An updated assessment of the seabird populations breeding at Príncipe and Tinhosas

The Príncipe Autonomous Region is recognised as a marine biodiversity hotspot, although little is known about the status of its marine fauna. It holds most breeding seabirds of the tropical eastern Atlantic Ocean. Based on anecdotal accounts of increased fishing and seabird harvesting, regular monitoring of seabird populations is considered a priority. Therefore, a survey of Príncipe’s seabird colonies was conducted in 2017. The results revealed that the more accessible seabird colonies have disappeared. Around Príncipe, Boné de Joquei is the present main stronghold for Brown Boobies Sula leucogaster and White-tailed Tropicbirds Phaethon lepturus. The Tinhosas islands hold an estimated 300 000 seabirds, predominantly Sooty Terns Onychoprion fuscatus, but also Brown Boobies, Black Noddies Anous minutus and Brown Noddies Anous stolidus. Long-term multi-annual monitoring is needed to understand the breeding phenology of each species and to better assess population trends. Ensuring a protective status for both Tinhosas and the seabirds under national legislation is a key priority for future conservation policy in São Tomé and Príncipe.     

Genetic structure of Anopheles gambiae (Diptera: Culicidae) in São Tomé and Príncipe (West Africa): implications for malaria control

The impact of a vector eradication programme, conducted in the 1980s, on Anopheles gambiae populations from the islands of São Tomé and Príncipe, was evaluated by microsatellite DNA analysis. Significant genetic differentiation was observed within and between the two islands and between the islands and a population from Gabon, suggesting a degree of isolation between them. Large estimates of long‐term N_e suggested that the control programme did not affect the effective population size of the vector. Heterozygosity tests were also not consistent with a recent bottleneck.     

The endangered São Tomé Grosbeak Neospiza concolor is the world's largest canary

The São Tomé Grosbeak Neospiza concolor, endemic to the island of São Tomé (Gulf of Guinea), is one of the least known birds in the world. Formerly considered to be an aberrant weaver (Ploceidae), it is currently placed in a monotypic genus within the true finches (Fringillidae). Phylogenetic inference based on mitochondrial and nuclear sequences confidently identifies N. concolor as an Old World finch (Fringillidae: Carduelinae) within the Crithagra seedeater/canary clade. The São Tomé Grosbeak is therefore the world's largest canary, 50% heavier than the next largest species, and it co‐occurs with a population of its sister species, the Príncipe Seedeater Crithagra rufobrunnea.     

Reed frog diversification in the Gulf of Guinea: Overseas dispersal,the progression rule,and in situ speciation

Oceanic islands accumulate endemic species when new colonists diverge from source populations or by in situ diversification of resident island endemics. The relative importance of dispersal versus in situ speciation in generating diversity on islands varies with a number of archipelago characteristics including island size, age, and remoteness. Here, we characterize interisland dispersal and in situ speciation in frogs endemic to the Gulf of Guinea islands. Using mitochondrial sequence and genome‐wide single‐nucleotide polymorphism data, we demonstrate that dispersal proceeded from the younger island (São Tomé) to the older island (Príncipe) indicating that for organisms that disperse overseas on rafts, dispersal between islands may be determined by ocean currents and not island age. We find that dispersal between the islands is not ongoing, resulting in genotypically distinct but phenotypically similar lineages on the two islands. Finally, we demonstrate that in situ diversification on São Tomé Island likely proceeded in allopatry due to the geographic separation of breeding sites, resulting in phenotypically distinct species. We find evidence of hybridization between the species where their ranges are sympatric and the hybrid zone coincides with a transition from agricultural land to primary forest, indicating that anthropogenic development may have facilitated secondary contact between previously allopatric species.     

Freshwater paths across the ocean: molecular phylogeny of the frog Ptychadena newtoni gives insights into amphibian colonization of oceanic islands

Aim Amphibians are a model group for studies of the biogeographical origins of salt‐intolerant taxa on oceanic islands. We used the Gulf of Guinea islands to explore the biogeographical origins of island endemism of one species of frog, and used this to gain insights into potential colonization mechanisms. Location São Tomé and Príncipe, two of the four major islands in the Gulf of Guinea, West Africa, are truly oceanic and have an exceptionally high biodiversity. Methods Mitochondrial DNA is used to test the endemic status of a frog from São Tomé and compare it with congeneric taxa from tropical Africa. Existing data on surface currents, surface salinity, atmospheric circulation and bird migration in the Gulf of Guinea are summarized to address hypotheses concerning colonization mechanisms. Results The endemic status of Ptychadena newtoni (Bocage) is supported here by mitochondrial DNA sequences, and analysis of this and other molecular data indicates that an East African species close to Ptychadena mascareniensis (Duméril and Bibron) is its nearest relative. We refute the possibility that this population was anthropogenically introduced, in favour of a natural dispersal mechanism. Main conclusions With six endemic frogs and one caecilian, the Gulf of Guinea islands harbour a diverse amphibian fauna. Five of these species appear to have their closest relatives in East Africa. Insufficient evidence exists for transportation by storms, birds or rafts alone. However, we propose a synergy of rafting, favourable surface currents and a reduction in salinity of surface waters. Catastrophic events, or wet periods in climatic history, could allow freshwater paths to open far enough to enable continental flora and fauna to reach these and other isolated oceanic islands.     

Synopsis of <Emphasis Type="Italic">Acalypha</Emphasis> (Euphorbiaceae) of West Tropical Africa,including Cameroon,Chad, Equatorial Guinea,Gabon, and São Tomé and Príncipe

This work features a critical review of the Acalypha species of the West Tropical Africa, including Cameroon, Chad, Equatorial Guinea, Gabon, and São Tomé and Príncipe. As a result, 15 native species, and four that appear to be naturalized, are accepted, and 17 names are considered as synonyms. Comprehensive nomenclatural information is supplied, and nine lectotypes and one neotype are designated. An identification key is also provided, as well as two original illustrations.     

Flight-initiation response reflects short- and long-term human visits to remote islets

The increasing use of, and visits to, isolated territories by people (especially tourists) enables the investigation of how biodiversity reacts to evolutionarily novel pressures. We explored the behavioural reaction of a breeding seabird species, the Brown Noddy Anous stolidus, to our repeated visits at two study sites in the Chesterfield Islands, a newly classified reserve in the Coral Sea Natural Park. Repeated measures of flight-initiation distances (FIDs) at three sites and over time suggest that human visitations induced both a spatial phenotypical sorting or learning of individuals and a temporal habituation. In light of the novel ‘Sit and Defend’ mode of avian nest defence, the study finally provides the first dataset of FIDs for this species, and highlights management opportunities that could arise from the replication of such an approach to other breeding seabirds and therefore the conservation of remote island ecosystems.     

Field collections reveal that São Tomé is the Afrotropical island with the highest diversity of drosophilid flies (Diptera: Drosophilidae)

Summary

The Drosophilid fauna has been less investigated in the Atlantic Afrotropical islands than in the Indian Ocean. Located about 250 km from the continent, the volcanic island of São Tomé has been colonized mostly by natural means, probably by the wind, since the emergence of the island about 15 million years ago, and presumably also by anthropogenic transportation of invasive and domestic species. To date, 37 different Drosophilid species have been mentioned from São Tomé. The present work extends this list to 80 species. The genera Zygothrica, Phorticella and Hypselothyrea are newly recorded from the island. Among these 80 species, only 12 are putatively introduced by human activities, suggesting the preponderance of natural arrivals. Compared to other islands, São Tomé harbours a high diversity of drosophilids. At least 14 species are supposed to be endemic. Future molecular comparisons between the island flies and their continental relatives will probably help to identify other endemic species. The high diversity observed in São Tomé is certainly due to the large size of the island, and to the presence of vast natural altitudinal forests offering a variety of possible habitats. Further collections are likely to lead to an increase of the species list. From now, São Tomé island appears as an excellent laboratory for studying the ecology and evolution of the Drosophila model.     

Molecular phylogeny and systematics of Blue and Grey Noddies (Procelsterna)

We used a mitochondrial and nuclear DNA phylogeny to evaluate the relationships among all noddies (Anous and Procelsterna, Laridae) and to clarify their classification. The Lesser Noddy Anous tenuirostris and Black Noddy Anous minutus form a pair of closely related sister‐species, as do the Blue Noddy Procelsterna albivitta and Grey Noddy Procelsterna cerulea. Blue and Grey Noddies are embedded within the dark noddies and are the sister‐clade to the Lesser and Black Noddies, indicating that the genus Anous in its current definition is not monophyletic. Thus, we propose to merge all noddies into the genus Anous Stephens 1826 , and to consider Procelsterna Lafresnaye 1842 as a junior synonym.     

Insularity effects on bird immune parameters: A comparison between island and mainland populations in West Africa

Oceanic islands share several environmental characteristics that have been shown to drive convergent evolutionary changes in island organisms. One change that is often assumed but has seldom been examined is the evolution of weaker immune systems in island species. The reduction in species richness on islands is expected to lead to a reduced parasite pressure and, given that immune function is costly, island animals should show a reduced immune response. However, alternative hypotheses exist; for example, the slower pace of life on islands could favor the reorganization of the immune system components (innate vs. acquired immunity) on islands. Thus far, few island species have been studied and no general patterns have emerged. Here, we compared two immune parameters of birds from São Tomé and Príncipe islands to those of their close relatives at similar latitudes on the mainland (Gabon, West Africa). On islands, the acquired humoral component (total immunoglobulins) was lower for most species, whereas no clear pattern was detected for the innate component (haptoglobin levels). These different responses did not seem to arise from a reorganization of the two immune components, as both total immunoglobulins and haptoglobin levels were positively associated. This work adds to the few empirical studies conducted so far which suggest that changes in immune parameters in response to insularity are not as straightforward as initially thought.     

Pseudomonads from wild free-living sea turtles in Príncipe Island,Gulf of Guinea

Dissemination of antibiotic resistance is a major concern, especially in aquatic environments, where pollution contributes for resistant bacteria selection. These strains may have serious health implications, especially for endangered species, including the sea turtles’ hawksbill Eretmochelys imbricata and green turtles Chelonia mydas.We aimed to evaluate the presence of antibiotic resistant pseudomonads in wild sea turtles from Príncipe Island, São Tomé and Príncipe, Guinea Gulf. Isolates were obtained from oral and cloacal swabs of free-living turtles by conventional techniques. Pseudomonads screening was performed by multiplex-PCR (oprI/oprL) and biochemical identification and antibiotic resistance profiling were achieved using Vitek2. All pseudomonad isolates were genotyped by Rep-PCR.Thirteen isolates were oprI-positive and classified as pseudomonads, eight from the genus Pseudomonas with the species P. aeruginosa, P. stutzeri, and P. mendocina, and five co-isolated Alcaligenes faecalis. The P. aeruginosa isolate was also oprL-positive. Regarding isolates susceptibility profile, 38.5% were susceptible to all antibiotics tested, and multidrug resistant (MDR) strains were not identified. DNA fingerprinting did not show any specific clonal-cluster similarity.Data on the worldwide incidence of antibiotic resistance among wildlife is still very scarce, especially concerning remote tropical areas. Since Pseudomonas genus has emerged as a group of increasingly reported opportunistic microorganisms in human and veterinary medicine with high resistance levels, it could be used as a tool for environmental resistance surveillance, particularly considering their ubiquity.     

New species in the fern genus Dryopteris (Dryopteridaceae) from the islands in the Gulf of Guinea (West Africa)

Three new species of Dryopteris, D. cicatricata J.P. Roux and D. caperata J.P. Roux from São Tomé and D. aurantiaca J.P. Roux from Annobón are described. All three taxa appear to be local endemics. A key to the Dryopteris species occurring on the islands in the Gulf of Guinea is provided.     

Distribution of AMY2 polymorphism in S. Tomé and Príncipe (West Africa)

The genetic polymorphism of AMY2 was studied in the population of S. Tomé and Príncipe (West Africa) using agarose gel electrophoresis. AMY2 frequencies are reported for the first time in a subSaharian population. The gene frequencies found were: AMY2*1=0.948, AMY2*3=0.052 (N=173).     

Cats and seabirds: effects of feral Domestic Cat Felis silvestris catus eradication on the population of Sooty Terns Onychoprion fuscata on Ascension Island, South Atlantic

The population of Sooty Terns Onychoprion fuscata breeding on Ascension Island in the Atlantic Ocean was monitored over 17 years (1990–2007). This period spanned the programme of feral Domestic Cat Felis silvestris catus eradication from the island, which commenced in 2001 with the last Cat recorded in 2004. We report on the abundance of Sooty Terns and Black Rats Rattus rattus before and after Cat eradication. The Sooty Tern breeding population in the 1990s averaged 368 000 and Cats were killing Terns at an average rate of 33 adults per night. Following Cat eradication, adult Terns are no longer predated. However, egg predation by both Rats and Common Mynas Acridotheres tristis has continued with Mynas destroying more eggs than Rats. Unexpectedly, we observed a change in Rat predatory behaviour. Following Cat eradication, Rats have become a major predator of Sooty Tern chicks. Despite this change, the Tern population has shown a season-on-season increase since Cat eradication, 48.8% in 2005, 8.2% in 2006 and 6.1% in 2007, and the breeding population increased to 420 000 birds in 2007. Incubation success improved from 66.0 to 84.4% during Cat eradication, before dropping down again to 67.9% after Cats were eradicated and Rat control measures were introduced. Index traplines were set for Rats and Rat numbers fluctuated widely immediately after Cats were eradicated but there were no significant differences that could be attributed to changes in Cat numbers. Ascension Island Sooty Terns breed every 9.6 months and juveniles defer breeding for seven seasons. Hence 2008 is the first year in which an increase in the breeding Sooty Tern population directly attributable to Cat eradication is likely to be detected. We conclude that long-term monitoring is essential to guide conservation practice even in this relatively simple predator–prey system.     

Population genetics of four PKLR intragenic polymorphisms in Portugal and S?o Tomé e Príncipe (Gulf of Guinea).

Four intragenic PKLR polymorphisms [1705A/C, 1738C/T. T10/19, and (ATT)n microsatellite] were studied in normal population samples of Central Portugal and S?o Tomé e Príncipe, a small archipelago located in the Gulf of Guinea, West Africa. For all loci, the observed genotype distributions do not deviate from Hardy-Weinberg equilibrium. The allele frequencies found in the Portuguese population are similar to those previously described in Caucasian populations. Mother-child pair analysis for the (ATT)n microsatellite does not show deviations to the Mendelian rules. In S?o Tomé e Príncipe the biallelic polymorphisms 1705A/C, 1738C/T, and T10/19 presented inverse allelic frequencies when compared with the Portuguese population. Two new alleles were found at the (ATT)n microsatellite. Significant statistical differences were found between both populations. The results showed that S?o Tomeans had higher haplotype diversity and lower linkage disequilibrium among the polymorphic sites. The PKLR intragenic polymorphisms, commonly used in haplotype analysis with the gene mutations in PK-deficient patients, can thus be successfully employed in anthropological genetics.     

A review of the human activities impacting cetaceans in the eastern tropical Atlantic

• 1. The eastern tropical Atlantic (ETA), extending from Mauritania south to Angola, is inhabited by at least 34 cetacean species. Knowledge of cetaceans and the human activities affecting them in the ETA is scant.
• 2. Available literature was reviewed over three eras of ETA cetacean research: the whaling era (1700s–1950s); the stranding and specimen era (1950s–70s); and the modern field research era (1980s–present). Eight human activities were documented to impact ETA cetacean species: directed takes (whaling and small cetaceans); by‐catch or entanglement in fishing gear; the ETA tuna purse seine fishery; overfishing; habitat loss and degradation; vessel strikes; marine ecotourism; and live captures for display. Climate change may represent a future threat.
• 3. Directed takes of small cetaceans were documented in 12 ETA countries, and incidental by‐catch (especially in gillnets) in at least nine countries. Additionally, unknown levels of cetacean mortality occur in ETA tuna purse seine fisheries. The use of cetaceans as ‘bushmeat’ was documented in 15 countries and involved at least 23 species. Little information could be found on cetacean mortality in Liberia, Benin, Cameroon, Equatorial Guinea, São Tomé and Príncipe or the Democratic Republic of the Congo.
• 4. Human activities were most frequently and widely reported to impact on common bottlenose dolphins Tursiops truncatus and Atlantic humpback dolphins Sousa teuszii, which are particularly vulnerable to anthropogenic interactions due to their nearshore occurrence.
• 5. The lack of information on the scale of impacts and on cetacean abundance and population structure in the ETA currently hinders assessments of the sustainability of mortality levels.

     

Survival estimates of adult Sooty Terns Sterna fuscata from Bird Island, Seychelles

Sooty Tern Sterna fuscata populations on the Seychelles Islands have been exploited for human consumption of their eggs for at least the last 75 years. This has led to concern about possible declines in these populations. To address these concerns, the Seychelles Government has instituted a research and management plan to ensure the sustainability of the egg harvest. The harvest model, upon which current harvest regulations are based, was constructed with an assumed adult survival rate because there are no published Sooty Tern survival rate estimates. We fill this knowledge gap and address this assumption. We estimated adult Sooty Tern survival to be 0.91 ( SÊ  = 0.01), which was close to the estimate used in the model. This estimate is also comparable with other seabird survival estimates. In the future this estimate could be improved with higher recapture rates. In addition, further advances in models for estimating probabilities of age at first breeding, prebreeder survival and population growth should be used to best effect, by making appropriate improvements to the ring search protocol, to provide further feedback to the management programme.     

Sub-lingual oral fistulas in Sooty Terns (Onychoprion?fuscata)

Sub-lingual oral fistulas are a condition first reported in New Zealand Stitchbirds (Notiomystis cincta) in which a lesion develops on the periphery of the mandible in the oral cavity and a fistula develops through which the tongue protrudes. We report that it arises in another species, the Sooty Tern (Onychoprion fuscata), breeding on Ascension Island in the south Atlantic. We discovered five adults with oral fistulas out of a total of 13,664 adults and chicks ringed during 11 breeding seasons over 13 years. Compared with other threats to the Ascension breeding population of over 180,000 pairs of Sooty Terns, we report that oral fistulas are a minor threat to colony stability, especially because afflicted birds were incubating eggs. Nevertheless, our findings suggest that further investigations of whether the condition is sex-linked, of its pathogenesis, and of its causation would augment our knowledge of the biology of Sooty Terns; such information might also have conservation implications for our understanding of the condition in endangered Stitchbirds. We call upon ornithologists to report oral fistulas in other species, because it would seem unlikely that these are the only two species predisposed to the condition.     

Genetic differentiation between Príncipe Island and mainland populations of the grey parrot (Psittacus erithacus), and implications for conservation

The range of the grey parrot (Psittacus erithacus), one of the most heavily harvested bird species for the international pet trade, spans the forest belt of Central and West Africa and includes the oceanic island of Príncipe (Gulf of Guinea). Morphological variation led to the recognition of two mainland subspecies (P. e. erithacus and P. e. timneh). The population from Príncipe was originally described as a separate species (P. princeps) but is currently included in the nominate race. We used 1932 bp of the mitochondrial genome to clarify the genealogical affinities between the two currently-recognized mainland subspecies and the Príncipe population. Sampling included 20 individuals from Príncipe, 17 from P. e. erithacus, and 13 from P. e. timneh. We found that the two mainland subspecies form two independent lineages, having diverged up to 2.4 million years ago (Ma), and that the Príncipe population is composed of two lineages that diverged in allopatry. The most common lineage is descended from the first colonizers and evolved in isolation for up to 1.4 Ma. Contrary to current understanding, this 'Príncipe lineage' is more closely related to the timneh than to the erithacus subspecies. The second lineage consists of P. e. erithacus birds from the nearby mainland that colonized the island in recent times. The evolutionary dynamics of the grey parrot population of Príncipe are primarily characterized by isolation, with new genetic variation being added through rare immigration events. The heavily harvested Príncipe grey parrot population should therefore be treated as an independent conservation unit.     

Estimating the extent of seabird egg depredation by introduced Common Mynas on Ascension Island in the South Atlantic

Common Mynas Acridotheres tristis were introduced to the small, isolated barren island of Ascension in the tropical Atlantic Ocean in the 1880s. The founder population of 52 pairs increased at a rate of 2 % per annum. Mynas cause egg losses in other species by puncturing and consuming eggs, puncturing eggs with no consumption or displacing incubating birds that then desert viable eggs. The principal target seabirds of Mynas on Ascension Island are Sooty Terns Onychoprion fuscatus which number 388,000 birds and constitute 97 % of all seabirds on the island. Five censuses of Mynas and 20 of the Sooty Tern population were carried out between 1994 and 2015, and Myna depredation was monitored on 10 occasions between 2000 and 2008. Of all seabird eggs laid annually, we estimated that 19 % of them were depredated by c. 1000 Mynas. In declining severity of impacts of Mynas on all eggs lost, we estimated that 40 % was attributable to desertion, 39 % to puncturing eggs with no consumption and 21 % to puncturing and consumption. As far as we know, our study is the first to estimate the scale of seabird egg depredation by Mynas. Care is needed when applying our findings to other seabird populations. The scarcity of alternative food sources and the ease of locating high densities of Sooty Tern eggs on Ascension Island may have magnified the frequency of egg depredation by Mynas. That said, it is clear that Mynas are major egg predators and the severity of their impacts on native avian populations can be high.