Nitrogen Fixation by Free-living Bacteria in the Soil and in the Canopy of Douglas Fir

Nitrogen fixing bacteria have been isolated from the soil andthe leaves of Douglas fir. Measurements, taken at monthly intervalsusing ¹⁵N, have shown that small quantities of nitrogen arefixed on the leaves and in the various soil layers and thatthe highest rates of fixation occur in the spring. Further studieswith ¹⁵N have shown that the products of nitrogen fixation inDouglas fir soils are available for growth of seedlings andfor denitrification.     

Microbiological and biochemical effects of the application of bitumenous emulsions as soil conditioners

Summary Bitumenous emulsions, used as soil conditioners for various soil textural classes, caused no dramatic short-term or long-term alterations of various soil microbial populations and enzymatic activities. A certain inhibition of the soil microbial populations and enzymes occured at the higher application rates (1.0–1.5 l/m²) of bitumen, especially in the sand and clay soils, while an enhancement was often noted at the lower rates (0.5–0.75 l/m²), particularly in the loam soils. re]19721019     

Factors affecting the attachment of rhizospheric bacteria to bean and soybean roots

The plant rhizosphere is an important soil ecological environment for plant-microorganism interactions, which include colonization by a variety of microorganisms in and around the roots that may result in symbiotic, endophytic, associative, or parasitic relationships within the plant, depending on the type of microorganisms, soil nutrient status, and soil environment. Rhizosphere competence may be attributable to the differences in the extent of bacterial attachment to the root surface. We present results of the effect of various factors on the attachment to bean (Phaseolus vulgaris) and soybean (Glycine max) roots of some bacterial species of agronomic importance, such as Rhizobium tropici, Rhizobium etli, Ensifer fredii (homotypic synonym Sinorhizobium fredii), and Azospirillum brasilense; as well as the attachment capability of the plant growth promoting rhizobacteria Pseudomonas fluorescens and Chryseobacterium balustinum. Additionally, we have studied various bacterial traits, such as autoaggregation and flagella movements, which have been postulated to be important properties for bacterial adhesion to surfaces. The lack of mutual incompatibility between rhizobial strains and C. balustinum has been demonstrated in coinoculation assays.     

On the long-term survival of keratinophilic fungi in non-sterile soil

Sixty samples belonging to various types of soil have been stored for 10 years (1959–1969), to obtain further data on the long-term survival of keratinophilic fungi in non-sterile soil. The most resistant proved to beC. keratinophilum, which could be detected even after 10 years, thenK. (T.) ajelloi) 8 years survival, followed byT. terrestre andC. (T.) evolceanui, both showing almost the same capacity of resistance. Only 4 years of survival has been noted forM. gypseum, which was able to resist even in the sandy soil. Interesting was the late finding ofC. keratinophilum, C. evolceanui andC. indicum in some soil samples mixed with old bones.     

Earthworms and eco-consequences: Considerations to soil biological indicators and plant function: A review

Earthworms have been well reported to have a beneficial effect on soil microbes, soil microbial biomass (SMB), fungal community, soil structure, water retention and plant growth in different terrestrial ecosystems. However, the interactions between environmental stressors and various species of earthworms and the subsequent effect on soil microbes, organic matter, soil structure and plant growth are still uncertain. The purpose of this analysis was to test 1- the impact of environmental stressors on earthworm behaviour. 2- the effect of various earthworms on soil microbes, plant growth, soil structure and the carbon cycle. We noted that less fatal temperatures are generally unknown, but higher fatal temperatures range from 25 to 48 °C. Earthworms have a role to play, depending on the nature of organic residues, in both the formation and degradation of soil aggregates. Improvements in microbial biomass and plant growth have been established according to temperature, soil toxicity, soil type, earthworms abundance, organic residues types and field conditions. We observed that although the summer temperature in the arid area was approximately (°C 48), it was found that a particular type of earthworm (Namalycastis indica) was responsible for improving soil characteristics.While a great deal of analysis has been carried out on the role of earthworms within the soil ecology, such a review identifies important knowledge gaps, particularly in the determination of the impacts of earthworm species on the soil structure, microbial biomass and plant productivity, in particular since most papers focused on European species and overlooked the role of earthworms in the arid landscape. Further research is recommended to compare the impacts of different earthworms species on soil microbes and plant growth in various soil types, earthworm abundance, field conditions, organic residues locations, inorganic fertilizers, pesticides, fertile or non-fertile soils and diverse conditions of drought and moisture.     

Role and Variation of the Amount and Composition of Glomalin in Soil Properties in Farmland and Adjacent Plantations with Reference to a Primary Forest in North-Eastern China

The glycoprotein known as glomalin-related soil protein (GRSP) is abundantly produced on the hyphae and spores of arbuscular mycorrhizal fungi (AMF) in soil and roots. Few studies have focused on its amount, composition and associations with soil properties and possible land-use influences, although the data hints at soil rehabilitation. By choosing a primary forest soil as a non-degraded reference, it is possible to explore whether afforestation can improve degraded farmland soil by altering GRSP. In this paper, close correlations were found between various soil properties (soil organic carbon, nitrogen, pH, electrical conductivity (EC), and bulk density) and the GRSP amount, between various soil properties and GRSP composition (main functional groups, fluorescent substances, and elements). Afforestation on farmland decreased the EC and bulk density (p < 0.05). The primary forest had a 2.35–2.56-fold higher GRSP amount than those in the plantation forest and farmland, and GRSP composition (tryptophan-like and fulvic acid-like fluorescence; functional groups of C–H, C–O, and O–H; elements of Al, O, Si, C, Ca, and N) in primary forest differed from those in plantation forest and farmland (p < 0.05). However, no evident differences in GRSP amount and composition were observed between the farmland and the plantation forest. Our finding highlights that 30 years poplar afforestation on degraded farmland is not enough to change GRSP-related properties. A longer period of afforestation with close-to-nature managements may favor the AMF-related underground recovery processes.     

Mull and mor (müller-hesselman) in relation to the soil water regime of a forest

Summary The distribution of mull and mor, in an area which is believed to have borne forest for a number of centuries at least, led to investigations into the reasons for their development.Although the term forest-floor type has been substituted for humus type, mull and mor are used in the Müller-Hesselman sense.There appeared to be no obvious relationship between the distribution of the various forest-floor subtypes and the results of chemical analyses and pH determinations on soil samples.Where free CaCO₃ occurred in the A₁-horizon, a mull forest floor had developed even on coarse sand and the associated herb flora differed only slightly from that occurring on very acid mull. As the manner in which lime influences most soil processes is still unknown, the areas in which free CaCO₃ occurs were excluded from the investigations.Assessments of various other soil characteristics were made and the frequency of association of the various categories of these characteristics ascertained.It is concluded that the colour of the upper part of the A₁-horizon and its degree of leaching are related to its texture, and that the forest-floor subtypes are more closely related to soil texture than to soil colour or degree of leaching.     

Effects of Rapeseed Oil on the Rhizodegradation of Polyaromatic Hydrocarbons in Contaminated Soil

Plants have the ability to promote degradation of polycyclic aromatic hydrocarbons (PAHs) in contaminated soil by supporting PAH degrading microorganisms in the rhizosphere (rhizodegradation). The aim of this study was to evaluate if rapeseed oil increases rhizodegradation because various studies have shown that vegetable oils are able to act as extractants for PAHs in contaminated soils and therefore might increase bioavailability of PAHs for microbial degradation. In this study different leguminous and grass species were tested. The results suggested a significant impact of vegetable oil (1 and 3% w/w) on plant growth (decrease of plant height and biomass). The results of the pot experiment showed a decrease in the PAH content of the soil without amendment of rapeseed oil after six months. In soil amended with 1% and 3% of oil, there was no decrease in PAH content within this period. Although no enhancement of PAH degradation by plants could be measured in the bulk soil of the pot experiments, a rhizobox experiment showed a significant reduction of PAH content in the rhizosphere of alfalfa (Medicago sativa cv. Europe). Our investigations also showed significant differences in the degradation behaviour of the 16 individually analysed PAHs.     

全球变化背景下内蒙古草原土壤微生物多样性维持机制研究进展

全球变化对人类环境的影响是近几十年世界广泛关注的热点之一。内蒙古草原不仅是我国重要的牲畜和饲料生产基地, 而且有着不可替代的生态系统功能。土壤微生物是地球上多样性最高的生物类群, 在驱动碳氮循环等多种生态系统过程中发挥着至关重要的作用。由于研究技术的限制和群落结构复杂等原因, 土壤微生物生态学研究还处于描述性阶段, 理论研究还很缺乏。鉴于此, 利用分子生物学技术尤其是新一代测序技术, 从理论层面上系统地研究全球变化背景下我国北方草地微生物多样性的维持机制具有重要意义。本文在比较各种环境变化对土壤微生物群落的相对影响的基础上, 分析全球变化对微生物多样性影响的物理化学和生态学机制, 并对未来内蒙古草原微生物多样性的重点研究领域进行了展望, 包括: (1)加强全球变化多因素综合研究; (2)加强微生物多样性维持的生态学机制的研究; (3)加强地上与地下多样性关联机制的研究; (4)加强全球大尺度多生态系统的整合研究。     

Effects of Flooding and Drainage and their Alternation on the Growth and Uptake of Nutrients by Rice (Oryza sativa L., indica, var. IR-8)

Continuous flooding of the soil (‘flooded’ treatment)gave best growth of IR-8 variety of rice whereas soil drainedfor 4 weeks and then flooded for 8 (‘drained and flooded’treatment) resulted in poorest growth and chlorotic plants.Plants grown in the continuously drained soil (‘drained’treatment) and those in the soil flooded for 4 weeks and thendrained for 8 (‘flooded and drained’ treatment)showed intermediate growth. There were no differences in therelative water content of plants growing in the various treatments.Analyses of plant tissues showed that a consideration of therelative concentration of Fe, Mn, and P in the shoots is mostclosely related to the performance of rice under various culturalconditions. An increase in the concentration of Fe in the planttissues following flooding was correlated with the best growth(‘flooded’ treatment) unless it was accompaniedby high level of Mn (as in the ‘drained and flooded’treatment) which may have proved toxic, e.g. by interferencewith Fe metabolism as was evidenced by chlorosis. Measurementsof oxidation-reduction potentials, oxygen diffusion rates, andthe concentration of exchangeable and soluble Fe and Mn in thesoils have shown that the ‘drained and flooded’treatment caused the most extreme reducing conditions. Floodingaccompanied by the development of extreme reducing conditionsled to a greater accumulation of Mn in the shoots (‘drainedand flooded’ treatment) whereas flooding accompanied bythe maintenance of oxidizing conditions (‘flooded’treatment) resulted in a lower uptake of Mn. Growth of riceplants for 4 weeks in the drained soil did not fit them forthe reduced conditions which developed during subsequent flooding(‘drained and flooded’ treatment).     

Identification of the composite parameters of the BBH-B model specifying the effects of biohydrologic processes on the water balance of crop fields

A model of soil hydrology incorporating rainfall interception and macropore flow, which are representative biohydorologic processes, (BBH-B model) has two composite parameters, Π and Φ. These parameters express the ratios of rainfall interception and macropore flow to gross rainfall, respectively. Their values, however, change widely with the vegetation, soil texture and wetness. The results of experiments that have been carried out for various objectives under various conditions by the present authors were reanalyzed to evaluate these two parameters. Further, two supplemental experiments were designed to identify the two parameters. In the experiments, the monthly mean of Π for a cornfield ranged from 0.18 to 0.64 in the summer months, while Φ for a weed-grown field reached a maximum of 0.8 when daily rainfall was more than 40 mm day⁻¹. From these analyses and experiments, we concluded that the effects of biohydrologic processes on the water balance of crop fields are rather large and not negligible.     

Use of a genetically labelled strain for the analysis of Yersinia pseudotuberculosis population dynamics in natural soils

The Rifr mutant of Y. pseudotuberculosis, capable of producing pure cultures in media with a high content of rifampicin, has been used for an accurate quantitation of this microorganism in various kinds of natural (nonsterile) soil in controlled laboratory and field experiments. The main biological characteristics of the mutant have been identical to those of the parent strain. The first experiments have shown that the initially high concentration of Y. pseudotuberculosis in the soil gradually decreases in 2 months. The share of this microorganism in the natural microflora of the soil seems to be rather small, which probably explains the cause of low indices of spontaneous contamination of the soil in nature.     

Effect of soil K, Ca and Mg saturation and endomycorrhization on growth and nutrient uptake of sugar maple seedlings

Nutrient imbalances of declining sugar maple (Acer saccharum Marsh.) stands in southeastern Quebec have been associated with high exchangeable Mg levels in soils relative to soil K and Ca. A greenhouse experiment was set up to test the hypothesis that the equilibrium between soil exchangeable K, Ca, and Mg ions influences the growth and nutrient status of sugar maple seedlings. Also tested was whether endomycorrhization can alter nutrient acquisition under various soil exchangeable basic cations ratios. Treatments consisted of seven ratios of soil exchangeable K, Ca, and Mg making up a total base saturation of 58%, and a soil inoculation treatment with the endomycorrhizal fungus Glomus versiforme (control and inoculated), in a complete factorial design. Sugar maple seedlings were grown for 3 months in the treated soils. Plant shoot elongation rate, dry biomass and nutrient concentrations in foliage were influenced by the various ratios of soil cations. The predicted plant biomass and foliar K concentration were highest at a soil Ca saturation of 38%, a soil K saturation of 12%, and a soil Mg saturation of 8%. Potassium concentration in foliage was dependent on the level of Ca and Mg saturation in the soil when soil K saturation was close to 12%. Foliar Ca and Mg levels were more dependent on their corresponding levels in soil than foliar K. Colonization by G. versiforme did not influence seedling growth and macronutrient uptake. The results confirm that growth and nutrition of sugar maple are negatively affected by imbalances in exchangeable basic cations in soils.     

The Application of Soil Amendments to the Retardance of Rainwater-Leached Metals from CCA-Treated Wood Ash in Soil

The burning of wood treated with chromated copper arsenate (CCA) produces an ash that contains high concentrations of copper, chromium, and arsenic. The subsequent leaching of these metals from burn sites can produce soil and water contamination. Soils have varying natural abilities to reduce leaching and impact metals speciation and toxicity by sorption, conversion, and sedimentation-related mechanisms. Recent regulations have resulted in increased quantities of CCA-treated lumber entering the waste stream, making the study of metals leaching from ash, and the amendment of soils to more effectively immobilize metals, important areas of investigation.

The performance of various soil amendments to immobilize or retard Cu, Cr, and As species in soil/CCA-ash mixtures was studied. The amendments evaluated were agricultural lime (CaCO₃/MgCO₃), soil softener (CaSO₄ · 2H₂O), and iron sulfate (FeSO₄). Results of this investigation show that native soil alone retards the mobility of As and Cr, amendments applied alone or in combinations further retard metal mobility compared to the control soil/CCA-ash mixture. The CaSO₄ soil amendment is most effective in reducing the rainwater leaching of Cr and As from CCA-ash in soil reducing the mobility by 72.4% and 77.3%, respectively, compared to the control soil-ash mixture. Cu mobility is increased in the presence of the native soil and by all amendments.     

Increased soil nitrogen associated with dinitrogen-fixing, terricolous lichens of the genus Peltigera in northern Minnesota

Dinitrogen (N₂)-fixing lichens (cyanolichens) have long been recognized as a source of exogenous N in various ecosystems, yet the effects of nitrogen inputs from these lichens have been little studied. Cyanolichens of the genus Peltigera Willd. are often the dominant members of the earth-dwelling (terricolous) cyanolichen community. They occur in diverse habitats around the globe, but no studies of their influence on soil N have been reported.
We conducted field and laboratory investigations with the primary objective of determining whether soil N availability is increased near healthy thalli of terricolous dinitrogen-fixing lichens. We measured available soil N in situ with ion-exchange resin bags, potentially mineralizable N with laboratory incubations, total soil N, and soil temperature. Measurements were taken along transects that extended away from thalli of Peltigera, perpendicular to and parallel to topographic contours. Studies were conducted in ten types of forest across northern Minnesota, including two contrasting sites that represent extremes of habitat for Peltigera.
Soil N availability, potentially mineralizable N, and soil %N increased significantly with proximity to healthy thalli of Peltigera (P-values<0.05). Moreover, potential N mineralization was highly correlated with soil %N (R²=0.765). Our results suggest a potential zone of influence that extends 1.5 m from thalli of Peltigera. The data indicate that soil temperature is not a primary factor in these associations.     

Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra

The increasing temperature in Arctic tundra deepens the active layer, which is the upper layer of permafrost soil that experiences repeated thawing and freezing. The increasing of soil temperature and the deepening of active layer seem to affect soil microbial communities. Therefore, information on soil microbial communities at various soil depths is essential to understand their potential responses to climate change in the active layer soil. We investigated the community structure of soil bacteria in the active layer from moist acidic tundra in Council, Alaska. We also interpreted their relationship with some relevant soil physicochemical characteristics along soil depth with a fine scale (5 cm depth interval). The bacterial community structure was found to change along soil depth. The relative abundances of Acidobacteria, Gammaproteobacteria, Planctomycetes, and candidate phylum WPS-2 rapidly decreased with soil depth, while those of Bacteroidetes, Chloroflexi, Gemmatimonadetes, and candidate AD3 rapidly increased. A structural shift was also found in the soil bacterial communities around 20 cm depth, where two organic (upper Oi and lower Oa) horizons are subdivided. The quality and the decomposition degree of organic matter might have influenced the bacterial community structure. Besides the organic matter quality, the vertical distribution of bacterial communities was also found to be related to soil pH and total phosphorus content. This study showed the vertical change of bacterial community in the active layer with a fine scale resolution and the possible influence of the quality of soil organic matter on shaping bacterial community structure.     

土壤生物与土壤污染研究前沿与展望

随着社会经济发展,人类生产活动对自然环境产生越来越广泛深刻的影响,土壤污染已成为危及生态系统稳定、农产品质量安全和人体健康的突出环境问题之一。重金属、有机污染化合物、病原菌及抗性基因等各类污染物大量进入土壤后,对土壤生物系统造成毒害作用,影响到土壤生态功能;另一方面,土壤生物如细菌、真菌、土壤动物等在一定程度上能够适应土壤污染,深刻影响着污染物在土壤中的迁移转化过程,在土壤污染修复中具有潜在重要作用。从土壤污染的生态毒理效应、土壤生物对土壤污染的响应与适应机制、污染土壤修复原理与技术等三方面综述了土壤生物与土壤污染相关研究前沿,展望了重点研究方向。     

Biogeoenergetic description of soils in natural landscapes of Georgia

Energy consumed for soil formation and efficiency of solar energy utilization have been comparatively evaluated for various soil types in natural landscapes of Georgia. Soil formation proved to consume 16–87% of energy of the radiation balance at the surface, while cyclic biological processes consumed 0.162–1.344 kcal/(cm² year).     

Indicator based assessment of the soil compaction risk at arable sites using the model REPRO

Soil compaction impairs all essential soil functions, which are crucial for the lives of humans, animals, plants and soil organisms. In order to secure the various soil functions, soil compaction must be avoided. One successful method of preventing soil compaction could be based on the precautionary principle, and mathematical modelling might be used to support farmers or consultants when making decisions about husbandry operations. This paper presents a model which calculates an indicator and assesses the risk of soil compaction on arable land based on site-specific data including information on soil, weather and specific husbandry. The first step is to estimate the soil strength in response to soil stress for a topsoil (20 cm) and a subsoil (35 cm) layer. The estimations of these parameters take into account changes in soil moisture throughout the year. Soil strength compared with soil stress is used to calculate the indicator Soil Compaction Index (SCI) for each time the machinery passes over the soil. The results from the separate passes are then integrated for a comprehensive assessment of the risk of soil compaction at farm level. The model was validated in numerous trials. It was found that the calculated SCI was a good reflection of the actual change in soil structure. The model is already being applied on arable farms in Germany. As an example presented in this paper, the calculations for the subsoil at these farms result in low to medium compaction risks.     

Consumption of hydrocarbons by psychrotolerant degrader strains

Oil-oxidizing microorganisms have been sampled in various regions of Siberia and used in strain associations, which degrade n-alkanes of oil from various fields by 64–92% after 6 days of growth in a wide temperature range. These strains are salt-tolerant and psychrotolerant. They are compatible with aboriginal soil microflora. Promising results have been obtained in experiments on growing plants on oil-polluted soil purified with a biodegrader of this series.