Identifying new buffer areas for conserving waterbirds in the Mediterranean basin: the importance of the rice fields in Extremadura,Spain

The impact of wetland loss on migratory waterbirds can be mitigated by the presence of anthropogenic habitats such as rice fields. In the Mediterranean basin, wetlands have been drained and altered to such a degree that their very existence is threatened. It is, therefore, essential to identify key buffer areas in the basin to develop conservation strategies for migratory waterbirds. In Extremadura, continental SW Spain, 30,000 ha of new rice fields have created since the 1960s. The present study describes for the first time the waterbird community associated with these inland rice fields, and addresses the question of the potential value of this area in buffering the loss of natural wetlands for populations of waterbirds using the East Atlantic Flyway (EAF). The waterbird community studied consisted of 45 species, with population levels reaching values of international importance (>1% of the biogeographical population using EAF) for the Common Crane Grus grus (19%), Black-tailed Godwit Limosa limosa (1.2%), Black-winged Stilt Himantopus himantopus (1.2%), and Cattle Egret Bubulcus ibis (1%). The presence of these rice fields may be modifying the wintering and/or feeding sites of some waterbird species such as the Common Crane and Black-tailed Godwit. Unfortunately, there is no legal protection for this area. We propose the designation of these rice fields as a Special Protection Area for birds.     

Spatial and temporal variability in epilithic biofilm bacterial communities along an upland river gradient

Riverine biofilms remain one of the least-studied habitats despite the significant increase in the examination of aquatic microbial communities in recent years. In this study, the dynamics of epilithic biofilm communities native on rocks from a low-order upland stream were examined over a period of 3 years. Spatial and temporal variations in bacterial communities were assessed using terminal restriction fragment length polymorphism, based on analysis of the 16S rRNA gene. In total, 108 epilithic biofilm samples were analysed and 170 different ribotypes were detected. A strong temporal gradient in ribotype composition was noticed, especially between samples collected in 2001 and those collected in 2002 and 2003, most likely reflecting interannual differences in weather conditions, such as temperature. A spatial gradient in ribotype composition, from upstream sites to the low-lying sites, was also evident and interpreted as an environmental variation gradient along the river course. Distinct biofilm communities consistently occurred at the first site along the river, which was significantly correlated to low pH. Temporal factors explained the highest degree of variation within the epilithic biofilms. Recurrent blooms of certain bacteria were noted within the system. Phylogenetic relationships of bacteria at one point in the river were determined using a cloning and sequencing approach, with Alphaproteobacteria dominating the community, followed by Cyanobacteria, Bacteroidetes and Betaproteobacteria.     

Spatial and temporal variability among marine Bacteroidetes populations in the NW Mediterranean Sea

The abundance and structure of Bacteroidetes populations at diverse temporal and spatial scales were investigated in the Northwestern Mediterranean Sea. At a temporal scale, their relative abundance exhibited a marked seasonality, since it was higher in spring and decreased in winter. Similarly, Bacteroidetes community structure encompassed three main groups (winter, spring and summer-fall), which mimicked global bacterioplankton seasonality. At the spatial scale, relative abundances were similar in all surface samples along an inshore–offshore transect, but they decreased with depth. Analysis of the community structure identified four markedly different groups mostly related to different depths. Interestingly, seasonal changes in abundance and community structure were not synchronized. Furthermore, richness was higher when Bacteroidetes were less abundant. The variability of Bacteroidetes contributions to community structure in the temporal and spatial scales was correlated with different environmental factors: day length was the most important factor at the temporal scale, and salinity at the spatial scale. The community composition in terms of phylotypes changed significantly over time and along the depth gradients, but season or depth-specific phylogenetic clusters were not identified. Delineation of coherent Bacteroidetes sub-clusters should help to uncover higher resolution patterns within Bacteroidetes, and explore associations with environmental and biological variables.     

Seasonal dynamics of microcrustacean and rotifer communities in Malaysian rice fields used for rice-fish farming

The abundance, seasonal dynamics and species composition of microcrustacean and rotifer communities in rice fields used for rice-cum-fish culture were examined. The shallow littoral-like nature of rice fields resulted in the presence of cladoceran and rotifer species, but copepods were numerically more abundant. Abundance and seasonal dynamics were affected by factors such as pesticides and herbicide use, predator-prey relationships, presence of hydrophytes and interactions among microcrustaceans and rotifers. The implications of microcrustacean and rotifers abundance and seasonal dynamics on rice-fish farming are discussed.     

Spatial and temporal variability in a butterfly population

Summary The dynamics of a butterfly (Plebejus argus) population were analysed at two levels, (i) the population as a whole and (ii) sections within the population. Some sections of the population fluctuated out of synchrony with others, such that the variability [SD Log(Density+1)] shown by the population as a whole was less than the variability shown by each part of the population — overall temporal variability was dampened by spatial asynchrony. Since observed population variability depends on the spatial scale that is sampled, comparisons of population variability among taxa should be carried out only with caution. Implications for island biogeography and conservation biology are discussed.     

Effects of different management regimes on aquatic macroinvertebrate diversity in Australian rice fields

The maintenance of invertebrate diversity within agricultural environments can enhance a number of agronomically important processes, such as nutrient cycling and biological pest control. However, few Australian studies have been undertaken which specifically address the effects of commercial management regimes on rice field biodiversity. In this study, we compared aquatic macroinvertebrate communities within Australian rice fields cultivated under three commercial management regimes: conventional-aerial (agrochemicals applied, aerially sown), conventional-drill (agrochemicals applied, directly drill-sown) and organic-drill (agrochemical-free, directly drill-sown). These comparisons were undertaken using a combination of community assessment approaches, including morphospecies richness, abundance, diversity and community composition. In general, greater biodiversity existed within macroinvertebrate communities that developed under organic management regimes than under conventional regimes (i.e., higher morphospecies richness and Shannon diversity). Although there were significant differences in several parameters across management regimes early in the rice-growing season, as the growing season progressed the invertebrate communities that developed in the different management regimes became more similar. Only community composition analyses showed significant differences late in the growing season, with functional differences across aquatic faunal assemblages suggested by increased predator abundance in communities sampled from the organic management regime. In order to improve biodiversity within these aquatic environments, management techniques need to be examined individually and the most disruptive processes identified. Alternative management procedures can then be developed that minimise biodiversity loss whilst still delivering required agronomic outcomes.     

Benthic macroinvertebrate distributions in the riffle-pool communities of two east Texas streams

The benthic macroinvertebrate riffle-pool communities of two east Texas streams were sampled monthly for a period of one year. In contrast to previous studies in primarily upland areas, pools in Alazan Creek and Bernaldo Bayou contained significantly higher densities and biomass, as well as a significantly higher diversity and number of taxa. The majority of taxa collected could be characterized as pool adapted organisms, with the Diptera, Ephemeroptera, Coleoptera, and Odonata having greater numbers in pools. Perlesta, Baetis, and Cheumatopsyche were the only genera to have significant numbers in riffles at both sampling sites. A greater number of taxa were restricted to pools at both sampling locations, and although an unstable, sandy substrate was a factor in limiting colonization of riffles, riffles were not as productive as pools even in the presence of suitable substrate conditions. A cluster analysis based on similarity indices indicated that like habitats between streams were more similar to each other, than were adjacent riffle-pool complexes within streams.     

The influence of habitat structure and flow permanence on macroinvertebrate assemblages in temporary rivers in northwestern Zimbabwe

Temporary rivers within the Nyaodza-Gachegache subcatchment in northwestern Zimbabwe were investigated to examine the role of flow permanence and habitat structure on macroinvertebrate community composition. Macroinvertebrate communities of intermittent and ephemeral rivers displayed significant differences in the number of taxa, macroinvertebrate abundance, Shannon and Simpson diversity indices and in size class structure. Intermittent sites were characterised by higher numbers of taxa, diversity and Ephemeroptera and Trichoptera richness compared to ephemeral sites. The fauna of ephemeral sites was dominated by a single taxon (Afrobaetodes) (Ephemeroptera, Baetidae) whilst larger sized taxa (e.g. Elassoneuria (Ephemeroptera, Oligoneuriidae), Dicentroptilum (Ephemeroptera, Baetidae), Aethaloptera (Trichoptera, Hydropsychidae), Pseudagrion (Odonata, Coenagrionidae) and Tholymis (Odonata, Libellulidae) were exclusively restricted to intermittent sites. Clear differences were observed between sand, gravel, cobble and vegetation habitats. Vegetation and cobbles supported distinct communities, with some taxa exclusively restricted either to vegetation (e.g. Pseudagrion, Leptocerina (Trichoptera, Leptoceridae), Cloeon (Ephemeroptera, Baetidae), Afronurus (Ephemeroptera, Heptageniidae) and Povilla (Ephemeroptera, Polymitarcidae) or cobble (e.g. Aethaloptera and Dicentroptilum) habitats. In terms of ensuring optimum diversity within the subcatchment, we consider conservation of critical habitats (cobbles and vegetation) and maintenance of natural flows as the appropriate management actions. Handling editor: D. Dudgeon     

Spatial and temporal distribution of copepod communities in the Adriatic Sea

The distribution of planktonic copepods in the Adriatic Seahas been analyzed on the basis of 132 samples collected at 35fixed stations during 4 seasonal cruises. A total of 127 specieshave been determined and 3 characteristic copepod communitieshave been identified. The distribution of copepod species hasbeen found to reflect the dual physiognomy of the Adriatic.The shallow northern section is characterized by high densityvalues, low species diversity, and the dominance of speciesbelonging to the estuarine and coastal communities. The relativelydeep waters of the southern section are characterized by lowdensity values, high species diversity, and the presence ofmany species belonging to the upper, middle, and lower zonesof the oceanic community. Temporal variations in the horizontalspread of these 3 communities are discussed in relation to seasonalcycles in abundance, vertical migration patterns, and the currentregime in the Adriatic.     

Short-term invasibility patterns in burnt and unburnt experimental Mediterranean grassland communities of varying diversities

This paper reports the findings of a short-term natural invasibility field study in constructed Mediterranean herbaceous communities of varying diversities, under a fire treatment. Three components of invasibility, i.e. species richness, density and biomass of invaders, have been monitored in burnt and unburnt experimental plots with resident diversity ranging from monocultures to 18-species mixtures. In general, species richness, density and biomass of invaders decreased significantly with the increase of resident species richness. Furthermore, the density and biomass of invading species were significantly influenced by the species composition of resident communities. Although aboveground biomass, leaf area index, canopy height and percent bare ground of the resident communities explained a significant part of the variation in the success of invading species, these covariates did not fully explain the effects of resident species richness. Fire mainly influenced invasibility via soil nutrient levels. The effect of fire on observed invasibility patterns seems to be less important than the effects of resident species richness. Our results demonstrate the importance of species richness and composition in controlling the initial stages of plant invasions in Mediterranean grasslands but that there was a lack of interaction with the effects of fire disturbance.     

Spatial and temporal variability in the structure of a tropical forest

This study examines spatial and temporal variation in the forest structure of the Kibale National Park, Uganda by contrasting tree density, tree size, and forest composition among four areas each separated by less than 15 km, and by quantifying changes in the composition of one of these forests over a 20‐year period. Densities of some tree species differed markedly between sites, and some species common at one location were absent at others. Monthly phenological monitoring demonstrated that it was not uncommon for phenological patterns to differ between the forests. To examine temporal variation in the tree composition over a 20‐year period, a sampling regime that was carried out in the early 1970s was replicated on the floristic composition of one of these sites, using identical methods in the same sampling areas. While no form of human intervention occurred in this area between the early 1970s and 1992, there were marked changes in the densities of some tree species. Twenty‐seven percent of the identified species increased in abundance, 33% decreased, and 40% remained relatively unchanged. The observed spatial and temporal variation in forest composition could be the result of abiotic factors, such as altitude or rainfall, or biotic factors such as elephant and/or human influences on ecosystem dynamics; the implications of this variation for frugivores are discussed.     

Spatial and temporal variability of antibiotic resistance in freshwater bacterial assemblages

Abstract Spatial and temporal variability in antibiotic resistance was examined in bacterial assemblages from streams and ponds on the US Department of Energy's Savannah River Site (SRS) in South Carolina. Sites sampled have been impacted to varying degrees by contamination with organic compounds, heavy metals, and radioactive materials because of production of nuclear materials on the site. Antibiotic resistance in the culturable portion of the bacterial assemblage was determined from coloby formation on media containing antibiotics. Eight antibiotics, chloramphenicol, cycloserine, kanamycin, neomycin, novobiocin, rifampicin, streptomycin, and tetracycline, were used at concentrations of 50 and 200 μg ml⁻¹. Statistically significant differences in frequency of antibiotic resistance were observed among sites and among dates at a single site. Bacterial densities (total and culturable), dissolved organic carbon (DOC) concentration, and human impact also varied among sites but bore no overall relationship to resistance frequency. SRS operations did not have a detectable impact on antibiotic resistance.     

生物防治稻田与普通稻田水体中浮游植物的生态特征研究

通过对大沙镇生物防治稻田及普能稻田水体中浮游植物的调查研究,共检出藻类112种,其中生物防治稻田中82种,普通稻田中89种,稻田水体中的浮游植物以硅藻、裸藻和绿藻占优势,在普通稻田中,硅藻种类数超过生物防治稻田,其优势度最高的5种藻类中除双对栅藻外,其余4种均为硅藻;而在生物防治稻田中,裸藻种类数高于普通稻田,且其优势度最高的5种藻类中有两种为裸藻,通过比较发现,生物防治稻田不体中浮游生物的密度明显高于普通稻田,对水体浮游植物多样性及均匀度的分析表明,稻田水体中的浮游植物自秧苗插上至干田期间,多样性指数略有上升（上要是由于种类数的增加引起的）,而均匀度呈下降趋势。     

Spatial variability in macroinvertebrate assemblages along and among neighbouring equatorial glacier‐fed streams

1. During the past two decades, understanding of the structure and function of glacier‐fed stream ecosystems at temperate latitudes has increased substantially. In contrast, information on their tropical counterparts is very limited. We studied three neighbouring glacier‐fed streams in the tropical Andes of Ecuador. Our main goals were (i) to determine overall longitudinal patterns in density, taxon richness and the composition of macroinvertebrate assemblages and driving factors in equatorial glacial streams and (ii) to examine variability among replicate streams in faunal metrics and assemblages, and stream‐specific effects of supposed environmental key factors. 2. We measured four geographical and 17 environmental factors and collected five Surber samples (500 cm²) of macroinvertebrates at each of nine sites, three sites along three streams. The streams were located 1–5 km apart. In each stream, the three sites were placed at comparable distances from the glacier and were grouped as ‘upper’ (50–200 m), ‘middle’ (1.5 km) and ‘lower’ sites (3.5–5.6 km). 3. In total, 2200 individuals (64% chironomids) were collected and 47 taxa (30 dipterans, 18 of these Chironomidae) identified. Density ranged from 176 to 372 ind. m^?2, and the number of taxa ranged from 2 to 6 at the upper sites and 868–3044 ind. m^?2 and 21–27 taxa at the lower sites. Density, number of taxa, rarefied richness and axis‐1 coordinates from a MDS ordination increased logarithmically with distance from the glacier. These faunal metrics were equally related to altitude and glacier per cent of catchment and correlated with maximum conductivity, mean temperature, mean daily maximum temperature and a channel stability index. As expected, the mean difference in distance decay in similarity was higher at the upper (47% km^?1) than at the lower reaches (20% km^?1) of the streams. 4. The number of taxa varied among sites within the upper and middle groups, but not among the lower sites. In contrast, but in accordance with our expectation, assemblage composition did not differ among upper sites but did so at middle and lower sites, following a supposed decrease in environmental harshness along the streams. Relationships between faunal metrics and the four environmental variables mean temperature, the stability index, chlorophyll a and coarse particulate organic matter also varied among the three streams. Generalised linear model analyses revealed that temperature interacted with stream on macroinvertebrate density, while chlorophyll a had a significant effect on the number of taxa in interaction with stream and stability. 5. The basic predictions of the Milner et al. (2001a) , model regarding longitudinal faunal patterns and temperature and stability as main driving factors were met by our three replicate equatorial glacial streams. Qualitative departures from the model were mainly because of zoogeographical differences. We demonstrated that variability in assemblages between comparable sites in closely situated streams was considerable, and the effect of key environmental factors varied among streams and interacted with other factors. Quantifying spatial variation in benthic assemblages may help us foresee possible consequences for biodiversity as a result of glacial retreat.     

Spatial and temporal heterogeneity of the bacterial communities in stream epilithic biofilms

The spatial and temporal variability in bacterial communities within freshwater systems is poorly understood. The bacterial composition of stream epilithic biofilms across a range of different spatial and temporal scales both within and between streams and across the profile of individual stream rocks was characterised using a community DNA-fingerprinting technique (Automated Ribosomal Intergenic Spacer Analysis, ARISA). The differences in bacterial community structure between two different streams were found to be greater than the spatial variability within each stream site, and were larger than the weekly temporal variation measured over a 10-week study period. Greater variations in bacterial community profiles were detected on different faces of individual stream rocks than between whole rocks sampled within a 9-m stream section. Stream temperature was found to be the most important determinant of bacterial community variability using distance-based redundancy analysis (dbRDA) of ARISA data, which may have broad implications for riparian zone management and ecological change as a consequence of global warming. The combination of ARISA with multivariate statistical methods and ordination, such as multidimensional scaling (MDS), permutational manova and RDA, provided rapid and effective methods for quantifying and visualising variation in bacterial community structure, and to identify potential drivers of ecological change.     

Spatial and temporal variability in a stratified hypersaline microbial mat community

Hypersaline microbial mat communities have recently been shown to be more diverse than once thought. The variability in community composition of hypersaline mats, both in terms of spatial and temporal dimensions, is still poorly understood. Because this information is essential to understanding the complex biotic and abiotic interactions within these communities, terminal restriction fragment analysis and 16S rRNA gene sequencing were used to characterize the near-surface community of a hypersaline microbial mat in Guerrero Negro, Mexico. Core samples were analyzed to assay community variability over large regional scales (centimeter to kilometer) and to track depth-related changes in population distribution at 250-μm intervals over a diel period. Significant changes in total species diversity were observed at increasing distances across the mat surface; however, key species (e.g. Microcoleus sp.) were identified throughout the mat. The vertical position and abundance of >50% of the 60 peaks detected varied dramatically over a diel cycle, including Beggiatoa sp., cyanobacteria, Chloroflexus sp., Halochromatium sp., Bacteroidetes sp. and several as-yet-identified bacteria. Many of these migrations correlated strongly with diel changes in redox conditions within the mat, contributing to strong day–night community structure differences.     

Spatial and temporal variability in export fluxes of biogenic matter in Kongsfjorden

The marine ecosystem of Kongsfjorden experiences large variations in primary productivity due to pronounced seasonal variations in sunlight, glacier melt, and ice cover. The objective of this study was to assess spatial and seasonal variability in the downward export of biogenic matter in Kongsfjorden. Short-term sediment traps were deployed for periods ranging from 21 to 52 h at three stations from the inner fjord to the outer fjord in May, August, and October 2012 and at one mid-fjord station in January 2013. Total particulate matter, particulate organic carbon, phytoplankton cells, chlorophyll a, biogenic particulate silica, and zooplankton fecal pellet fluxes were measured to determine the magnitude and composition of the material exported in the fjord. The amount and composition of export fluxes reflected a large phytoplankton bloom grazed upon by zooplankton in May, the melting of glaciers and the intrusion of Atlantic Water in August, the end of the glacier melt period in October, and the polar night in January. Overall, seasonal changes in the phytoplankton community impacted export efficiency in the fjord, directly through phytoplankton sinking and indirectly through zooplankton grazing. Results obtained in this study may reflect the magnitude and composition of export fluxes to expect in coming years in Kongsfjorden, especially under conditions of warmer Atlantic Water and longer glacier melt periods.     

Spatial and temporal variability across life's hierarchies in the terrestrial Antarctic

Antarctica and its surrounding islands lie at one extreme of global variation in diversity. Typically, these regions are characterized as being species poor and having simple food webs. Here, we show that terrestrial systems in the region are nonetheless characterized by substantial spatial and temporal variations at virtually all of the levels of the genealogical and ecological hierarchies which have been thoroughly investigated. Spatial variation at the individual and population levels has been documented in a variety of genetic studies, and in mosses it appears that UV-B radiation might be responsible for within-clump mutagenesis. At the species level, modern molecular methods have revealed considerable endemism of the Antarctic biota, questioning ideas that small organisms are likely to be ubiquitous and the taxa to which they belong species poor. At the biogeographic level, much of the relatively small ice-free area of Antarctica remains unsurveyed making analyses difficult. Nonetheless, it is clear that a major biogeographic discontinuity separates the Antarctic Peninsula and continental Antarctica, here named the 'Gressitt Line'. Across the Southern Ocean islands, patterns are clearer, and energy availability is an important correlate of indigenous and exotic species richness, while human visitor numbers explain much of the variation in the latter too. Temporal variation at the individual level has much to do with phenotypic plasticity, and considerable life-history and physiological plasticity seems to be a characteristic of Antarctic terrestrial species. Environmental unpredictability is an important driver of this trait and has significantly influenced life histories across the region and probably throughout much of the temperate Southern Hemisphere. Rapid climate change-related alterations in the range and abundance of several Antarctic and sub-Antarctic populations have taken place over the past several decades. In many sub-Antarctic locations, these have been exacerbated by direct and indirect effects of invasive alien species. Interactions between climate change and invasion seem set to become one of the most significant conservation problems in the Antarctic. We conclude that despite the substantial body of work on the terrestrial biodiversity of the Antarctic, investigations of interactions between hierarchical levels remain scarce. Moreover, little of the available information is being integrated into terrestrial conservation planning, which lags far behind in this region by comparison with most others.