Cryptic species in a Neotropical parrot: genetic variation within the Amazona farinosa species complex and its conservation implications

The application of genetic approaches has enhanced the identification of cryptic species in a wide variety of taxa, often with immediate conservation implications. Here, we employed multilocus DNA analyses to assess genetic variation and its correspondence to taxonomy within the Mealy Amazon (Amazona farinosa), a parrot species found in Central and South America. DNA sequence data from four mitochondrial regions and two nuclear introns were used to infer relationships among all five named subspecies in this species complex. Two reciprocally monophyletic groups with strong nodal support were found; one comprised of the two Central American subspecies guatemalae and virenticeps and one including all three South American subspecies farinosa, chapmani, and inornata. Molecular characters diagnosed distinct Central American and South American lineages, with an estimated divergence time of 1.75–2.70 million years ago as inferred from cytochrome-b (3.5–5.4 % corrected distance). Our data support recognizing Central American and South American Mealy Amazons as separate species worthy of independent conservation management. Furthermore, our results suggest recognition of two separate management units within the South American clade, although further study is required. These findings have important conservation implications as Central American A. farinosa are under increased pressure from habitat destruction and collection for the pet trade, yet are listed as of Least Concern due to their current classification as subspecies’ subsumed within the species complex.     

Phylogenetic relationships among species of Hypochaeris (Asteraceae, Cichorieae) based on ITS, plastid trnL intron, trnL-F spacer, and matK sequences

Nuclear internal transcribed spacer (ITS) regions and chloroplast trnL intron and trnL/trnF spacer and matK sequences were used from 86 accessions to assess relationships among 31 European and South American species of Hypochaeris plus 18 representatives of related genera of tribe Cichorieae. The ITS tree shows high resolution compared to that of the maternally inherited trnL intron, trnL/F spacer, and matK sequences. The ITS and the combined tree reveal clades that agree well with sections of the genus established previously on morphological and cytological grounds, except for H. robertia, which groups with Leontodon helveticus and L. autumnalis. Monophyly of species of Hypochaeris from South America is strongly supported by both ITS and the joint matrix of ITS, trnL, and matK data. European species lie basal to South American taxa, which suggests that species in South America evolved from a single introduction from European progenitors and not from H. robertia as suggested previously. Low levels of sequence divergence among South American taxa suggest a pattern of rapid speciation, in contrast to much greater divergence among European representatives. Different species of Leontodon form two different clades that are also supported by chromosome numbers and morphology. Both nuclear and chloroplast markers suggest that Helminthotheca, Leontodon, and Picris are closely related to each other as well as to Hypochaeris.     

Karyotype evolution in South American species of Hypochaeris (Asteraceae, Lactuceae)

The genus Hypochaeris (Asteraceae, Lactuceae) contains ten species in Europe, three in Asia, and approximately 50 in South America. Previous cytotaxonomic studies have shown two groups of taxa: (1) European species with different basic chromosome numbers and differentiated karyotypes, and (2) South American species with x=4 and uniform asymmetric and bimodal karyotypes. Karyotypic data are synthesized for South American species of Hypochaeris with new information for six Chilean species: H. acaulis, H. apargioides, H. palustris, H. spathulata, H. tenuifolia and H. thrincioides. Four main groups can be distinguished based on presence and localization of secondary constrictions – SCs (bearing Nucleolar Organizer Regions – NORs) on chromosomes 2 and 3, and 18S–25S and 5S rDNA loci number, localization, and activity. We propose karyotypic evolution of South American Hypochaeris (x=4) from H. maculata-like (x=5) European ancestors. The original South American karyotype would have possessed two SCs, one on the long arm of chromosome 2, and the other on the short arm of chromosome 3 (in terminal position). Further evolution would have involved inversion within the short arm of chromosome 3 and inactivation/loss of the SC on chromosome 2.     

First chromosome number determinations in south-eastern South American species of Lupinus L. (Leguminosae)

Chromosome numbers are presented for the first time for 30 accessions of nine south-eastern South American Lupinus species. Chromosome numbers of 2 n = 32 and 34 were found for L. bracteolaris (three out of five accessions with 2 n = 32) and L. linearis (two out of three accessions with 2 n = 32), and of 2 n = 36 for L. gibertianus , L. lanatus, L. magnistipulatus , L. multiflorus , L. rubriflorus , L. reitzii and L. uleanus . All the South American species examined have relatively low chromosome numbers when compared with most of the Old World and North American species. Our results, where 2 n = 36 is the rule, are in sharp contrast to the data for North American Lupinus species and reveal the following: (1) low chromosome numbers are the rule, at least in the southern part of eastern South America; (2) cytologically, the eastern South American species form a group distinct from the North American taxa; (3) high levels of polyploidy have not played as important a role in evolution and speciation in eastern South America as in North America; (4) the predominance of low chromosome numbers in eastern South American species and the existence of similar numbers in two of the six rough-seeded Old World species support the hypothesis that in the evolution of the genus the eastern South American species branched off first, followed by the rough-seeded group.  © 2002 The Linnean Society of London, Botanical Journal of the Linnean Socety , 2002, 139 , 395–400.     

New Elaphomyces species (Elaphomycetaceae, Eurotiales, Ascomycota) from Guyana

Elaphomyces compleximurus sp. nov. and E. digitatus sp. nov. are described from the Pakaraima Mountains of Guyana. Macromorphological, micromorphological, habitat and DNA sequence data are provided for each new species. This is the first report of Elaphomyces ascomata associated with ectomycorrhizal members of the Fabaceae and also for the genus from the lowland South American tropics.     

A new species of Myotis Kaup, 1829 (Chiroptera, Vespertilionidae) from Ecuador

A new species of bat in the genus Myotis (Vespertilionidae, Myotinae) is described from the Chocó ecoregion on the western slope of the Andes in northwestern Ecuador. The genus Myotis comprises a diverse group of small to large-sized vespertilionid bats distributed worldwide. Twelve South American species are recognized currently, 6 of which occur in Ecuador. Morphological relationships among the new species and the other 12 South American species of Myotis were examined using 15 cranial and 5 external characters. Both qualitative and quantitative analyses found the new species to be distinct. As an aid to future identifications, we provide a key to the Ecuadorian species of Myotis.     

Grindelia mendocina (Asteraceae, astereae), a new South American species

Taxonomic revision of South American species of Grindelia Willd. has revealed a new species from Argentina, with homogamous capitula and cushion-shaped habit. The taxon is here described and illustrated.     

Morphometric analyses and new taxonomic circumscription of South American species of Flourensia (Asteraceae,Heliantheae, Enceliinae)

Flourensia (Asteraceae, Heliantheae, Enceliinae) is an amphitropical genus of resinous subshrubs, shrubs and small trees with 13 North American and 20 South American species among which disagreement on the species limits of some members still exists. To resolve the taxonomy of the South American taxa, we carried out a combination of clustering (Ward's method with Gower distance coefficient) and ordination analyses (Principal Coordinate Analyses) based on 34 vegetative and reproductive characters scored from herbarium material, including types. Based on the results, we recognize 12 South American species: F. angustifolia, F. cajabambensis, F. fiebrigii, F. heterolepis, F. hirtissima, F. macrophylla, F. niederleinii; F. peruviana, F. polycephala, F. thurifera, F. tortuosa and F. suffrutescens. A number of species are placed in synonymy: Flourensia blakeana and F. hirta are synonymized under the name F. fiebrigii; Flourensia campestris, F. leptopoda, F. oolepis and F. riparia are synonymized under F. thurifera; Flourensia macroligulata is synonymized under F. tortuosa, and Flourensia polyclada is synonymized under F. suffrutescens. A taxonomic treatment of four redefined species as well as a key and distribution maps to all South American Flourensia species are provided.     

The drug aloes of commerce,with special reference to the cape species

The laxative property in the juice of aloe leaves has been recognized since ancient times. The Union of South Africa is the principal producer today, but 90% of American imports come from the Dutch West Indies— Aruba and Bonaire.     

The Genus Uroleucon Mordvilko (Insecta, Aphidoidea) in South America, with a key and descriptions of four new species

Uroleucon is one of only two genera of Aphidinae to have undergone significant speciation in South America, with a group of about 14 endemic, morphologically similar species feeding on native Compositae, especially Baccharis . Multivariate morphometrics (canonical variates analysis, CVA) was used to discriminate between these species and compare them with the North American subgenus Lambersius , in which most of them have hitherto been placed. It is concluded that they probably form a separate monophyletic group. Four new species are described in this group— brevisiphon, essigi, petrohuense and pseudomuennosum— and five names are placed in synonymy. Of the other species of Uroleucon in South America, U. lizerianum is widespread and feeds on many species of native and introduced Compositae; it is morphometrically inseparable from the North American species U. ambrosiae and is probably an introduced form of that species, but has consistently fewer secondary rhinaria. A key is provided to the 19 available species of Uroleucon recorded from South America.     

Zornia confusa,a new species of Zornia section Anisophylla (Leguminosae)

Zornia confusa is described and illustrated. This species is found from Mexico to central Brazil. A key to the South American species of Zornia with fruits longer than their protecting bracts is provided.     

Geographic variation in South American populations of Myotis nigricans () (Chiroptera, Vespertilionidae), with the description of two new species

The genus Myotis (Vespertilionidae, Myotinae) comprises a diverse group of small to large-sized vespertilionid bats that present a worldwide distribution. Twelve South American species are currently recognized. In this paper we evaluate the morphological and morphometric variation observed in South American populations of the most widespread species, Myotis nigricans. Against this background, two forms can be morphologically distinguished from M. nigricans and other known South American species. We describe these new species, documenting their diagnostic external and cranial characters by comparing them to other sympatric and cryptic species of South American Myotis. In addition, we provide an emended diagnosis of Myotis nigricans.     

Xanthones,flavones and secoiridoids of american Gentiana species

Isoorientin, isoorientin-4′-O-glucoside, gentiopicrin, xanthones with 1,3,5,8 or 1,3,7,8-oxidation pattern have been isolated from five North American Gentiana species (G. affinis, G. algida, G. calycosa, G. detonsa, G. strictiflora) and one South American species (G. cerastioides). Separations were achieved with droplet counter-current chromatography (DCCC) or centrifugally accelerated preparative TLC. The distribution of the isolated compounds within the genus is discussed.     

The South American Gomphotheres (Mammalia, Proboscidea, Gomphotheriidae): Taxonomy, Phylogeny, and Biogeography

The taxonomic history of South American Gomphotheriidae is very complex and controversial. Three species are currently recognized: Amahuacatherium peruvium, Cuvieronius hyodon, and Notiomastodon platensis. The former is a late Miocene gomphothere whose validity has been questioned by several authors. The other two, C. hyodon and N. platensis, are Quaternary taxa in South America, and they have distinct biogeographic patterns: Andean and lowland distributions, respectively. South American gomphotheres became extinct at the end of the Pleistocene. We conducted a phylogenetic analysis of Proboscidea including the South American Quaternary gomphotheres, which resulted in two most parsimonious trees. Our results support a paraphyletic Gomphotheriidae and a monophyletic South American gomphothere lineage: C. hyodon and N. platensis. The late Miocene gomphothere record in Peru, Amahuacatherium peruvium, seems to be a crucial part of the biogeography and evolution of the South American gomphotheres.     

New species of Trichuris (Nematoda:Trichuridae) from Akodon montensis, Thomas, 1913, of the Paranaense Forest in Argentina

Species of Trichuris (Nematoda:Trichuridae) parasitize a broad range of mammalian hosts. To date, 21 Trichuris species infecting nine families of rodents have been found in North and South America. Trichuris navonae n. sp. is described on the basis of specimens recovered from a species of forest-dwelling mice, Akodon montensis (Cricetidae: Sigmodontinae), from nine localities of Misiones Province, Argentina. A comparison with all the species of Trichuris from North and South American rodents is given. The separation of the new species of Trichuris is based on morphologic and morphometrica features, such as the absence of a spicular tube, the presence of a cylindrical spicular sheath with sharp spines, a non-protrusive vulva, a long anterior-posterior portion of the body, a lengthy spicule, and a proximal and distal cloacal tube. This is the third record of this genus in rodents of the Sigmodontinae from Argentina and the fifth record from South American rodents. Despite the large number of potential host species, only about 1.9% of sigmodontine rodent species have been reported as hosts of Trichuris spp. It is suggested that this number represents but a small fraction of Trichuris spp. that occur in sigmodontine rodents, and that additional survey of this group should yield additional species.     

Genetic relationships among South American species of Cunila D. Royen ex L. based on ISSR

Cunila species are among the commonly used South Brazilian plants in popular medicine. This genus presents two centers of distribution in North and South America; the latter being classified into three sections: Incanae, Incisae and Spicatae. Based on the prospective utility as aromatic and medicinal plants, the aim of this work was to examine the genetic diversity among the South American species to contribute to the knowledge of their botanical sections. In this context, 11 Cunila species were analyzed by ISSR using seven primers that generated a total of 107 bands. The relationship was evaluated by constructing dendrograms using the UPGMA algorithm and analysis of principal components. The cluster analysis places the species C. origanoides with the South American species, but forming an independent cluster. Remarkably, among South American species two clusters emerge, one consisting of shrubs and the second by subshrubs species, which refines the botanical taxonomy for several species of the genus.     

Multiple cryptic species with divergent substrate affinities in the Serpula himantioides species complex

Serpula himantioides is a widespread saprotrophic morphospecies mainly colonising coniferous wood in nature, but it appears frequently in buildings as well. From an earlier study, it is known that at least three divergent lineages occur within the S. himantioides species complex. In this study, a broader sample of S. himantioides isolates has been analysed by multi-locus sequencing, including new isolates from Asia, North and South America. Altogether five phylogenetical species (PS1-5) were detected, all recognised across independent gene phylogenies. A new southern South American phylogenetic species (PS1) was found, representing an early diverging lineage within the S. himantioides species complex. The two closely related PS2 and PS3 lineages included isolates from North America only, and PS4 was also dominated by North American isolates. Most of the investigated isolates (76%) clustered into PS5, a lineage that has been found on most continents, including North America. Overall, little phylogeographical structure was found in PS5, indicating frequent and recent long-distance dispersal events within this widespread lineage. Our analyses indicate that South and North America are the centres of divergence for the S.?himantioides species complex. Some of the lineages seem adapted to various substrates, but PS5 is able to decay a wide array of angiosperms and gymnosperms, which may have facilitated the spread of this lineage throughout the world.     

Notes on Bursera in South America,including a new species. Studies in Neotropical Burseraceae VII

Bursera inversa is the first new species of the genus to be described from South America in 90 years. The ecology of this species is remarkable because it is a large (to 25 m × 40 cm or greater) canopy tree of primary moist to wet lowland forest. It is easily distinguished from its congeners by its large, obovoid fruits and bony pyrene. A key to the South American species ofBursera is provided.     

Colour forms of Amazonian cichlid fish represent reproductively isolated species

Laboratory mate choice experiments have confirmed species status for cichlid fish in the African Great Lakes that differ in colour and little else. Colour differences between allopatric populations of the South American cichlid genus Apistogramma are known for many species, yet the status of such populations has not been previously tested. Analysis of the genetic relationships and mate choice characteristics of populations previously described as Apistogramma caetei from eastern Amazonia indicates genetic differentiation into at least three allopatric lineages, which also show strong prezygotic isolation through female mate choice, confirming them as Biological species. If future studies confirm that this result is indicative of a general trend, the species richness of the South American cichlid fishes may presently be seriously underestimated.