Effects of the diatom-Emiliana huxleyi succession on photosynthesis, calcification and carbon metabolism by size-fractioned phytoplankton

Changes in the species composition, photosynthesis, calcification and size-fractionated carbon metabolism by natural phytoplankton assemblages were monitored in three mesocosms under different nutrient conditions during May 1993. In the 3 enclosures, the decline of the diatom-dominated assemblages was followed by the development of a bloom of the coccolithoporid Emiliania huxleyi. Highest growth of E. huxleyi was observed in the mesocosm with a high N : P ratio, suggesting this species is a good competitor at low phosphate concentrations. The transition from diatom- to E. huxleyi-dominated assemblages brought about a sharp reduction of the phytoplankton standing stock and carbon-specific photosynthetic rate. The relative contribution of the smaller size fraction to total photosynthesis increased as the succession progressed. Calcification rate and E. huxleyi cell-specified calcite production were highest during the early stages of development of the E. huxleyi bloom. Distinct changes in the patterns of ¹⁴C allocation into biomolecules were noticed during the diatom-E. huxleyi succession. The diatom-dominated assemblage showed high relative ¹⁴C incorporation into low molecular weight metabolites (LMWM), whereas proteins and, specially, lipids accounted for the largest proportion of carbon incorporation in the E. huxleyi bloom. The patterns of photoassimilated carbon metabolism proved to be strongly dependent on cellular size, as protein relative synthesis was significantly higher in the smaller than in the larger size fraction, irrespective of the nutrient regime and the successional stage. These results are discussed in relation to the ecological and physiological features of small phytoplankton.     

EMILIANIA HUXLEYI (PRYMNESIOPHYCEAE): NITROGEN‐METABOLISM GENES AND THEIR EXPRESSION IN RESPONSE TO EXTERNAL NITROGEN SOURCES1

The availability and composition of dissolved nitrogen in ocean waters are factors that influence species composition in natural phytoplankton communities. The same factors affect the ratio of organic to inorganic carbon incorporation in calcifying species, such as the coccolithophore Emiliania huxleyi (Lohman) W. W. Hay et H. Mohler. E. huxleyi has been shown to thrive on various nitrogen sources, including dissolved organic nitrogen. Nevertheless, assimilation of dissolved nitrogen under nitrogen‐replete and ‐limited conditions is not well understood in this ecologically important species. In this study, the complete amino acid sequences for three functional genes involved in nitrogen metabolism in E. huxleyi were identified: a putative formamidase, a glutamine synthetase (GSII family), and assimilatory nitrate reductase. Expression patterns of the three enzymes in cells grown on inorganic as well as organic nitrogen sources indicated reduced expression levels of nitrate reductase when cells were grown on NH₄⁺ and a reduced expression level of the putative formamidase when growth was on NO₃^?. The data reported here suggest the presence of a nitrogen preference hierarchy in E. huxleyi. In addition, the gene encoding for a phosphate repressible phosphate permease was more highly expressed in cells growing on formamide than in cells growing on inorganic nitrogen sources. This finding suggests a coupling between phosphate and nitrogen metabolism, which might give this species a competitive advantage in nutrient‐depleted environments. The potential of using expression of genes investigated here as indicators of specific nitrogen‐metabolism strategies of E. huxleyi in natural populations of phytoplankton is discussed.     

Utilization of Organic Nitrogen Sources by Two Phytoplankton Species and a Bacterial Isolate in Pure and Mixed Cultures

Algal production of dissolved organic carbon and the regeneration of nutrients from dissolved organic carbon by bacteria are important aspects of nutrient cycling in the sea, especially when inorganic nitrogen is limiting. Dissolved free amino acids are a major carbon source for bacteria and can be used by phytoplankton as a nitrogen source. We examined the interactions between the phytoplankton species Emiliania huxleyi and Thalassiosira pseudonana and a bacterial isolate from the North Sea. The organisms were cultured with eight different amino acids and a protein as the only nitrogen sources, in pure and mixed cultures. Of the two algae, only E. huxleyi was able to grow on amino acids. The bacterium MD1 used all substrates supplied, except serine. During growth of MD1 in pure culture, ammonium accumulated in the medium. Contrary to the expectation, the percentage of ammonium regenerated from the amino acids taken up showed no correlation with the substrate C/N ratio. In mixed culture, the algae grew well in those cultures in which the bacteria grew well. The bacterial yields (cell number) were also higher in mixed culture than in pure culture. In the cultures of MD1 and T. pseudonana, the increase in bacterial yield (number of cells) over that of the pure culture was comparable to the bacterial yield in mixed culture on a mineral medium. This result suggests that T. pseudonana excreted a more-or-less-constant amount of carbon. The bacterial yields in mixed cultures with E. huxleyi showed a smaller and less consistent difference than those of the pure cultures of MD1. It is possible that the ability of E. huxleyi to use amino acids influenced the bacterial yield. The results suggest that interactions between algae and bacteria influence the regeneration of nitrogen from organic carbon and that this influence differs from one species to another.     

Modelling interactions between phytoplankton and bacteria under nutrient-regenerating conditions

The interactions of phytoplankton and bacteria in a nitrogen-limitedsteady-state system with an organic nitrogen compound or ammoniumas the sole nitrogen source were modelled. The effects of variousalgal excretion rates and two different mathematical representationsof excretion were examined. The model predicted that higherexcretion elevated the bacterial steady-state biomass, and loweredthe algal biomass. Bacterial respiration, which directly determinednitrogen regeneration, had an important effect on the system.The bacterial growth yield in the model was mainly a functionof the growth rate, and not of the nitrogen:carbon ratio ofthe substrate. In one version of the model, where the excretionof organic carbon increased with decreasing growth rate, themodel started to oscillate when the multiplication product ofmaximum specific excretion of excreted organic carbon (EOC)and the bacterial yield on EOC exceeded the dilution rate, irrespectiveof the form of nitrogen (ammonium or dissolved organic nitrogen)in the medium. The model results were compared with chemostatexperiments with the alga Emiliania huxleyi and a bacterialisolate in pure and mixed culture at two different dilutionrates. The carbon and nitrogen biomass of the bacteria was {smalltilde}1.5 times higher in mixed culture than in pure culture.In the experiments with low dilution rate, the recovery of nitrogenin the form of biomass, ammonium or amino acids was low, suggestingthe excretion by the algae of a refractory nitrogen-containingproduct which the bacteria could not use.     

Nitrogen and Carbon Utilization in Alnus incana Fixing N2 or Supplied with NO3- at the Same Rate

The purpose of this study was (i) to evaluate biomass productionand nitrogen utilization in grey alder and (ii) to investigatecarbon utilization in alders fixing nitrogen or supplied withnitrate. Two experiments were made, each using two groups ofalders (Alnus incana (L.) Moench) growing in a climate chamber.In each experiment one group was inoculated with a local sourceof Frankia. The other group was not inoculated but receivednitrate in the same amount as the first group fixed nitrogen.Therefore, the rate of nitrate application increased duringthe experimental period. Biomass production, growth, nitrogencontent and nitrogen utilization were determined in one experiment.Growth, nitrate reductase activity, net photosynthesis and rootrespiration were measured in the second experiment. In experimentone there was no significant difference in biomass productionbetween the two groups of plants. Of the nitrate given 99% wastaken up and 1% of this uptake was excreted in an organic form.In the second experiment the plant development was similar innodulated and non-nodulated alders during the period studied.Nitrate reductase activity was found in both root- and shoot-tipsof the non-nodulated alders. At both days 24 and 30, the amountof carbon respired compared to the amount of carbon assimilatedwas similar for the nodulated alders as for the non-nodulatedalders. As nitrogen fixation increased, photosynthesis alsoincreased. Thus, there was an inter-relationship between netphotosynthesis and nitrogen fixation. Key words: Alnus-Frankia symbioses, carbon utilization, nitrogen (N₂ ) utilization     

The Complete Plastid Genome Sequence of the Haptophyte Emiliania huxleyi: a Comparison to Other Plastid Genomes

The complete nucleotide sequence of the plastid genome of thehaptophyte Emiliania huxleyi has been determined. E. huxleyiis the most abundant coccolithophorid and has a key role inthe carbon cycle. It is also implicated in the production ofdimethylsulphide (DMS), which is involved in cloud nucleationand may affect the global climate. Here, we report the plastidgenome sequence of this ecologically and economically importantspecies and compare its gene content and arrangement to otherknown plastid genomes. The genome is circular and consists of105,309 bp with an inverted repeat of 4,841 bp. In terms ofboth genome size and gene content E. huxleyi cpDNA is substantiallysmaller than any other from the red plastid lineage. The geneticinformation is densely packed, with 86.8% of the genome specifying110 identified protein-coding genes, 9 open reading frames,28 different tRNAs, and 3 rRNAs. A detailed comparison to otherplastid genomes, based on gene content, gene function, and genecluster analysis is discussed. These analyses suggest a closerelationship of the E. huxleyi cpDNA to the chlorophyll c-containingplastids from heterokonts and cryptophytes, and they supportthe origin of the chromophyte plastids from the red algal lineage.     

Regulation of bacterioplankton production and biomass in an oligotrophic cleanvater lake--the importance of the phytoplankton community

Estimations of bacterioplankton production and biomass werecarried out in enclosure experiments during two consecutiveyears (1989 and 1990) in oligotrophic clearwater Lake Njupfatet.The lake was limed in November 1989, and the experiments werecarried out both in 1989 (unlimed) and in 1990 (limed). Bags(3001) were manipulated with inorganic phosphorus and nitrogen,organic carbon, and metazoan zooplankton abundance. Both years,bacterial production was stimulated by inorganic nutrients aloneand in combination with organic carbon. However, the increasein bacterial production when inorganic nutrients were addedalone was much stronger in 1990 than in 1989. In 1989. bacterialproduction increased strongly only when inorganic nutrientsand organic carbon were added together. The phytoplankton communitywas dominated by the cyanobacterium Merismopedia tenuis-simaduring 1989, and the phytoplankton biomass increased only slightlywhen receiving inorganic nutrients. In 1990, when the lake hadbeen limed. M.tenuissima had completely disappeared and thephytoplankton community, dominated by Chrysophyceae and Chlorophyceae,responded strongly to additions of inorganic nutrients. Theincreased phytoplankton productivity in 1990 may have resultedin increased release of organic carbon, and this in turn thatthe carbon limitation of bacterioplankton production decreasedfrom 1989 to 1990. Zooplankton had a positive effect on bacterioplanktonproduction in 1989, but no effect in 1990. The loss of bacterialbiomass approximated 60% of the bacterial production in 1989,while in 1990 it almost equalled the bacterioplankton production.     

Effect of light regime upon growth rate and chemical composition of a clone of Skeletonema costatum from the Trondheimsfjord, Norway

Nutrient-saturated cultures of Skeletonema costatum were grownat 15C and 42 combinations of photon flux density (PFD) anddaylength. The growth rate increased with the daylength andPFD up to 460–630 µE m^–2 s^–1 (maximum2.5 doublings day At 2000 µE m^–2 s^–1 the growthrate was reduced by 45%. The chlorophyll (chl) content of thecells and the rate of production of carbon per unit chlorophylland ambient light increased for declining light regimes as didcellular nitrogen and carbon. The N/C ratio, cellular phosphorusand ratios between in vivo fluorescence, with and without DCMU,and chlorophyll varied negligibly. The ATP/C ratio was linearlyrelated to the growth rate. The results were described mathematically.The chl/C ratio was low both in strong light and in marginallylow light, corresponding to low cellular chlorophyll and highcellular carbon, respectively. The observed increase in cellularnitrogen and carbon at shade adaptation probably represent anincrease in the size of internal stores of organic nitrogenand may imply that Skeletonema cells become enriched with organicnitrogen when staying in nitrate-rich subsurface layers, e.g.in or below a nutricline. However, close to zero growth in marginallight the cells become greatly enriched with respect to everymeasured factor. Such cells may be physiologically resting stageswhich may ensure survival during dark periods and promote rapiddevelopment during the initial phase of blooms. Cultures andnatural blooms of Skeleronema in the Trondheimsfjord exhibitvery similar patterns of variation.     

Inter-strain differences in nitrogen use by the coccolithophore Emiliania huxleyi, and consequences for predation by a planktonic ciliate

Four strains of the coccolithophore Emiliania huxleyi (CCMP strains 370, 373, 374, 379) were tested for their ability to grow on various nitrogen sources. All strains grew on ammonium, nitrate, and urea, although growth of CCMP379 on urea was low. Responses to other dissolved organic nitrogen (DON) sources varied. CCMP379 did not grow on any DON source other than urea. All other strains grew on one of the two tested amino acids: CCMP370 and CCMP373 on glutamine, and CCMP374 on alanine. All three of these strains also grew on hypoxanthine; in addition, two grew well on acetamide and one on ethanolamine. E. huxleyi strains also differed in their susceptibility to predation by the ciliate Strobilidium sp. CCMP374 was ingested at substantially higher rates than CCMP373 regardless of E. huxleyi growth condition. Ciliate feeding rates also depended on E. huxleyi growth condition. For CCMP374, feeding rates were 2× higher on growing E. huxleyi cells than on non-growing cells (average 27.5 versus 15.6 cells ciliate⁻¹ h⁻¹, respectively). For CCMP373, a relationship between E. huxleyi growth rate and ciliate feeding rate was not evident, but E. huxleyi grown on some N sources (ammonium, nitrate, urea) were ingested at consistently higher rates than E. huxleyi grown on other sources (ethanolamine, glutamine). Interstrain differences in the ability to utilize DON and resist predation may contribute to maintenance of high genetic diversity within this cosmopolitan, bloom-forming species.     

Picocyanobacterial photosynthetic efficiency under Daphnia grazing pressure

Daphnia hyalina was used to assess the impact of zooplanktonon the photosynthetic activity of picocyanobacteria. A phosphorus-limitedlaboratory system was designed, composed of 3-µm filteredlake water with natural assemblages to which non-axenic Synechococcussp. was added. Different treatments with and without Daphniawere arranged; aliquots from these were sampled during 3-dayincubations to measure changes in picocyanobacterial net primaryproduction (NPP), excreted organic carbon (EOC), dissolved organiccarbon (DOC) and photosynthetic parameters (photosynthesis–irradianceresponse curves). Bacterial number, biovolume and productionwere measured in both the treatment and control to evaluatepossible bacterial interferences. A significant increase ofpicocyanobacterial photosynthesis and efficiency (2- and 3-foldincrease of P_max and respectively) was observed in bottlessupplemented with Daphnia, whereas cell-specific bacterial productiondid not. At the same time, the EOC:NPP ratio was 2.3 times lowerwith the grazer. This result clearly shows the impact of P recyclingmediated by a grazer on picocyanobacterial growth and production.     

CELL AND GROWTH CHARACTERISTICS OF TYPES A AND B OF EMILIANIA HUXLEYI (PRYMNESIOPHYCEAE) AS DETERMINED BY FLOW CYTOMETRY AND CHEMICAL ANALYSES1

Two morphotypes of Emiliania huxleyi (Lohmann 1902) Hay et al. 1967, types A and B, known to be unequally distributed in the oceans, were grown in dilution cultures at a range of photon flux densities (PFDs) (1.5–155 μmol photons·m^?2·s^?1) and two temperatures (10° and 15° C). Calcite carbon and organic carbon content of the cells as well as instantaneous growth rate, cell size, chlorophyll fluorescence, and light-scatter properties clearly depended on growth conditions and differed considerably for the two morphotypes. The ratio between calcite carbon and organic carbon production showed an optimum of 0.65 in E. huxleyi type A cells at PFD = 17.5. The ratio increased slightly with a temperature increase from 10° to 15°C but remained < 1.0 at both temperatures in light-limited cells. In contrast, calcite carbon production exceeded organic carbon production (ratio: 1.4–2.2) in phosphate-deprived cultures. Emiliania huxleyi type B generally showed a higher calcite carbon/organic carbon ratio than E. huxleyi type A, but the relation with PFD was similar. The content of calcite carbon and organic carbon as well as the instantaneous growth rate, cell size, chlorophyll fluorescence, and light-scatter properties showed large diel variations that were closely related to the division cycle. Our results show the importance of mapping the structure of any sampled cell population with respect to the phase in the cell division cycle, as this largely determines the outcome of not only “per cell” measurements but also short time (less than 24 h) flux measurements. For instance, dark production of calcite by E. huxleyi was negatively affected by cell division. Slowly growing (phosphate-stressed) cultures produced calcite in the light and in the dark. In contrast, rapidly growing cultures at 10°C produced calcite only in the light, whereas in the dark there was a significant loss of calcite due to dissolution.     

Fractionation of Nitrogen Isotopes during the Uptake and Assimilation of Ammonia by Plants

Two varieties (Nihonbare and Koshihikari) of rice plants (Oryzasativa L.) were grown hydro-ponically with two levels (20 and100 mg N liter ^–1) of ammonia. Variations in levels ofnatural abundance of ¹⁵N (¹⁵N) were analyzed in the ammoniaand organic nitrogen of shoots and roots, as well as in theammonia in the culture solution. There was substantial fractionationof nitrogen isotopes during the uptake of ammonia. When plantsabsorbed a large proportion of ammonia from a solution witha low concentration, less negative ¹⁵N values in plants andhigh positive ¹⁵N values in the ammonia remaining in solutionwere observed. The reverse was found when a smaller fractionof ammonia was absorbed from a solution with a higher concentrationof ammonia. The ^l5N values of ammonia in shoots and roots werehigher than in the respective constituent organic nitrogen,suggesting the fractionation of nitrogen isotopes during theassimilation of ammonia. Wild-type and mutant cells of the cyanobacterium(blue-green alga) Synechococcus PCC 7942 were grown in nitrate-or ammonia-containing medium as the source of nitrogen. Fractionationof nitrogen isotopes during the uptake of nitrate was limited,whereas that during the uptake of ammonia was considerable. ¹ In this report, the term ammonia refers indiscriminately toboth NH₃ or NH₄⁺. (Received June 13, 1991; Accepted September 12, 1991)     

Bloom of Emiliania huxleyi (Prymnesiophyceae) in the western South Atlantic Ocean

A monospecific bloom of the coccolithophorid Emiliania huxleyi(Lohmann) Hay & Mohler (Prymnesiophyceae) was detected offRio de La Plata at 36°S and 54°W in November 1989. Thecell densities observed were up to 6x10⁵ cells I^–1. Thisis the first record of a bloom of E.huxleyi in the area.     

Ecological significance of extracellular vesicles in modulating host-virus interactions during algal blooms

Extracellular vesicles are produced by organisms from all kingdoms and serve a myriad of functions, many of which involve cell-cell signaling, especially during stress conditions and host-pathogen interactions. In the marine environment, communication between microorganisms can shape trophic level interactions and population succession, yet we know very little about the involvement of vesicles in these processes. In a previous study, we showed that vesicles produced during viral infection by the ecologically important model alga Emiliania huxleyi, could act as a pro-viral signal, by expediting infection and enhancing the half-life of the virus in the extracellular milieu. Here, we expand our laboratory findings and show the effect of vesicles on natural populations of E. huxleyi in a mesocosm setting. We profile the small-RNA (sRNA) cargo of vesicles that were produced by E. huxleyi during bloom succession, and show that vesicles applied to natural assemblages expedite viral infection and prolong the half-life of this major mortality agent of E. huxleyi. We subsequently reveal that exposure of the natural assemblage to E. huxleyi-derived vesicles modulates not only host-virus dynamics, but also other components of the microbial food webs, thus emphasizing the importance of extracellular vesicles to microbial interactions in the marine environment.Subject terms: Virus-host interactions, Microbial ecology, Water microbiology     

Acclimation to low light intensity in photosynthesis and growth of Pseudo-nitzschia multiseris Hasle, a neurotoxigenic diatom

Pseudo-nitzschia multiseries, a neurotoxigenic diatom, was grownin batch culture at light intensities between 53 and 1100 µmolm^–2 s^–1. Cellular contents of carbon. nitrogen andchlorophyll a, and the relationship between photosynthesis andlight levels, were studied during exponential (day 4) and stationaryphases (day 12). In the stationary phase at low light, therewas an increase in cellular chlorophyll a and the initial slopeof P-I curves (^B), which permitted a photosynthetic assimilationof energy equivalent to that of cells grown at high light. Inpast incidents of domoic acid poisoning, this may have facilitateddomoic acid production at low light intensities.     

Culture conditions affecting biodegradation components of the brown-rot fungus<Emphasis Type="Italic"> Gloeophyllum trabeum</Emphasis>

To determine the liquid culture conditions under which the wood-degrading system of the brown-rot fungus Gloeophyllum trabeum is expressed, enzymes and metabolites from liquid and solid substrate cultures were characterized. Enzymes were analyzed by 2-D gel electrophoresis and also assayed. Growth conditions were varied by using liquid media containing: (1) low carbon, low nitrogen, (2) low carbon, high nitrogen, (3) high carbon, low nitrogen, or (4) high carbon, high nitrogen. The protein arrays expressed under the four conditions were very similar, and endo-1,4--glucanase (detected by 2-D gels) activity along with -glucosidase, xylanase, and NADH/quinone oxidoreductase activities were detected. Maximal expression of the hydrolytic enzymes was observed in high carbon/high nitrogen medium, whereas the highest oxidoreductase activity was in the high carbon low nitrogen medium. Oxalate and 2,5-dimethoxybenzoquinone were detected under all culture conditions, with higher production in high carbon/low nitrogen medium. Cultures grown in this medium also yielded the highest rate of hydroxylation of p-hydroxybenzoic acid, yielding protocatechuic acid, a product of hydroxyl radical attack.Abbreviations DMBQ 2,5-Dimethoxybenzoquinone - HC/HN High carbon/high nitrogen - HC/LN High carbon/low nitrogen - LC/HN Low carbon/high nitrogen - LC/LN Low carbon/low nitrogen     

Phytoplankton strategies and diversity under different nutrient levels and planktivorous fish densities in a shallow Mediterranean lake

Two mesocosm experiments were carried out to investigate thedynamic ef fects of nutrients (nitrogen and phosphorus) andplanktivorous fish additions on phytoplankton strategies anddiversity. The phylogenetic and functional approaches were usedto understand phytoplankton ecology in shallow Mediterraneanlakes. The experimental approach is new for the study of algalfunctional groups. Nutrient loading and fish stocks enhancedbiomass of small algae but decreased phytoplankton diversityand species richness. Faster species replacement and fluctuationsin diversity occurred above loadings of 1 µM P and 21µM N. Mesotrophic conditions favoured a diverse pool ofspecies, including nostocales and unicellular flagellate algae(functional groups S_n, S₁, L₀, Y, Reynolds et al., 2002). C-strategistchlorophytes (small algae from functional group X₁) dominatedmid-successional assemblages with good light and accessiblenutrients. High nutrient concentrations, dim light, presenceof organic matter and of larger zooplankton favoured to functionalgroups S₁ of oligophotic filamentous cyanobacteria and J ofmixotrophic Scenedemus species. Intermediate nutrient levelswith total phosphorus (TP) 10 µM, water quiescence, transparencyand smaller zooplankton prompted dominance of chroococcal cyanobacteria(functional groups X₁ and K). Resulting patterns agree and reinforcethe validity of plankton functional groups associated with warm,shallow enriched systems, although some changes in the groupsare suggested in relation to the structuring role of nutrientsand grazing on the functional scheme for phytoplankton.