Captive breeding—a useful tool in the preservation of biodiversity?

Within the next decades species extinction may eliminate between 20 and 50% of the Earth's species. Captive breeding has often been claimed to be a useful tool in preservation of biodiversity. The role of zoos in conservation work and the value of captive breeding are discussed; the latter exemplified by the Peregrine Falcon (Falco peregrinus) Programme and the Arabian oryx (Oryx leucoryx) Programme. Captive breeding programmes are very resource demanding and can only be afforded for a very small number of species, which limits their value significantly. Zoos deal mainly with vertebrates, but these comprise less than 3% of the described species, and although the 878 zoos considered hold more than 20 000 specimens of 140 threatened mammal species, they probably only contribute to the conservation of 20 full species. The situation for birds, reptiles and amphibians is even worse. Zoos face serious problems with minimum viable population sizes and hybridization. However, zoos can make a major contribution to preservation of biodiversity through educating and informing the public. Today, where the crisis of extinction of species has reached such daunting dimensions, captive breeding and otherex situ conservation tools should be the last resort for preserving biodiversity, and captive breeding must not become an excuse to avoid dealing with preservation of habitats.     

Use of molecular markers in breeding for soluble solids content in tomato — a re-examination

Summbary Through earlier breeding efforts, portions of the genome of the wild species Lycopersicon chmielewskii have been introgressed into the cultivated tomato (Rick 1974). These introgressed chromosomal segments have been reported to increase soluble solids in fruit of certain tomato varieties (Rick 1974). Recently, two of the introgressed segments have been identified with RFLP markers and tested for effects on soluble solids in a single F2 population (Osborn et al. 1987). Based on results from that experiment, it was determined that one of the detected segments contains gene(s) controlling soluble solids and concluded that tomato varieties could be improved for this character by indirect selection for the linked RFLP marker (Osborn et al. 1987). In this report, we have independently tested the association between RFLP and isozyme markers and genes controlling soluble solids and other characters in the above described material. These experiments differ from the previous ones in that a set of 132 molecular markers (isozymes and DNA clones) of known chromosomal position have been used. Three introgressed chromosomal segments from L. chmielewskii have been identified using these markers. They map to the middle and the end of chromosome 7 (> 40 cM apart) and to the end of chromosome 10. The effects of these segments on soluble solids and other horticultural characters were tested in crosses with three different cultivars over a period of two years. Two of the three segments were found to increase soluble solids, however the effect of one of these was dependent on genetic background. Both segments were found to be associated with deleterious characters including increase in fruit pH, lower yield and small fruit. These results confirm the utility of molecular markers for detecting genes underlying quantitative variation but demonstrate the danger in establishing breeding programs around such linkages until the effects of the quantitative genes have been tested in a variety of genetic backgrounds and for associated effects on other characters of agronomic importance.     

Spatial variation in local pollen flow and mating success in a Picea abies clone archive and their implications for a novel ��breeding without breeding�� strategy

Currently, Norway spruce (Picea abies) breeding in Sweden is based on crosses between the best clones followed by clonal testing of the progenies to select for the long-term breeding population. An alternative breeding strategy called “Breeding without Breeding” (BwB) is proposed, which, in principle, relies on the DNA marker-based pedigree reconstruction from wind-pollinated progenies instead of controlled crosses. To test whether the pedigree structure could be established from progenies of clonal trials, we investigated the spatial pattern of local pollen flow and paternity assignment in a clone archive of Norway spruce. The results showed that 42% of the progeny can be assigned to fathers within 30-m distance with high confidence. Effective pollen dispersal decreased rapidly with distance and followed exponential distribution on local scale. The extent of close-neighbor (within 6 m) mating ranged from 0% to 48% among grafts with an average of 13%. Distance explained 25% deviance in mating success, and other factors such as phenology and spatial configuration of the clones should have contributed the rest. The success of parentage assignment in clone archive opens up the possibility to apply BwB in clonal trials of species that are easy to propagate vegetatively. This procedure could substantially shorten the breeding cycle and still give similar gain per year as the conventional breeding.     

Method learning caused a first‐time observer effect in a newly started breeding bird survey

Capsule A first‐time observer effect in the new French breeding bird survey (BBS) was found to result from new observers learning how to use the point count method on randomly selected sites.

Aims To estimate the first‐year effect in a newly started BBS, to look for correlates and test for a temporal trend in learning.

Methods Trends of 105 species were estimated using data from 2001–2007 obtained by 1100 observers conducting point counts over 1535 randomly selected squares. I estimated the average increase in detected numbers between the first and all subsequent years of survey at a site.

Results Observers counted 4.3% more birds in subsequent years than during the initial year of survey. This first‐year effect decreased from 2001 to 2007 (by an average of 2% per year). It was not related to most variables known to influence species detection probability. Only species with songs of lower sound frequencies (ranging from 0.5 to 8 kHz here) displayed a greater increase in locally detected numbers.

Conclusion The detected first‐year effect was the result of method learning by new observers who had not previously conducted point counts or visited randomly selected sites. The learning effect was larger for species with songs of lower sound frequency which are harder to hear during the dawn chorus.     

Divorce in cooperatively breeding long-tailed tits: a consequence of inbreeding avoidance?

The decision of whether to divorce a breeding partner between reproductive attempts can significantly affect individual fitness. In this paper, we report that 63% of surviving pairs of long-tailed tits Aegithalos caudatus divorced between years. We examine three likely explanations for the high divorce rate in this cooperative breeder. The 'better option' hypothesis predicts that divorce and re-pairing increases an individual's reproductive success. However, divorcees did not secure better partners or more helpers and there was no improvement in their reproductive success following divorce. The 'inbreeding avoidance' hypothesis predicts that females should disperse from their family group to avoid breeding with philopatric sons. The observed pattern of divorce was consistent with this hypothesis because, in contrast to the usual avian pattern, divorce was typical for successful pairs (81%) and less frequent in unsuccessful pairs (36-43%). The 'forced divorce' hypothesis predicts that divorce increases as the number of competitors increases. The pattern of divorce among failed breeders was consistent with this hypothesis, but it fails to explain the overall occurrence of divorce because divorcees rarely re-paired with their partners' closest competitors. We discuss long-tailed tits' unique association between divorce and reproductive success in the context of dispersal strategies for inbreeding avoidance.     

Genome editing in livestock: Are we ready for a revolution in animal breeding industry?

Genome editing is a powerful technology that can efficiently alter the genome of organisms to achieve targeted modification of endogenous genes and targeted integration of exogenous genes. Current genome-editing tools mainly include ZFN, TALEN and CRISPR/Cas9, which have been successfully applied to all species tested including zebrafish, humans, mice, rats, monkeys, pigs, cattle, sheep, goats and others. The application of genome editing has quickly swept through the entire biomedical field, including livestock breeding. Traditional livestock breeding is associated with rate limiting issues such as long breeding cycle and limitations of genetic resources. Genome editing tools offer solutions to these problems at affordable costs. Generation of gene-edited livestock with improved traits has proven feasible and valuable. For example, the CD163 gene-edited pig is resistant to porcine reproductive and respiratory syndrome (PRRS, also referred to as “blue ear disease”), and a SP110 gene knock-in cow less susceptible to tuberculosis. Given the high efficiency and low cost of genome editing tools, particularly CRISPR/Cas9, it is foreseeable that a significant number of genome edited livestock animals will be produced in the near future; hence it is imperative to comprehensively evaluate the pros and cons they will bring to the livestock breeding industry. Only with these considerations in mind, we will be able to fully take the advantage of the genome editing era in livestock breeding.     

Protoplast fusion — a tool for genetic manipulation and breeding in industrial microorganisms

Protoplasts can be isolated from microbial cells by enzymatic digestion of the cell wall, in the presence of an osmotic stabilizer. Such protoplasts can be induced to fuse in the presence of agents such as the poly (ethylene glycols). When suitably selected auxotrophic strains are used, the fusion products can be recovered by selection on the basis of nutritional complementation. Cultivation of the protoplasts on a hypertonic growth medium induces regeneration of new cell wall material and their subsequent reversion to the normal cell form of the organism. The protoplast fusion technique has been applied sucessfully to both bacterial and fungal systems leading to the recovery of recombinant progeny. In the fungi, the recovery of non-parental segregants from inter-species crosses has also been demonstrated. In assessing the value of the fusion technique, caution may be necessary at this stage in its application to genetic mapping in bacteria. The behaviour of protoplasts, especially with respect to reversion, could be an additional factor that operates during selection, distorting recombination frequencies. However, the fusion technique, in providing a mechanism by which genetic recombination can be readily achieved, should be of great potential in empirical breeding and strain improvement. These aspects are reviewed.     

Are European starlings breeding in the Azores archipelago genetically distinct from birds breeding in mainland Europe?

The European starling (Sturnus vulgaris) has recently been found to eat eggs of the endangered roseate tern (Sterna dougallii) in the Azores. Azorean starlings are considered an endemic subspecies (S. vulgaris granti), so we investigated how much genetic divergence has accumulated between the Azores and other European populations in order to assess whether lethal control measures might be possible, as previous experiments have found that taste aversion is not likely to be successful. For this purpose, we sequenced a region of the protein-coding mitochondrial gene ND2 for samples from six different populations. Of the 1,026 base pairs sequenced, 19 (1.7%) were variable and formed 15 different haplotypes. The Azores had high and significant genetic differentiation from all the other populations studied. Haplotype diversity was high in the mainland populations studied, ranging from 0.767 to 0.900, but there was no variation among the Azores samples, which were collected from a geographically broad region. Given the lack of genetic variability in the Azores birds and their abundance throughout the archipelago, lethal control on a local basis and as part of an integrated control plan can be seen as a reasonable measure to protect tern colonies.     

Pollination patterns and plant breeding systems in the Galápagos: a review

Background

Despite the importance of the Galápagos Islands for the development of central concepts in ecology and evolution, the understanding of many ecological processes in this archipelago is still very basic. One such process is pollination, which provides an important service to both plants and their pollinators. The rather modest level of knowledge on this subject has so far limited our predictive power on the consequences of the increasing threat of introduced plants and pollinators to this unique archipelago.

Scope

As a first step toward building a unified view of the state of pollination in the Galápagos, a thorough literature search was conducted on the breeding systems of the archipelago''s flora and compiled all documented flower–visitor interactions. Based on 38 studies from the last 100 years, we retrieved 329 unique interactions between 123 flowering plant species (50 endemics, 39 non-endemic natives, 26 introduced and eight of unknown origin) from 41 families and 120 animal species from 13 orders. We discuss the emergent patterns and identify promising research avenues in the field.

Conclusions

Although breeding systems are known for <20 % of the flora, most species in our database were self-compatible. Moreover, the incidence of autogamy among endemics, non-endemic natives and alien species did not differ significantly, being high in all groups, which suggests that a poor pollinator fauna does not represent a constraint to the integration of new plant species into the native communities. Most interactions detected (approx. 90 %) come from a single island (most of them from Santa Cruz). Hymenopterans (mainly the endemic carpenter bee Xylocopa darwinii and ants), followed by lepidopterans, were the most important flower visitors. Dipterans were much more important flower visitors in the humid zone than in the dry zone. Bird and lizard pollination has been occasionally reported in the dry zone. Strong biases were detected in the sampling effort dedicated to different islands, time of day, focal plants and functional groups of visitors. Thus, the existing patterns need to be confronted with new and less biased data. The implementation of a community-level approach could greatly increase our understanding of pollination on the islands and our ability to predict the consequences of plant invasions for the natural ecosystems of the Galápagos.     

Cooperative breeding: a question of climate?

In some species, including humans, parents receive help with offspring care. A new comparative study suggests that birds breed cooperatively when environmental conditions vary. Further empirical and theoretical work will be required to understand the evolutionary significance of this insight.     

Reappraising the theme of breeding systems in Echinococcus: is outcrossing a rare phenomenon?

Selfing has been considered the most common mode of reproduction in Echinococcus flatworms. However, population genetic studies on the asexual larval stage involving nuclear co-dominant markers have not always revealed significant heterozygote deficiencies--the expected outcome of a regularly and highly inbred population. In this study, we analysed the genetic structure of Echinococcus granulosus sensu lato populations from Southern Brazil during their adult (sexual) stage using 1 mitochondrial and 1 nuclear marker (cox 1 and mdh, respectively). We show that parasite genetic differentiation is largest among definitive hosts (domestic dogs) from different farms, suggesting that transmission is mostly maintained within a farm. Moreover, we show that heterozygote deficiencies are not significant, and we suggest that outbreeding is the most common mode of reproduction of the parasite in that region.     

All you can eat: is food supply unlimited in a colonially breeding bird?

Food availability is generally considered to determine breeding site selection and therefore plays an important role in hypotheses explaining the evolution of colony formation. Hypotheses trying to explain why birds join a colony usually assume that food is not limited, whereas those explaining variation in colony size suggest that food is under constraint. In this study, we investigate the composition and amount of food items not eaten by the nestlings and found in nest burrows of colonially nesting European bee‐eaters (Merops apiaster). We aimed to determine whether this unconsumed food is an indicator of unlimited food supply, the result of mistakes during food transfer between parents and chicks or foraging selectivity of chicks. Therefore, we investigated the amount of dropped food for each nest in relation to reproductive performance and parameters reflecting parental quality. Our data suggest that parents carry more food to the nest than chicks can eat and, hence, food is not limited. This assumption is supported by the facts that there is a positive relationship between dropped food found in a nest and the number of fledglings, nestling age, and chick health condition and that the amount of dropped food is independent of colony size. There is variation in the amount of dropped food within colonies, suggesting that parent foraging efficiency may also be an important determinant. Pairs nesting in the center of a colony performed better than those nesting on the edge, which supports the assumption that quality differences between parents are important as well. However, dropped food cannot be used as an indicator of local food availability as (1) within‐colony variation in dropped food is larger than between colony variation and, (2) the average amount of dropped food is not related to colony size.     

Grooming as a reward? Social function of grooming between females in cooperatively breeding marmosets

Classical models of grooming predict that subordinate primates will direct grooming towards dominants to receive coalitionary support from them. In contrast, recent reviews suggest that grooming asymmetries can change with social system and ecological conditions and should reflect asymmetries in services provided by different members of the dyad. We studied grooming patterns between females in six wild groups of common marmosets, Callithrix jacchus, to investigate the relation between social structure and grooming between females in a cooperatively breeding species. We observed grooming frequently and consistently in all study groups. Breeding females groomed nonbreeding females more than vice versa, and grooming between breeding and nonbreeding females was not related to agonistic behaviour. Our results provide some support to the hypothesis that grooming asymmetries are related to differences in services provided by different group members. We suggest that, in cooperatively breeding systems, breeding females may use grooming as an incentive for helper females to stay in the group.     

Why do some adult birds skip breeding? A hormonal investigation in a long-lived bird

Skipping reproduction is often observed in long-lived organisms, but proximate mechanisms remain poorly understood. Since young and/or very old snow petrels (Pagodroma nivea) commonly skip breeding, we tested whether they are physiologically able to breed during the pre-laying stage. To do so, we measured the ability of known-age (11-45 years old) petrels to release luteinizing hormone (LH, a crucial driver for breeding), by injecting exogenous gonadotropin-releasing hormone (GnRH). Although young petrels exhibited low baseline LH levels, they were able to elevate LH levels after a GnRH challenge. Moreover, young and very old petrels showed a stronger decrease in LH levels after the 10 min post-GnRH injection compared with middle-aged petrels. Birds that skipped breeding were as able as breeders to release LH after a GnRH challenge, indicating that they had functional pituitaries. However, the decision to skip reproduction was linked to a strong LH decrease after the 10 min post-GnRH injection. Our result suggests that the youngest and the oldest petrels fail to maintain elevated baseline LH levels, thereby do not initiate reproductive activities. Skipping reproduction in long-lived birds probably results from age-related changes in the dynamics of the hypothalamic-pituitary-gonadal (HPG) axis function.     

Spatial distribution of communal nests in a colonial breeding bird: benefits without costs?

Abstract The spatial organization of individuals, or groups of individuals, within a population can provide valuable information about social organization and population dynamics. We analysed the spatial distribution of nests of the sociable weaver (Philetairus socius) on two farms in the Kalahari. Sociable weavers build large communal nests on big savannah trees, forming a pattern of trees with and without nests. We used two spatial statistics, Ripley's K and the pair correlation function, to describe characteristics of the point patterns over a range of distances. (i) At distances of 200 and 300 m, communal nests were clustered. (ii) At distances greater than 1000 m, communal nests were regularly distributed. These findings are independent of the spatial distribution of trees. Furthermore, we used Moran's I to analyse spatial autocorrelation of nest sizes. We expected negative autocorrelation because of competition between nests. But on both farms there was no significant autocorrelation of nest sizes for any distance class. The regular distribution observed at larger distances may indicate competition and/or territoriality among different nests, but the lack of spatial autocorrelation between nest sizes suggests that these interactions may happen between nest clusters rather than between single nests. This was confirmed by significant clustering of nests on small scales. We thus suggest, that colonies of P. socius consist of several nests on adjacent trees forming a cluster of subcolonies. The question why sociable weavers establish subcolonies instead of adding more chambers to the natal nest, could not simply be answered by limitation of nesting space. We suggest a strategy to avoid costs due to increasing colony size.     

Cooperative breeding in South American hunter–gatherers

Evolutionary researchers have recently suggested that pre-modern human societies habitually practised cooperative breeding and that this feature helps explain human prosocial tendencies. Despite circumstantial evidence that post-reproductive females and extra-pair males both provide resources required for successful reproduction by mated pairs, no study has yet provided details about the flow of food resources by different age and sex categories to breeders and offspring, nor documented the ratio of helpers to breeders. Here, we show in two hunter–gatherer societies of South America that each breeding pair with dependent offspring on average obtained help from approximately 1.3 non-reproductive adults. Young married males and unmarried males of all ages were the main food providers, accounting for 93–100% of all excess food production available to breeding pairs and their offspring. Thus, each breeding pair with dependants was provisioned on average by 0.8 adult male helpers. The data provide no support for the hypothesis that post-reproductive females are the main provisioners of younger reproductive-aged kin in hunter–gatherer societies. Demographic and food acquisition data show that most breeding pairs can expect food deficits owing to foraging luck, health disabilities and accumulating dependency ratio of offspring in middle age, and that extra-pair provisioning may be essential to the evolved human life history.     

Habitat does not influence breeding performance in a long‐term Barn Owl Tyto alba study

Capsule This study examines the relationship between habitat variables and various aspects of breeding and foraging performance for 257 Barn Owl breeding attempts involving both released and wild birds, at 86 different nest‐sites over a 14‐year period.

Aims The study aimed to: (1) provide evidence for or against the importance of foraging habitat in Barn Owl breeding performance; (2) enable identification of areas which can, and those which cannot, be expected to sustain Barn Owl populations; (3) inform the compilation of any future guidelines such that Barn Owl release schemes are more likely to succeed; and (4) allow the revision of untested concerns in terms of the likely survival or otherwise of Barn Owls in a given area.

Methods Three data sources are used to assess the proportions of various habitat types and lengths of linear features in the vicinity of each nest: (1) The Centre for Ecology and Hydrology Land Cover Map; (2) Ordnance Survey Strategi dataset; and (3) Agricultural Census data. These are linked to various aspects of breeding performance.

Results Despite the size of the dataset, the number of significant correlations between habitat type and aspects of Barn Owl breeding success was similar to that expected by chance. Sites with more unimproved grassland within 1 km of the nest did not differ from those with less, except by a significant advancement of first‐egg date.

Conclusion The paucity of significant results may be evidence that Barn Owls are in fact rather catholic and adaptable in their habitat requirements, and not as dependent upon large areas of Field Vole (or other) habitat as has often been stated.     

Rainfall preceding egg-laying — a factor of breeding success in Common Terns (Sterna hirundo)

Summary The temporary reduction of clutch size, egg size and breeding success of the Common Tern during the breeding period of 1983 at the Lower Saxonian Wadden Sea (West Germany) was correlated with heavy rainfalls on the days preceding egg-laying (Figs. 2–4). Possible effective mechanisms and the result that the reduction of clutch size was not observed for colonies at the mainland coast are being discussed (Fig. 4).Supported by the Deutsche Forschungsgemeinschaft