxi, C. herbarum, C. globosum, D. spicifera and H. grisea. Several fungi such as Chaetomium, Humicola, Altemaria, Drechslera, Stachybotrys, Myrothecium, Pénicillium corylophilum and P. funiculosum were far more frequently recovered on cellulose than on glucose agar.     

Mycoflora isolation and molecular characterization of Aspergillus and Fusarium species in Tunisian cereals

Wheat, barley and maize are the mainly consumed cereals in Tunisia. This study aimed to determine the mycoflora of these cereals with special focus on the mycotoxigenic Aspergillus and Fusarium species. Freshly harvested samples and other stored samples of each type of cereal (31 and 34 samples, respectively) were collected in Tunisia and cultured for fungal isolation and identification. Identification of fungal genera was based on morphological features. Aspergillus and Fusarium species were identified by species specific PCR assays complemented with DNA sequencing. Alternaria (70.83%), Eurotium (62.50%), Aspergillus (54.17%) and Penicillium (41.67%) were the most frequent fungi isolated from wheat. Penicillium (75%), Aspergillus (70%), Eurotium (65%) and Alternaria (65%) were the most frequently recovered genera from barley. The predominant genera in maize were Aspergillus (76.19%), Eurotium (42.86%), and Penicillium (38.09%). Aspergilllus, Penicillium, Fusarium and Alternaria were detected in both stored and freshly harvested grain samples. The frequencies of contamination with Aspergillus, Fusarium and Alternaria were higher in freshly harvested samples, whereas Penicillium species were more frequent in stored samples. The predominant Aspergillus species detected were A. flavus and A. niger. The Fusarium species detected were F. equiseti, F. verticillioides, F. nygamai, and F. oxysporum. This study suggested the potential risk for Aflatoxins and, to a lesser extent, for Ochratoxin A in Tunisian cereals. This is the first survey about mycoflora associated with wheat, barley and maize in Tunisia.     

Cellulose-decomposing fungi of desert soils in Saudi Arabia

Seventy-five species in addition to 5 varieties of cellulose-decomposing which belong to 27 genera were collected during this investigation. Aspergillus (12 species + 4 varieties), Alternaria (4 species), Stachybotrys (3 species + 1 variety), and Penicillium (12 species) were of high frequency of occurrence, of which A. fumigatus, A. niger, A. terreus, A. alternata, A. tenuissima, S. atra, P. citrinum and P. corylophilum were the most common. Six genera were of moderate frequency and these were Botryotrichum (2 species), Macrophomina (1 species), Drechslera (5 species), Ulocladium (4 species), Chaetomium (7 species) and Curvularia (4 species) of which B. atrogriseum, D. spicifera, D. sativus, Ubotrytis, C. spirale and C. lunata were the most prevalent. Five and twelve genera were recovered on cellulose-Czapek's agar plates in low and rare frequency of occurrence, respectively.     

Studies on the fungus flora of three grains in Egypt

In wheat, corn and sorghum grains twenty-six genera and seventy-seven species including sixteen ofAspergillus and twenty-one ofPenicillium were identified.In grain samples adjusted to various moisture levels (up to 18.8 % on a dry-weight basis) and stored for 4 months at 8, 20 and 30 C seed-borne fungi were monthly identified and counted, and the germinability of the grains was tested. In the control samples (moisture content 7.1–8.2 %) temperature had no effect on the fungal counts and on the precentage germination. With the rise of temperature and moisture content the fungal counts markedly increased and the germinability declined.The list of fungi dominant in one or more of the experiments, included eight species ofAspergillus, six ofPenicillium, two ofFusarium and one each ofAlternaria andCurvularia. The order of dominance of these fungi varied according to the type of grain, the length of storage and the treatment.A. niger was the dominant organism in the control samples of the three grains. It could grow successfully at high moisture contents but above 15 %, it was usually overgrown by other fungi. In wheatP. citrinum andA. sydowii, in cornP. citrinum andA. terreus, and in sorghumA. terreus andA. niger were the dominant fungi at moisture contents above 15 % after four months storage at 30 C. When stored at 8 CPenicillium species tended to predominate over other fungi in grains with high moisture contents.In surface-sterilized grains adjusted to 15 % moisture content, inoculated with six dominant fungi separately and incubated at 30 C,A. niger, P. citrinum andP. variabile caused severe deterioration in the three grains;A. ochraceus in wheat only andF. moniliforme in wheat and corn;C. spicifer was slightly injurious to the three grains.     

Development of Early Infection Structures of Puccinia recondita f. sp. tritici in Non-host Cereal Species

The development of infection structures, derived from urediospores of Puccinia recondita f.sp. trilici in nearisogenic lines of susceptible and resistant wheat, and in non-hosts (viz. maize, oat, sorghum and barley), was examined by fluorescence microscopy and scanning electron microscopy (SEM). The infection structure formation on and in five cereal species follows a similar pattern. In sorghum, fungal development is arrested at the stage of substomatal vesicle formation, while, in maize, most fungal structures collapse during the stage of primary hypha development. By contrast, in wheat, barley and oat, the fungus forms many branched infection hyphae and haustorial mother cells.     

Cereal asparagine synthetase genes

Asparagine synthetase catalyses the transfer of an amino group from glutamine to aspartate to form glutamate and asparagine. The accumulation of free (nonprotein) asparagine in crops has implications for food safety because free asparagine is the precursor for acrylamide, a carcinogenic contaminant that forms during high‐temperature cooking and processing. Here we review publicly available genome data for asparagine synthetase genes from species of the Pooideae subfamily, including bread wheat and related wheat species (Triticum and Aegilops spp.), barley (Hordeum vulgare) and rye (Secale cereale) of the Triticeae tribe. Also from the Pooideae subfamily: brachypodium (Brachypodium dIstachyon) of the Brachypodiae tribe. More diverse species are also included, comprising sorghum (Sorghum bicolor) and maize (Zea mays) of the Panicoideae subfamily and rice (Oryza sativa) of the Ehrhartoideae subfamily. The asparagine synthetase gene families of the Triticeae species each comprise five genes per genome, with the genes assigned to four groups: 1, 2, 3 (subdivided into 3.1 and 3.2) and 4. Each species has a single gene per genome in each group, except that some bread wheat varieties (genomes AABBDD) and emmer wheat (Triticum dicoccoides; genomes AABB) lack a group 2 gene in the B genome. This raises questions about the ancestry of cultivated pasta wheat and the B genome donor of bread wheat, suggesting that the hybridisation event that gave rise to hexaploid bread wheat occurred more than once. In phylogenetic analyses, genes from the other species cluster with the Triticeae genes, but brachypodium, sorghum and maize lack a group 2 gene, while rice has only two genes, one group 3 and one group 4. This means that TaASN2, the most highly expressed asparagine synthetase gene in wheat grain, has no equivalent in maize, rice, sorghum or brachypodium. An evolutionary pathway is proposed in which a series of gene duplications gave rise to the five genes found in modern Triticeae species.     

Ecology of fungi associated with moist stored barley grain

A study of the ecology of fungi associated with moist stored barley grain was carried out on samples from a partially sealed silo in Cumberland. Samples were collected during harvest and after storage at high moisture content in a partially sealed silo. At harvest, the field fungi Alternaria, Fusarium, Cladosporium and Mucor spp. were dominant both in the husks and in the dehusked, surface-sterilized grain but they were rapidly succeeded by the storage fungi: Aspergillus, Penicillium and Absidia spp. then constituted about 80 % of the initial invasion. At this stage internal grain infection rarely exceeded 5 % compared to 65–80 % infection in the husks. In subsequent months, there was a remarkable increase in invasion, mainly by Penicillium, Aspergillus and Absidia spp. and by yeasts, which appeared both in the husks and in dehusked grain. In the third month of storage, Penicillium cyclopium, P. roqueforti, Absidia corymbifera, Aspergillus candidus, A. terreus and yeasts became dominant. The thermophilous species Aspergillus fumigatus, A. terreus, Absidia corymbifera, Mucorpusillus and Dactylomyces crustaceus were isolated from husks and in dehusked grain incubated at 37 and 45 °C. Most grains were infected significantly by single genera.     

Study on the mycoflora of Egyptian soils

Fifty genera and 155 species, in addition to three varieties of Aspergillus nidulans, were isolated from 100 soil samples collected from different localities in Egypt. Aspergillus (33 species in addition to 3 varieties of A. nidulans), Penicillium (46 species), Fusarium (6 species) and Mucor (4 species) were of high occurrence, from which A. niger, A. fumigatus, A. terreus, M. racemosus, P. notatum, P. chrysogenum and A. flavus were dominant. Five genera were of moderate occurrence and these were Humicola, Myrothecium, Rhizopus, Cochliobolus and Alternaria. Fourteen genera were of low occurrence namely, Cunninghamella, Chaetomium, Stachybotrys, Cladosporium, Syncephalastrum, Paecilomyces, Trichoderma, Scolecobasidium, Circinella, Curvularia, Ulocladium, Botryotrichum, Sepedonium and Gliocladium. Twenty-seven genera were of rare occurrence.Fourteen species were of moderate occurrence and these were A. sydowii, M. verrucaria, P. funiculosum, A. versicolor, H. grisea, F. oxysporum, A. nidulans, F. moniliforme, A. alternata, F. solani, M. hiemalis, A. candidus, R. nigricans and A. ochraceus. The remaining species were of low or rare occurrence in soils tested.Comparison between the present results and those of others showed that there is no fungal flora characteristic cultivated soils.     

Preliminary Study of Fat Oxidation in Sorghum and Maize Brewing

Superoxide dismutase (SOD) activity in the white sorghum farafara and ICRISAT sorghum variety – ICSV 400 was at a high activity in the embryo at about 8 SOD units/tissue. This activity was almost completely destroyed at 80 °C. Totox index of the brewing grains were 366 for ICSV 400, 312 for farafara, 112 for maize grits and 90 for barley malt. Worts from sorghum/maize and sorghum/barley malt brews all had hydroperoxy linoleic acid (15–19 μM) which remained undetected after wort boiling. Sorghum/maize brews formed very little trub (wort proteinous sediments) in the whirlpool and trub increased in sorghum/barley brews with increased usage of barley malt. Sorghum/maize brews had free fatty acids (FFA) at 22 mg/l in pitching wort but in sorghum/barley brew (50/50) only 9 mg/l. This revised version was published online in July 2006 with corrections to the Cover Date.     

Phytotoxicity of pathogenic fungi and their mycotoxins to cereal seedling viability

Aspergillus flavus, Alternaria alternata and Fusarium oxysporum were the pathogenic fungi most reduced cereal (barley, sorghum and wheat) seedlings. The pathogens have the ability to produce aflatoxin B₁ and G₁, diacetoxyscirpenol, kojic acid and tenuazonic acid that reduced seedling viability. The inhibition dose for 50% reduction (LD₅₀) was recorded by aflatoxins at 0.83 mg L^-1 for barley, 1.74 mg L^-1 for wheat and 2.75 mg L^-1 for sorghum. Diacetoxyscirpenol produced its inhibition at 1.26 mg L^-1 for barley, 3.98 mg L^-1 for wheat and 10 mg L^-1 for sorghum. Kojic acid induced 50% inhibition at 63 mg L^-1 for barley, 105 mg L^-1 for wheat and 251 mg L^-1 for sorghum. However, tenuazonic acid was less toxic where the toxicity ranged between 79–550 mg L^-1. The germination inhibition was more pronounced in barley followed by wheat and was negligible in sorghum for all tested mycotoxins. This inhibition was attributed to the reduction in the seedling amylase activity, where amylase was also reduced in the same trend: barley > wheat > sorghum. Grain treated with carboxin-captan and thiophanatemethyl-thiram at 1 g kg^-1 grain increased the seedlings vigour of wheat in sterilized soil by 45 and 22%, barley by 24 and 33% and sorghum by 15 and 30%, respectively. These fungicides also had a positive effect on cereal when the soil was inoculated with A. flavus, A. alternata and F. oxysporum, but the improvement was still below normal. This revised version was published online in June 2006 with corrections to the Cover Date.     

Alternaria alternata prevalence in cereal grains and soybean seeds from Entre Ríos, Argentina

A mycological survey was carried out at Entre Ríos province, Argentina, on sorghum grain, maize, rice, soybean seeds and on freshly harvested and stored wheat. The isolation frequencies and relative densities of species belonging to genera Alternaria, Aspergillus, Fusarium, Penicillium and other fungi were calculated. Alternaria alternata was the major fungal species isolated from sorghum, rice, soybean seeds and on freshly harvested wheat, and a low incidence of Fusarium species was observed on the same substrates. In maize the major fungal species isolated was Fusarium verticillioides. The high incidence levels of A. alternata observed,suggest that it may be necessary to determine, among other mycotoxins, if Alternaria toxins occur in these commodities.     

Survey of the mycoflora of desert soils in Saudi Arabia

Thirty-four genera and 80 species in addition to one variety of A. nidulans were identified from 40 soil samples colleted from different places in desert of Saudi Arabia. More than forty-two species are new records from Saudi Arabian soils. Aspergillus and Penicillium contributed the greatest number of species (15 species + 1 variety and 13 species respectively).The most frequent genera were Aspergillus, Penicillium, Botryotrichum, and Ulocladium followed by Macrophomina, Rhizopus, Fusarium, Alternaria and Cladosporium from which A. fumigatus, A. terreus, A. niger, A. flavus, P. citrinum, P. corylophilum, B. atrogriseum, U. botrytis, M. phaseoli, R. stolnifer, F. moniliforme, A. alternata and C. herbarum were the most common.Comparison between the present results and those of the other studies showed that there is no fungal flora characteristic of desert soils of Saudi Arabia.     

Mycotoxin-producing potential of fungi associated with qat (Catha edulis) leaves in yemen

Forty-four fungal species belonging to 20 genera were isolated from 30 samples of qat leaves. The most frequent genera wereAspergillus, Alternaria, Penicillium, andCladosporium followed byFusarium, Drechslera, Chœtomium, andMucor. The most prevalent species in above genera wereAspergillus niger, A. flavus, A fumigatus, Alternaria alternata, Penicillium chrysogenum, P. citrinum, Cladosporium cladosporioides, andFusarium verticillioides. From these fungi, 17 species (39%) related to 7 genera (35%) proved to be true endophytes. Eleven out of 75 isolates were mycotoxigenic.A. alternata produced alternariol and alternariol monomethyl ether whereasA. flavus produced aflatoxins B₁ and B₂. Ochratoxin A, sterigmatocystin, citrinin and T-2 toxin were produced byA. ochraceus, A. versicolor, P. citrinum andF. oxysporum, respectively. The presence of such toxigenic fungi associated with qat leaves is considered to be a threat to public health.     

The endophytic fungi from wheat (<Emphasis Type="Italic">Triticum aestivum</Emphasis> L.)

In order to study the species composition of endophytes from wheat healthy plants in Buenos Aires Province (Argentina) and to determine their infection frequencies from leaves, stems, glumes and grains, wheat plants were collected from five cultivars at five growth stages from crop emergence to harvest. A total of 1,750 plant segments (leaves, stems, glumes and grains) were processed from the five wheat cultivars at five growth stages, and 722 isolates of endophytic fungi recovered were identified as 30 fungal genera. Alternaria alternata, Cladosporium herbarum, Epicoccum nigrum, Cryptococcus sp., Rhodotorula rubra, Penicillium sp. and Fusarium graminearum were the fungi that showed the highest colonization frequency (CF%) in all the tissues and organs analysed. The number of taxa isolated was greater in the leaves than those in the other organs analysed.