Structures of the Mating-Type Loci of Cordyceps takaomontana

Nucleotide sequences of the mating-type loci MAT1-1 and MAT1-2 of Cordyceps takaomontana were determined, which is the first such report for the clavicipitaceous fungi. MAT1-1 contains two mating-type genes, MAT1-1-1 and MAT1-1-2, but MAT1-1-3 could not be found. On the other hand, MAT1-2 has MAT1-2-1. A pseudogene of MAT1-1-1 is located next to MAT1-2.     

Genetic specifics of the breeding of cotton varieties with cleistogamous flowers

As a prerequisite to studying the genetics and breeding of chasmogamous and cleistogamous flowers, a preliminary experiment was performed to estimate the extent of cross-pollination in cotton varieties and hybrids. Vicinism estimates varied from 0.53 to 15.36%, i.e., the proportion of cross-pollination was relatively high, leading to a biological contamination. As a result of such contamination, genetic collection lines and varieties lose genetic homogeneity and become heterozygous and genetically heterogeneous. The genetic control of the flower type was studied in the Gossipium hirsutum L. × G. barbadense L. interspecific hybrids, and phenotypic segregation of the 3: 1 and 15: 1 types with monogenic (3: 1) and digenic (15: 1) differences of noncumulative polymerization was observed. The corresponding types of genotypic segregation were 1: 2: 1 (1Cg ₁ Cg ₁ cg ₂ cg ₂ : 2Cg ₁ cg ₁ cg ₂ cg ₂ : 1cg ₁ cg ₁ cg ₂ cg ₂ ) and 1: 2: 2: 4: 1: 2: 1: 2: 1 (1) Cg ₁ Cg ₁ Cg ₂ Cg ₂ -1; (2) Cg ₁ Cg ₁ cg ₂ cg ₂ -2; (3) Cg ₁ cg ₁ Cg ₂ Cg ₂ -2; (4) Cg ₁ cg ₁ Cg ₂ cg ₂-4; (5) Cg ₁ Cg ₁ cg ₂ cg ₂ -1; (6) Cg ₁ cg ₁ cg ₂ cg ₂ -2; (7) cg ₁ cg ₁ Cg ₂ Cg ₂-1; (8) cg ₁ cg ₁ Cg ₂ cg ₂ -2; (9) cg ₁ cg ₁ cg ₂ cg ₂ -1. Genotypes (1)–(8) had chasmogamous flowers, while double-recessive genotype (9) had cleistogamous flowers. Based on this, genotypes with individual phenotypic expression were identified in F2, and their correlation with the most important morphological, biological, and agricultural features was studied. Special attention was paid to the productivity of hybrid plants intended for use in breeding to obtain intensive varieties. The study made it possible to isolate forms, families, genetic collection lines, and varieties with isogenic or nonisogenic determination of these characters and chasmogamous and cleistogamous flowers of G. hirsutum L. and G. barbadense L. prototypes by using original methods to examine the two types of flowers; the methods do not have analogs in cotton breeding worldwide.     

Faunistic and bibliographical inventory of the Psychodinae moth-flies of North Africa (Diptera,Psychodidae)

All published records for the 49 species of moth flies known from North Africa are reviewed and discussed: Morocco (27 species), Algeria (33 species), Tunisia (18 species) and Egypt (five species). In addition, records of seven species of Psychodinae new to the fauna of Morocco are added, of which three are new mentions for North Africa (Table ​(Table1)1) and one is a new record for Egypt. Telmatoscopus squamifer Tonnoir, 1922 is transferred to the genus Iranotelmatoscopus Ježek, 1987, comb. n. Satchelliella reghayana Boumezzough & Vaillant, 1987 is transferred to the genus Pneumia Enderlein, 1935, comb. n. Pneumia aberrans Tonnoir, 1922 is transferred to the subgenus Logima.

Table 1.

Species (in alphabetical order) of Psychodinae known from the North African countries. Libya has been omitted because no information exists in the literature from Libya.

The Interaction of knotted1 and thick tassel dwarf1 in Vegetative and Reproductive Meristems of Maize

In Arabidopsis, SHOOT MERISTEMLESS (STM) and CLAVATA1 (CLV1) competitively regulate meristem homeostasis. Here, we explore the interaction of their maize homologs knotted1 (kn1) and thick tassel dwarf1 (td1). kn1 mutants form fewer lateral organs and td1 inflorescences are fasciated with additional floral organs. Double mutants show kn1 epistatic to td1 in seedling and ear development but dose-sensitivity exists later to promote leaf initiation. Thus kn1 and td1 function in a pathway to maintain meristem homeostasis but their products may interact with different partners during development.     

Functional relationships between genes of the Shaker gene complex of Drosophila

Different mutations belonging to the HLI and HLII complementation groups of the haplolethal (HL) region of the Shaker complex (ShC) are described. The HLI complementation group includes viable (hdp), recessive lethals [l(1)1614], semidominant lethals [l(1)8384] and dominant lethals [l(1)5051,l(1)9916, l(1)13193], lack-of-function alleles that affect nervous system, cuticle and muscle development. The HLI complementation group encodes troponin I. HLII lack-of-function mutations [l(1)174 and l(l)4058] affect nervous system development. The semidominant lethal HLI mutation 1(1)8384 shows differential complementation with other mutations in the ME and HL regions of ShC. Thus, heterozygous combinations of l(1)8384 with ME mutations l(1)162 and l(1)387 are poorly viable. The same phenomenon is observed for heterozygotes of l(1)8384 with HL mutations l(1)1199, l(1)2288 and l(1)3014. These specific interactions indicate the existence of functional relationships among the genetic elements of ShC. The implications for the understanding of the functional organization of ShC are discussed.     

Positioning the expanded akirin gene family of Atlantic salmon within the transcriptional networks of myogenesis

Vertebrate akirin genes usually form a family with one-to-three members that regulate gene expression during the innate immune response, carcinogenesis and myogenesis. We recently established that an expanded family of eight akirin genes is conserved across salmonid fish. Here, we measured mRNA levels of the akirin family of Atlantic salmon (Salmo salar L.) during the differentiation of primary myoblasts cultured from fast-skeletal muscle. Using hierarchical clustering and correlation, the data was positioned into a network of expression profiles including twenty further genes that regulate myogenesis. akirin1(2b) was not significantly regulated during the maturation of the cell culture. akirin2(1a) and 2(1b), along with IGF-II and several igfbps, were most highly expressed in mononuclear cells, then significantly and constitutively downregulated as differentiation proceeded and myotubes formed/matured. Conversely, akirin1(1a), 1(1b), 1(2a), 2(2a) and 2(2b) were expressed at lowest levels when mononuclear cells dominated the culture and highest levels when confluent layers of myotubes were evident. However, akirin1(2a) and 2(2a) were first upregulated earlier than akirin1(1a), 1(1b) and 2(2b), when rates of myoblast proliferation were highest. Interestingly, akirin1(1b), 1(2a), 2(2a) and 2(2b) formed part of a module of co-expressed genes involved in muscle differentiation, including myod1a, myog, mef2a, 14-3-3β and 14-3-3γ. All akirin paralogues were expressed ubiquitously across ten tissues, although mRNA levels were regulated between cell-types and family members. Gene expression patterns were often highly correlated between akirin paralogues, suggesting that natural selection has maintained an intricate network of co-regulation among family members. We concluded that the Atlantic salmon akirin family performs a multifaceted role during myogenesis and has physiological functions spanning many cell-types.     

A mating-type factors of Coprinus cinereus have variable numbers of specificity genes encoding two classes of homeodomain proteins

We have identified the seven genes that constitute the A43 mating-type factor of Coprinus cinereus and compare the organisation of A43 with the previously characterised A42 factor. In both, the genes that trigger clamp cell development, the so-called specificity genes, are separated into α and β loci by 7 kb of noncoding sequence and are flanked by homologous genes α-fg and β-fg. The specificity genes are known to encode two classes of dissimilar homeodomain (HD1 and HD2) proteins and have different allelic forms which show little or no cross-hybridisation. By partial sequencing we identified a divergently transcribed HD1 (a1-2) and HD2 (a2-2) gene in the A43 α locus. a2-2 failed to elicit clamp cell development in three different hosts, suggesting that it is non-functional. a1-2 elicited clamp cells in an A42 host that has only an HD2 gene (a2-1) in its α locus, thus demonstrating that the compatible Aα mating interaction is between an HD1 and an HD2 protein. The A43 β locus contains three specificity genes, the divergently transcribed HD1 and HD2 genes b1-2 and b2-2 and a third HD1 gene (d1-1) that was shown by hybridisation and transformation analyses to be functionally equivalent to d1-1 in A42. An untranscribed footprint of a third A42 HD1 gene, c1-1, was detected between the A43 b2-2 and d1-1 genes by Southern hybridisation.     

Characterization of Chrysanthemum ClSOC1-1 and ClSOC1-2, homologous genes of SOC1

The MADS-box gene SOC1/TM3 (SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1/ Tomato MADS-box gene 3) is a main integrator in the Arabidopsis flowering pathway; its structure and function are highly conserved in many plant species. SOC1-like genes have been isolated in chrysanthemum, one of the most well-known ornamental plants, but it has not been well characterized thus far. We isolated and characterized ClSOC1-1 and ClSOC1-2, two putative orthologs of Arabidopsis SOC1, from the wild diploid chrysanthemum, Chrysanthemum lavandulifolium, to investigate the regulatory mechanisms of flowering time control in chrysanthemum. Expression analysis indicated that ClSOC1-1 and ClSOC1-2 were expressed in all examined organs/tissues (leaves, shoot apices, petioles, stems and roots) with different expression levels, and with high expression in the shoot apices and leaves during the early stage of floral transition. The expression levels of ClSOC1-1 and ClSOC1-2 in the shoot apices increased at different developmental stages with the highest expression levels after 7 days of short-day treatment. Overexpression of ClSOC1-1 and ClSOC1-2 in wild-type Arabidopsis resulted in early flowering, which was coupled with the upregulation of one of the flowering promoter genes LEAFY. Our results suggested that the ClSOC1-1 and ClSOC1-2 genes play an evolutionarily conserved role in promoting flowering in Chrysanthemum lavandulifolium and could serve as a vital target for the genetic manipulation of flowering time in the chrysanthemum.     

Introduction of perfluoroalkyl chain into the esterifying moiety of bacteriochlorophyll c in the green sulfur photosynthetic bacterium Chlorobaculum tepidum by pigment biosynthesis

The green sulfur photosynthetic bacterium Chlorobaculum (Cba.) tepidum was grown in liquid cultures containing perfluoro-1-decanol, 1H,1H,2H,2H-heptadecafluoro-1-decanol [CF₃(CF₂)₇(CH₂)₂OH] or 1H,1H-nonadecafluoro-1-decanol [CF₃(CF₂)₈CH₂OH], to introduce rigid and fluorophilic chains into the esterifying moiety of light-harvesting bacteriochlorophyll (BChl) c. Exogenous 1H,1H,2H,2H-heptadecafluoro-1-decanol was successfully attached to the 17²-carboxy group of bacteriochlorophyllide (BChlide) c in vivo: the relative ratio of the unnatural BChl c esterified with this perfluoroalcohol over the total BChl c was 10.3%. Heat treatment of the liquid medium containing 1H,1H,2H,2H-heptadecafluoro-1-decanol with β-cyclodextrin before inoculation increased the relative ratio of the BChl c derivative esterified with this alcohol in the total BChl c in Cba. tepidum. In a while, 1H,1H-nonadecafluoro-1-decanol was not attached to BChlide c in Cba. tepidum, which was grown by its supplementation. These results suggest that the rigidity close to the hydroxy group of the esterifying alcohol is not suitable for the recognition by the BChl c synthase called BchK in Cba. tepidum. The unnatural BChl c esterified with 1H,1H,2H,2H-heptadecafluoro-1-decanol participated in BChl c self-aggregates in chlorosomes.     

Characterization of the rich haplotypes of Viviparous-1A in Chinese wheats and development of a novel sequence-tagged site marker for pre-harvest sprouting resistance

Pre-harvest sprouting (PHS) reduces the quality of wheat (Triticum aestivum L.) and the economic value of the grain. Our previous studies characterized the haplotypes of Viviparous-1B (Vp-1B) and its association with PHS resistance in Chinese wheats. The objective of this study was to analyze the haplotypes of Viviparous-1A (Vp-1A) and Viviparous-1D (Vp-1D) in a collection of 103 widely-grown winter wheats in China, and their associations with PHS resistance. In total, 17 Vp-1A haplotypes were explored on chromosome 3A of bread wheat, and were located in three major regions, the third intron, fifth intron and sixth exon, and designated TaVp-1Aam, TaVp-1Aan, TaVp-1Aao, TaVp-1Abm, TaVp-1Abn, TaVp-1Agm, TaVp-1Ahm, TaVp-1Ahn, TaVp-1Aho, TaVp-1Aim, TaVp-1Ain, TaVp-1Aio, TaVp-1Ajm, TaVp-1Ajn, TaVp-1Akm, TaVp-1Alm and TaVp-1Aln, respectively. However, no allelic variation of Vp-1D was found in this set of germplasm. Based on the haplotypes explored and their average germination index values, a novel co-dominant sequence-tagged site marker of the TaVp-1A gene was developed and designated Vp1A3. In most cases, haplotype TaVp-1Agm was associated with higher resistance to PHS. By combining with our previously exploited Vp1B3 marker, the efficiency of marker-assisted selection for PHS-resistant varieties was improved. Moreover, while the haplotype combination of TaVp-1Aam and TaVp-1Ba was associated with greater PHS susceptibility, the haplotype combinations TaVp-1Agm and TaVp-1Bb, TaVp-1Agm and TaVp-1Ba, TaVp-1Aim and TaVp-1Bb, and TaVp-1Aam and TaVp-1Bb could confer higher PHS resistance and be used as potential parental lines for molecular marker-assisted wheat breeding for PHS resistance.     

Indole- and caffeine-resistant mutations of Schizophyllum commune are involved in the behavior of a class III B mating-type factor in trp1 cells

We have reported that a parental strain of Schizophyllun commune T11 (trp1) is fully compatible with a strain T37 (Bα1′β4, trp1), but indole- and caffeine-resistant mutants (In^R-13 and Caf^R-9 respectively) derived from the T11 are semicompatible with the same T37. The compound-resistant mutations, ind1 and cfn1, were linked to neither A nor B mating-type factors. In^R-13, Caf^R-9, and all of indole- and caffeine-resistant progenies (ind1, trp1; cfn1, trp1) were semicompatible with the T37, and compatible with a strain T40 (Bα1′β4, TRP1) although the T40 contained the same class III B mating-type factor as the T37. The In^R-13 and Caf^R-9 were also semicompatible with any tester strains (Bα1′β4, trp1) developed, and the resulting heterokaryons produced non-aggregated and semiaggregated masses of hyphae, respectively. In the mutant heterokaryons, nuclei were distributed irregularly especially in case of [trp1/trp1] background; anucleate, uninucleate, binucleate and multinucleate cells were found with modified hyphae which contained a different type of septation (pseudoclamps and simple septa other than true clamps). We concluded that the ind1 and cfn1 mutations alter the normal behavior of one of class III B mating-type factors in Trp⁻ cells.     

Transcriptional profiling of the early stages of germination in Candida albicans by real-time RT-PCR

By using real-time RT-PCR, we profiled the expression of CGR1, CaMSI3, EFG1, NRG1, and TUP1 in Candida albicans strains JCM9061 and CAI4 under several conditions, including induction of morphological transition, heat shock, and treatment with calcium inhibitors. Expression of CaMSI3 changed under these growth conditions except during heat shock. CGR1 expression increased during the early stages of hyphal growth in JCM9061, while expression was strain-dependent during heat shock. Both EFG1 and NRG1 were similarly expressed under hypha-inducing conditions and heat shock. Expression of TUP1 was slightly different from the expression of EFG1 or NRG1.     

Three members of the S multigene family are linked to the S locus of Brassica

Two self-incompatibility genes in Brassica, SLG and SRK (SLG encodes a glycoprotein; SRK encodes a receptor-like kinase), are included in the S multigene family. Products of members of the S multigene family have an SLG-like domain (S domain) in common, which may function as a receptor. In this study, three clustered members of the S multigene family, BcRK1, BcRL1 and BcSL1, were characterized. BcRK1 is a putative functional receptor kinase gene expressed in leaves, flower buds and stigmas, while BcRL1 and BcSL1 are considered to be pseudogenes because deletions causing frameshifts were identified in these sequences. Sequence and expression pattern of BcRK1 were most similar to those of the Arabidopsis receptor-like kinase gene ARK1, indicating that BcRK1 might have a function similar to that of ARK1, in processes such as cell expansion or plant growth. Interestingly, the region containing BcRK1, BcRL1 and BcSL1 is genetically linked to the S locus and the physical distance between SLG, SRK and the three S-related genes was estimated to be less than 610 kb. Thus the genes associated with self-incompatibility exist within a cluster of S-like genes in the genome of Brassica.     

Coordination of Initiation of Nuclear Division and Initiation of Cell Division in Schizosaccharomyces pombe: Genetic Interactions of Mutations

sep1⁺ encodes a Schizosaccharomyces pombe homolog of the HNF-3/forkhead family of the tissue-specific and developmental gene regulators identified in higher eukaryotes. Its mutant allele sep1-1 causes a defect in cytokinesis and confers a mycelial morphology. Here we report on genetic interactions of sep1-1 with the M-phase initiation mutations wee1⁻, cdc2-1w, and cdc25-22. The double mutants sep1-1 wee1⁻ and sep1-1 cdc2-1w form dikaryon cells at high frequency, which is due to nuclear division in the absence of cell division. The dikaryosis is reversible and suppressible by cdc25-22. We propose that the genes wee1⁺, cdc2⁺, cdc25⁺, and sep1⁺ form a regulatory link between the initiation of mitosis and the initiation of cell division.