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1.
Evidence can provide support for or against a particular biogeographical hypothesis. Treating a hypothesis as if it were evidence or an empirical observation confounds many biogeographical analyses. We focus on two recent publications that address, in part, the evolution of the biota of Sulawesi, the large Indonesian island in the centre of the Indo‐Australian Archipelago. Many biogeographical explanations are hampered by invoking simple notions of mechanism or process – dispersal and vicariance – or constraints, such as dispersal from a centre of origin, and, in so doing, dismiss more complex geological phenomena such as emergent volcanoes within island chains or composite areas as irrelevant. Moreover, they do not search for, therefore never discover, biogeographical patterns that may better explain the distribution of biota through time. 相似文献
2.
We investigated phylogenetic relationships among Otus scops owls from Socotra Island, the Arabian Peninsula and East Africa using molecular, vocalization and biometric data. The Socotra Scops Owl Otus senegalensis socotranus, currently treated as a subspecies of the African Scops Owl Otus senegalensis, is more closely related to the Oriental Scops Owl Otus sunia and to the endemic Seychelles Scops Owl Otus insularis. Considerable mitochondrial genetic distance and significant morphological differentiation from its two closest relatives, as well as its distinctive vocalizations compared with O. insularis, strongly support recognition of Socotra Scops Owl as a full species. Unexpectedly, two taxa from the Arabian Peninsula, Pallid Scops Owl Otus brucei and African Scops Owl Otus senegalensis pamelae, represent very distinct lineages; O. brucei is basal to a clade that includes taxa found in the Indo‐Malayan region and on Indian Ocean islands. In contrast, O. s. pamelae occupies a well‐supported basal position within a clade of continental Afro‐Palaearctic taxa. The uncorrected‐p genetic distance between O. s. pamelae and its closest relatives (other populations of senegalensis from mainland Africa) is c. 4%. As O. s. pamelae is also well differentiated phylogenetically, morphologically and vocally from O. s. senegalensis, we recommend its elevation to species status, as Otus pamelae. Among mainland African O. senegalensis subspecies, Ethiopian populations appear to represent the most divergent lineage, whereas other lineages from Somalia, Kenya and South Africa are poorly differentiated. The large genetic distance between the Ethiopian haplotype and other African haplotypes (3.2%) suggests that the Ethiopian Otus may represent a cryptic taxon, and we recommend that more individuals be sampled to assess the taxonomic status of this population. 相似文献
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Wolfram Mey 《Journal of Biogeography》2003,30(2):227-236
Aims To record and elucidate the phylogeny and biogeography of a species swarm of the genus Hydropsyche (Insecta, Trichoptera) in the Philippines. All species belong to the hamifera group. Location The Philippines and neighbouring areas. Methods A phylogenetic analysis based on variation of morphological characters of the male phallic apparatus. Results The species swarm is differentiated into three clades of different age. Conclusion Alternative dispersal and vicariance hypotheses are considered in an attempt to explain the colonization of the Philippine archipelago and the subsequent ramification of the group. The vicariance hypothesis based on the late Miocene accretion of continental fragments to the Philippines appears to be the most parsimonious. The evolution of the swarm occurred on the Philippines. Later on species dispersed to Borneo, Sulawesi and the Moluccas. The species swarm has undergone an adaptive radiation which enabled the simultaneous occurrence of species in the same streams. 相似文献
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RKOSY MARKUS HEISER COSMIN‐OVIDIU MANCI THOMAS SCHMITT 《Insect Conservation and Diversity》2013,6(2):145-154
Abstract. 1. While the biogeographical structuring of Europe as a whole is already relatively well understood, patterns at the more regional scale are still poorly explored. Especially the influence of differing ecological demands among species groups on regional distribution patterns is mostly unresolved. Therefore, we compare the distributions of strictly terrestrial butterflies with those of semi‐aquatic dragonflies. 2. We analysed a regionalised distribution of the 196 butterfly and 68 dragonfly taxa of Romania with cluster analyses and principal component analyses, and worked out the different faunal regions and faunal elements for this country. 3. We obtained a clear regional structuring for the butterflies (e.g. Transylvanian Basin, Carpathians, SE Romania, W/SW Romania), but only a vertical structuring in the dragonflies from the Danube lowlands to the elevations of the Carpathians. 4. This structure implies a recent distribution trigger based on ecological and climatic constraints in dragonflies with water and energy availability being of high importance. 5. The more ancient biogeographical pattern in butterflies reflects the different biogeographical elements of Europe and the connections of the Carpathian regions to the Balkan Peninsula and the Eastern European steppes, with energy being of considerably higher importance for butterfly occurrences than water availability. 相似文献
6.
M A Schillaci L Jones-Engel J E Heidrich G P Miller J W Froehlich 《American journal of physical anthropology》2001,116(4):278-284
The historical lack of field-based radiographic studies of nonhuman primates within the field of anthropology is likely due to the perceived difficulty of transporting and operating X-ray equipment. Here we present a method for taking lateral cranial radiographs of nonhuman primates in the field that is simple to employ, and that produces exposed films suitable for collection of measurement data useful for growth and development studies, as well as for investigating bone and soft-tissue pathology. Several different X-ray units, film types, and portable power sources were used, all producing suitable images of similar quality, indicating that this methodology is likely not overly sensitive to these important parameters. 相似文献
7.
To enhance the understanding of larval dispersal in marine organisms, species with a sedentary adult stage and a pelagic larval phase of known duration constitute ideal candidates, because inferences can be made about the role of larval dispersal in population connectivity. Members of the immensely diverse marine fauna of the Indo‐Malay Archipelago are of particular importance in this respect, as biodiversity conservation is becoming a large concern in this region. In this study, the genetic population structure of the pink anemonefish, Amphiprion perideraion, is analyzed by applying 10 microsatellite loci as well as sequences of the mitochondrial control region to also allow for a direct comparison of marker‐derived results. Both marker systems detected a strong overall genetic structure (ΦST = 0.096, P < 0.0001; mean Dest = 0.17; FST = 0.015, P < 0.0001) and best supported regional groupings (ΦCT = 0.199 P < 0.0001; FCT = 0.018, P < 0.001) that suggested a differentiation of the Java Sea population from the rest of the archipelago. Differentiation of a New Guinea group was confirmed by both markers, but disagreed over the affinity of populations from west New Guinea. Mitochondrial data suggest higher connectivity among populations with fewer signals of regional substructure than microsatellite data. Considering the homogenizing effect of only a few migrants per generation on genetic differentiation between populations, marker‐specific results have important implications for conservation efforts concerning this and similar species. 相似文献
8.
Anna Marcionetti Victor Rossier Joris A. M. Bertrand Glenn Litsios Nicolas Salamin 《Molecular ecology resources》2018,18(5):1092-1101
Clownfishes (or anemonefishes) form an iconic group of coral reef fishes, principally known for their mutualistic interaction with sea anemones. They are characterized by particular life history traits, such as a complex social structure and mating system involving sequential hermaphroditism, coupled with an exceptionally long lifespan. Additionally, clownfishes are considered to be one of the rare groups to have experienced an adaptive radiation in the marine environment. Here, we assembled and annotated the first genome of a clownfish species, the tomato clownfish (Amphiprion frenatus). We obtained 17,801 assembled scaffolds, containing a total of 26,917 genes. The completeness of the assembly and annotation was satisfying, with 96.5% of the Actinopterygii Benchmarking Universal Single‐Copy Orthologs (BUSCOs) being retrieved in A. frenatus assembly. The quality of the resulting assembly is comparable to other bony fish assemblies. This resource is valuable for advancing studies of the particular life history traits of clownfishes, as well as being useful for population genetic studies and the development of new phylogenetic markers. It will also open the way to comparative genomics. Indeed, future genomic comparison among closely related fishes may provide means to identify genes related to the unique adaptations to different sea anemone hosts, as well as better characterize the genomic signatures of an adaptive radiation. 相似文献
9.
The diversity of geographic scales at which marine organisms display genetic variation mirrors the biophysical and ecological complexity of dispersal by pelagic larvae. Yet little is known about the effect of larval ecology on genetic population patterns, partly because detailed data of larval ecology do not yet exist for most taxa. One species for which this data is available is Eleutheronema tetradactylum, a tropical Indo-West Pacific shorefish. Here, we use a partial sequence mitochondrial cytochrome oxidase subunit 1 (COI) marker and five microsatellite loci to survey the genetic structure of E. tetradactylum across northern Australia. Structure was found throughout the range and isolation by distance was strong, explaining approximately 87 and 64% of the genetic variation in microsatellites and mtDNA, respectively. Populations separated by as little as 15 km also showed significant genetic structure, implying that local populations are mainly insular and self-seeding on an ecological time frame. Because the larvae of E. tetradactylum have lower swimming performance and poor orientation compared with other tropical fishes, even modest larval abilities may permit self-recruitment rather than passive dispersal. 相似文献
10.
Aim To evaluate the influence of environment and biogeographical region, as a proxy for historical influence, on the ecological structure of Holarctic communities from similar environments. It is assumed that similarities among communities from similar environments in different realms are the result of convergence, whereas their differences are interpreted as being due to different historical processes. Location Holarctic realm, North America and Eurasia above 25° N. Methods Checklists of mammalian species occurring in 96 Holarctic localities were collected from published sources. Species were assigned to one of 20 functional groups defined by diet, body size and three‐dimensional use of space. The matrix composed of the frequencies of functional groups in the 96 localities is used as input data in a correspondence analysis (CA). The localities are classified into nine groups according to Bailey's ecoregions (used as a surrogate of regional climate), and the positions of the communities in the dimensions of the CA are compared in relation to ecoregion and realm. Partial regression was used to test for the relative influence of ecoregion and realm over each dimension and to evaluate the effect of biogeographical realm on the variation in the factor scores of the communities of the same ecoregion. Results In some cases, mammalian communities from areas with similar regional climates exhibit convergence in community structure, irrespective of the biogeographical realm where they are located. However, all of them are clearly subdivided into Nearctic and Palearctic subsets. Differences in the composition of the regional pools only partially explain differences in local communities between realms. Main conclusions Holarctic mammalian communities from regions with widely different climates differ in ecological structure irrespective of their biogeographical location. On the other hand, the structures of Nearctic and Palearctic communities from regions of similar climate radically differ in some features. Thus, although present climatic conditions influence community structure, contingent historic processes associated with each region also play a major role in determining community structure. 相似文献
11.
Kurt O. Reinhart Alissa Packer Wim H. Van der Putten Keith Clay 《Ecology letters》2003,6(12):1046-1050
One explanation for the higher abundance of invasive species in their non‐native than native ranges is the escape from natural enemies. But there are few experimental studies comparing the parallel impact of enemies (or competitors and mutualists) on a plant species in its native and invaded ranges, and release from soil pathogens has been rarely investigated. Here we present evidence showing that the invasion of black cherry (Prunus serotina) into north‐western Europe is facilitated by the soil community. In the native range in the USA, the soil community that develops near black cherry inhibits the establishment of neighbouring conspecifics and reduces seedling performance in the greenhouse. In contrast, in the non‐native range, black cherry readily establishes in close proximity to conspecifics, and the soil community enhances the growth of its seedlings. Understanding the effects of soil organisms on plant abundance will improve our ability to predict and counteract plant invasions. 相似文献
12.
The major biogeographic structure and affinities of the Australian chondrichthyan fauna were investigated at both interregional and intraregional scales and comparisons made with adjacent bioregions. Faunal lists were compiled from six geographical regions with species from these regions assigned to distributional classes and broad habitat categories. Australian species were further classified on provincial and bathomic structure following bioregionalization outputs from regional marine planning. About 40% of the world's chondrichthyan fauna occurs in Indo-Australasia (482 species) of which 323 species are found in Australian seas. The tropical Australian component, of which c. 46% of taxa are regional endemics, is most similar to faunas of Indonesia, New Guinea and New Caledonia. The temperate Australian component is most similar to New Zealand and Antarctica with about half of its species endemic. Highest levels of Australian endemism exist in bathomes of the outer continental shelf and upper slope. A relatively high proportion of regional endemism (57% of species) on the slope in the poorly surveyed but species-rich Solanderian unit is probably due to high levels of large-scale habitat complexity in the Coral Sea. The richness of demersal assemblages on the continental shelf and slope appears to be largely related to the spatial complexity of the region and the level of exploration. Much lower diversity off Antarctica is consistent with the pattern in teleosts. The complex chondrichthyan fauna of Australia is confirmed as being amongst the richest of the mega-diverse Indo-West Pacific Ocean. Species-level compositions of regional faunas across Indo-Australasia differ markedly because of moderate to high levels of intraregional speciation. Faunal assemblages in Australian marine provinces and bathomes differ from each other, supporting a broader pattern for fishes that underpins a marine planning framework for the region. 相似文献
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CÉCILE FAUVELOT PHILIPPE BORSA 《Biological journal of the Linnean Society. Linnean Society of London》2011,104(4):886-902
Although migratory pelagic fishes generally exhibit little geographic differentiation across oceans, as expected from their life history (broadcast spawning, pelagic larval life, swimming ability of adults) and the assumed homogeneity of the pelagic habitat, exceptions to the rule deserve scrutiny. One such exception is the narrow‐barred Spanish mackerel (Scomberomorus commerson Lacepède, 1800), where strong genetic heterogeneity at the regional scale has been previously reported. We investigated the genetic composition of S. commerson across the Indo‐West Pacific range using control‐region sequences (including previously published data sets), cytochrome b gene partial sequences, and eight microsatellite loci, to further explore its phylogeographic structure. All haplotypes sampled from the Indo‐Malay‐Papua archipelago (IMPA) and the south‐western Pacific coalesced into a clade (clade II) that was deeply separated (14.5% nucleotide divergence) from a clade grouping all haplotypes from the Persian Gulf and Oman Sea (clade I). Such a high level of genetic divergence suggested the occurrence of two sister species. Further phylogeographic partition was evident between the western IMPA and the regions sampled east and south of it, i.e. northern Australia, West Papua, and the Coral Sea. Strong allele‐frequency differences were found between local populations in the south‐western Pacific, both at the mitochondrial locus (Φst = 0.282–0.609) and at microsatellite loci ( = 0.202–0.313). Clade II consisted of four deeply divergent subclades (9.0–11.8% nucleotide divergence for the control region; 0.3–2.5% divergence at the cytochrome b locus). Mitochondrial subclades within clade II generally had narrow geographic distribution, demonstrating further genetic isolation. However, one particular haplogroup within clade II was present throughout the central Indo‐West Pacific: this haplogroup was found to be the sister group to a haplogroup restricted to West Papua and the Coral Sea, yielding evidence of recent secondary westward colonization. Such a complex structure is in sharp contrast with the generally weak phylogeographic patterns uncovered to date in other widely distributed, large pelagic fishes with pelagic eggs and larvae. We hypothesize that in S. commerson and possibly other Scomberomorus species, philopatric migration may play a role in maintaining the geographic isolation of populations by annihilating the potential consequences of passive dispersal. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 104 , 886–902. 相似文献
15.
X‐ray micro‐computed tomography scans were used to examine the caudal‐fin structure of an unusual double‐tailed deformity in an adult brown surgeonfish Acanthurus nigrofuscus from the Great Barrier Reef. In both this case and in a similar double‐tailed deformity in a juvenile Tomini surgeonfish Ctenochaetus tominiensis from the Philippines, the caudal fin was duplicated along the dorsoventral axis. Detailed examination of the A. nigrofuscus specimen revealed that the deformity was associated with duplication and reflection of the hypural plates and the posterior vertebrae, yet the fish survived to adulthood, indicating that the effects of duplication on survival may be limited. 相似文献
16.
Fabien Leprieur Patrice Descombes Michel Kulbicki David Mouillot Valeriano Parravicini Loïc Pellissier 《Ecology and evolution》2017,7(6):1996-2005
Coral reefs and their associated fauna are largely impacted by ongoing climate change. Unravelling species responses to past climatic variations might provide clues on the consequence of ongoing changes. Here, we tested the relationship between changes in sea surface temperature and sea levels during the Quaternary and present‐day distributions of coral reef fish species. We investigated whether species‐specific responses are associated with life‐history traits. We collected a database of coral reef fish distribution together with life‐history traits for the Indo‐Pacific Ocean. We ran species distribution models (SDMs) on 3,725 tropical reef fish species using contemporary environmental factors together with a variable describing isolation from stable coral reef areas during the Quaternary. We quantified the variance explained independently by isolation from stable areas in the SDMs and related it to a set of species traits including body size and mobility. The variance purely explained by isolation from stable coral reef areas on the distribution of extant coral reef fish species largely varied across species. We observed a triangular relationship between the contribution of isolation from stable areas in the SDMs and body size. Species, whose distribution is more associated with historical changes, occurred predominantly in the Indo‐Australian archipelago, where the mean size of fish assemblages is the lowest. Our results suggest that the legacy of habitat changes of the Quaternary is still detectable in the extant distribution of many fish species, especially those with small body size and the most sedentary. Because they were the least able to colonize distant habitats in the past, fish species with smaller body size might have the most pronounced lags in tracking ongoing climate change. 相似文献
17.
Williams S Apte D Ozawa T Kaligis F Nakano T 《Evolution; international journal of organic evolution》2011,65(6):1752-1771
Species trees were produced for the Indo-West Pacific (IWP) gastropod genus Lunella using MrBayes, BEAST, and *BEAST with sequence data from four genes. Three fossil records were used to calibrate a molecular clock. Eight cryptic species were recognized using statistical methods for species delimitation in combination with morphological differences. However, our results suggest caution in interpreting ESUs defined solely by the general mixed Yule Coalescent model in genera like Lunella, with lower dispersal abilities. Four almost entirely allopatric species groups were recovered that differ in ecology and distribution. Three groups occur predominantly along continental coastlines and one occurs on island arrays. Sympatric species occur only in the torquata and coronata groups along coastlines, whereas species in the cinerea group, distributed in two-dimensional island arrays, occur in complete allopatry. Dispersal along island arcs has been important in the maintenance of species distributions and gene flow among populations in the cinerea group. The emergence of new islands and their eventual subsidence over geological time has had important consequences for the isolation of populations and the eventual rise of new species in Lunella. 相似文献
18.
Merker S 《American journal of primatology》2006,68(2):111-125
Dian's tarsier Tarsius dianae, one of the smallest primates on earth, is endemic to the central regions of Sulawesi, Indonesia. To evaluate the effects of increasing land use by humans on the ranging patterns of this nocturnal insect hunter, four study plots along a gradient of anthropogenic disturbance were selected for this study. In these plots, 71 tarsiers were captured with mist nets, and 30 of these were fitted with 3.9 g radiotransmitters and subsequently tracked over the course of 2 weeks per animal. The average home ranges were 1.1-1.8 ha in size, with the smallest ranges in slightly disturbed habitat and the largest ranges in a heavily disturbed plantation. These findings coincide with different estimates of insect abundance in the study plots. Nightly travel distances were smallest in undisturbed old-growth forest and slightly increased along a gradient of human disturbance. The tarsiers were most active shortly after dusk and just before dawn. The results of this comprehensive radiotracking study on tarsiers show that T. dianae adapts its ranging behavior to the degree and type of human land use. Integrated data on home range size and travel distance indicate that slightly disturbed forest is as favorable to these animals as undisturbed habitat. However, with increasing anthropogenic effects, the living conditions of the tarsiers appear to deteriorate, resulting in the necessity for larger home and night ranges. The results of this study provide an important tool for directing conservation efforts targeted at the survival of this primate in central Sulawesi. 相似文献
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Gregor Kozlowski Sandra Bürcher Matthieu Fleury Fanny Huber 《Biodiversity and Conservation》2009,18(3):649-662
The purpose of this study was to examine the composition, distribution, ecology, and conservation status of the Atlantic elements
of the Swiss flora. About 195 Atlantic and 80 Mediterranean–Atlantic vascular plant species of the European flora have been
used as the basis for our analysis. The complete list of 3,143 taxa has been used as the reference for the Swiss flora. The
distributions of the species are illustrated in coincidence maps based on the computer database of the Data Centre of the
Swiss Flora in Geneva, Switzerland. Our study demonstrates clearly that the Atlantic flora of Europe requires a new biogeographical
appraisal. The Swiss flora comprises 66 Atlantic and Mediterranean–Atlantic taxa, which are taxonomically and ecologically
highly diverse. Switzerland contains 44% of all European Sub-Atlantic plants. This confirms the Sub-Atlantic geographical
position of Switzerland. Only one Eu-Atlantic species growing in Switzerland, Vicia orobus, can be classified as native with certainty. This species is critically endangered and merits the highest conservation priority.
Although a very alpine country, Switzerland has a relatively large number of Mediterranean–Atlantic species. The Atlantic
and Mediterranean–Atlantic plants are a very threatened group in Switzerland, with wetland plants the most imperilled ecological
group.
Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. 相似文献
20.
Hongguang Liu Shuqiang Li Alberto Ugolini Farzaneh Momtazi Zhonge Hou 《Journal of Biogeography》2018,45(4):941-951