miRNAs: Major modulators for crop growth and development under abiotic stresses

Cumulatively, biotic and abiotic stresses of various magnitudes can decrease the production of crops by 70%. miRNAs have emerged as a genetic tool with enormous potential that can be exploited to understand stress tolerance at the molecular level and eventually regulate stress in crops. Plant miRNA targets frequently fit into diverse families of TFs that control the expression of genes related to a certain trait. As key machinery in gene regulatory networks, it is agreed that a broad understanding of miRNAs will greatly increase our understanding of plant responses to environmental stresses. miRNA-led stress regulatory networks are being considered as novel tools for the development of abiotic stress tolerance in crops. At this time, we need to expand our knowledge about the modulatory role of miRNAs during environmental fluctuations. It has become exceedingly clear that with increased understanding of the role of miRNAs during stress, the techniques for using miRNA-mediated gene regulation to enhance plant stress tolerance will become more effective and reliable. In this review we present: (1) miRNAs as a potential avenue for the modulation of abiotic stresses, and (2) summarize the research progress regarding plant responses to stress. Current progress is explained through discussion of the identification and validation of several miRNAs that enhance crop tolerance of salinity, drought, etc., while missing links on different aspects of miRNAs related to abiotic stress tolerance are noted.     

Signal transduction and biotechnology in response to environmental stresses

Providing sufficient food to burgeoning population from the steadily shrinking arable land seems to be very difficult in near future and is one of the foremost challenges for plant scientists. In addition, there are several biotic and abiotic stresses which frequently encounter crop plants during various stages of life cycle, resulting in considerable yield losses. Environmental stresses, including drought, flooding, salinity, temperature (both low and high), high radiation, and xenobiotics induce toxicity, membrane damage, excessive reactive oxygen species (ROS) production, reduced photosynthesis, and altered nutrient acquisition. Several indigenous defence mechanisms (physiological and molecular) are triggered in plants on exposure to environmental cues. Enhancement of resistance of crop plants to environmental stresses has been the topic of prime interest for agriculturalists and plant scientists since long. Development of water and salinity stress-tolerant crops through genetic engineering provides an avenue towards the reclamation of farmlands that have been lost due to salinity and lack of irrigation water/rainfall. Understanding the complexity of stress tolerance mechanisms in orthodox or model plants at the genetic and molecular levels improves feasibility of enhancing tolerance of sensitive crop plants.     

Role of microorganisms in adaptation of agriculture crops to abiotic stresses

Increased incidences of abiotic and biotic stresses impacting productivity in principal crops are being witnessed all over the world. Extreme events like prolonged droughts, intense rains and flooding, heat waves and frost damages are likely to further increase in future due to climate change. A wide range of adaptations and mitigation strategies are required to cope with such impacts. Efficient resource management and crop/livestock improvement for evolving better breeds can help to overcome abiotic stresses to some extent. However, such strategies being long drawn and cost intensive, there is a need to develop simple and low cost biological methods for the management of abiotic stress, which can be used on short term basis. Microorganisms could play a significant role in this respect, if we can exploit their unique properties of tolerance to extremities, their ubiquity, genetic diversity, their interaction with crop plants and develop methods for their successful deployment in agriculture production. Besides influencing the physico-chemical properties of rhizospheric soil through production of exopolysaccharides and formation of biofilm, microorganisms can also influence higher plants response to abiotic stresses like drought, chilling injury, salinity, metal toxicity and high temperature, through different mechanisms like induction of osmo-protectants and heat shock proteins etc. in plant cells. Use of these microorganisms per se can alleviate stresses in crop plants thus opening a new and emerging application in agriculture. These microbes also provide excellent models for understanding the stress tolerance, adaptation and response mechanisms that can be subsequently engineered into crop plants to cope with climate change induced stresses.     

Salt Tolerance in Selected Vegetable Crops

Ensuring adequate food production is a major issue in the context of an increasing human population, limit to the areas of new land that can be cultivated, and loss of existing cultivated lands to abiotic stresses. Of these stresses, salinity consistently has the greatest impact in reducing the area of cultivated land, often due to inappropriate irrigation techniques. To increase food supply, there is a need to produce salt-tolerant crops, which can grow successfully on salt-affected lands. Among crops, vegetables possess a central position in the human diet because of their nutritional value providing vitamins, carbohydrates, proteins, and mineral nutrients. There are many vegetable crops of local importance around the world but others that are very widely cultivated. All of these vegetable crops are affected by salinity more or less severely. Salinity affects every aspect of vegetable crop development including their morphology, physiological function and yield. Although efforts have been made to understand the mechanisms of salt tolerance in vegetable crops, less attention has been paid to these than to the staple crops. Where attempts have been made to improve salt tolerance of vegetables, the strategies have ranged from exogenous application of fertilizers, compatible solutes or plant growth regulators, to use of advanced molecular techniques for genetic modifications. This review focuses on the responses of pea, okra, tomato, eggplant, pepper, carrot, broccoli, cauliflower, and potato to salt stress and the strategies being used to enhance their salt tolerance.     

Targeting Glycinebetaine for Abiotic Stress Tolerance in Crop Plants: Physiological Mechanism,Molecular Interaction and Signaling

In the era of climate change, abiotic stresses (e.g., salinity, drought, extreme temperature, flooding, metal/metalloid(s), UV radiation, ozone, etc.) are considered as one of the most complex environmental constraints that restricts crop production worldwide. Introduction of stress-tolerant crop cultivars is the most auspicious way of surviving this constraint, and to produce these types of tolerant crops. Several bioengineering mechanisms involved in stress signaling are being adopted in this regard. One example of this kind of manipulation is the osmotic adjustment. The quarternary ammonium compound glycinebetaine (GB), also originally referred to as betaine is a methylated glycine derivative. Among the betaines, GB is the most abundant one in plants, which is mostly produced in response to dehydration caused by different abiotic stresses like drought, salinity, and extreme temperature. Glycinebetaine helps in decreased accumulation and detoxification of ROS, thereby restoring photosynthesis and reducing oxidative stress. It takes part in stabilizing membranes and macromolecules. It is also involved in the stabilization and protection of photosynthetic components, such as ribulose-1, 5-bisphosphate carboxylase/oxygenase, photosystem II and quarternary enzyme and protein complex structures under environmental stresses. Glycinebetaine was found to perform in chaperone-induced protein disaggregation. In addition, GB can confer stress tolerance in very low concentrations, and it acts in activating defense responsive genes with stress protection. Recently, field application of GB has also shown protective effects against environmental adversities increasing crop yield and quality. In this review, we will focus on the role of GB in conferring abiotic stress tolerance and the possible ways to engineer GB biosynthesis in plants.     

Quinoa – a Model Crop for Understanding Salt-tolerance Mechanisms in Halophytes

Quinoa (Chenopodium quinoa Willd.) is an ancient Andean crop that produces edible seeds and leaves. Quinoa's tolerance to salinity and other types of abiotic stresses provides it with high potential in a world where scarcity of water and increased soil salinization are important causes of crop failures. Due to its traditionally broad cultivation area (from Colombia to southern Chile), there is a wide range of quinoa cultivars adapted to specific conditions displaying a broad genetic variability in stress tolerance. In addition, being practically unique as a halophytic seed-producing crop with amazing nutritional properties, it is ideal as a model species for investigating morphological, cellular, physiological, and bio-molecular mechanisms of salinity tolerance. This review summarizes current knowledge of genotype-dependent variability in salinity responses and adaptive salt-tolerance mechanisms in quinoa. These include anatomical features and physiological aspects, such as osmotic adjustment through accumulation of ions, osmoprotectants, and sodium loading, transport, and storage, including the activity and gene expression of plasma and vacuolar membrane transporters. Finally, current knowledge regarding the effect of salinity on the nutritional properties of quinoa is discussed.     

Induction of abiotic stress tolerance in plants by endophytic microbes

Endophytes are micro‐organisms including bacteria and fungi that survive within healthy plant tissues and promote plant growth under stress. This review focuses on the potential of endophytic microbes that induce abiotic stress tolerance in plants. How endophytes promote plant growth under stressful conditions, like drought and heat, high salinity and poor nutrient availability will be discussed. The molecular mechanisms for increasing stress tolerance in plants by endophytes include induction of plant stress genes as well as biomolecules like reactive oxygen species scavengers. This review may help in the development of biotechnological applications of endophytic microbes in plant growth promotion and crop improvement under abiotic stress conditions.

Significance and Impact of the Study

Increasing human populations demand more crop yield for food security while crop production is adversely affected by abiotic stresses like drought, salinity and high temperature. Development of stress tolerance in plants is a strategy to cope with the negative effects of adverse environmental conditions. Endophytes are well recognized for plant growth promotion and production of natural compounds. The property of endophytes to induce stress tolerance in plants can be applied to increase crop yields. With this review, we intend to promote application of endophytes in biotechnology and genetic engineering for the development of stress‐tolerant plants.     

Transgenic approaches for genetic improvement in groundnut (Arachis hypogaea L.) against major biotic and abiotic stress factors

Cultivated groundnut (Arachis hypogaea L.) is considered as one of the primary oilseed crops and a major fodder for cattle industry in most of the developing countries, owing to its rich source of protein. It is due to its geocarpic nature of growth that the overall yield performance of groundnut is hindered by several biotic and abiotic stress factors. Multidimensional attempts were undertaken to combat these factors by developing superior groundnut varieties, modified with integral mechanism of tolerance/resistance; however this approach proved to be futile, owing to inferior pod and kernel quality. As a superior alternative, biotechnological intervention like transformation of foreign genes, either directly (biolistic) or via Agrobacterium, significantly aided in the development of advanced groundnut genotypes equipped with integral resistance against stresses and enhanced yield attributing traits. Several genes triggered by biotic and abiotic stresses, were detected and some of them were cloned and transformed as major parts of transgenic programmes. Application of modern molecular biological techniques, in designing biotic and abiotic stress tolerant/resistant groundnut varieties that exhibited mechanisms of resistance, relied on the expression of specific genes associated to particular stress. The genetically transformed stress tolerant groundnut varieties possess the potential to be employed as donor parents in traditional breeding programmes for developing varieties that are resilient to fungal, bacterial, and viral diseases, as well as to draught and salinity. The present review emphasizes on the retrospect and prospect of genetic transformation tools, implemented for the enhancement of groundnut varieties against key biotic and abiotic stress factors.     

The development and application of molecular markers for abiotic stress tolerance in barley

This article represents some current thinking and objectives in the use of molecular markers to abiotic stress tolerance. Barley has been chosen for study as it is an important crop species, as well as a model for genetic and physiological studies. It is an important crop and, because of its well-studied genetics and physiology, is an excellent candidate in which to devise more efficient breeding methods. Abiotic stress work on cultivated gene pools of small grain cereals frequently shows that adaptive and developmental genes are strongly associated with responses. Developmental genes have strong pleiotropic effects on a number of performance traits, not just abiotic stresses. One concern is that much of the genetic variation for improving abiotic stress tolerance has been lost during domestication, selection and modern breeding, leaving pleiotropic effects of the selected genes for development and adaptation. Such genes are critical in matching cultivars to their target agronomic environment, and since there is little leverage in changing these, other sources of variation may be required. In barley, and many other crops, greater variation to abiotic stresses exists in primitive landraces and related wild species gene pools. Wild barley, Hordeum spontaneum C. Koch is the progenitor of cultivated barley, Hordeum vulgare L. and is easily hybridized to H. vulgare. Genetic fingerprinting of H. spontaneum has revealed genetic marker associations with site-of-origin ecogeographic factors and also experimentally imposed stresses. Genotypes and collection sites have been identified which show the desired variation for particular stresses. Doubled haploid and other segregating populations, including landrace derivatives have been used to map genetically the loci involved. These data can be used in molecular breeding approaches to improve the drought tolerance of barley. One strategy involves screening for genetic markers and physiological traits for drought tolerance, and the associated problem of drought relief-induced mildew susceptibility in naturally droughted fields of North Africa.     

Deciphering the regulatory mechanisms of abiotic stress tolerance in plants by genomic approaches

Environmental constraints that include abiotic stress factors such as salt, drought, cold and extreme temperatures severely limit crop productivity. Improvement of crop plants with traits that confer tolerance to these stresses was practiced using traditional and modern breeding methods. Molecular breeding and genetic engineering contributed substantially to our understanding of the complexity of stress response. Mechanisms that operate signal perception, transduction and downstream regulatory factors are now being examined and an understanding of cellular pathways involved in abiotic stress responses provide valuable information on such responses. This review presents genomic-assisted methods which have helped to reveal complex regulatory networks controlling abiotic stress tolerance mechanisms by high-throughput expression profiling and gene inactivation techniques. Further, an account of stress-inducible regulatory genes which have been transferred into crop plants to enhance stress tolerance is discussed as possible modes of integrating information gained from functional genomics into knowledge-based breeding programs. In addition, we envision an integrative genomic and breeding approach to reveal developmental programs that enhance yield stability and improve grain quality under unfavorable environmental conditions of abiotic stresses.     

Research Advances in Mechanisms of Turfgrass Tolerance to Abiotic Stresses: From Physiology to Molecular Biology

Turgrfass used on landscapes, parks, sports fields, and golf courses has significant ecological, environmental, and economic impacts. The economic value of seed production of turfgrasses is second to hybrid corn. The land area cultivated with turfgrass is increasing due to rapid urban development. Turfgrass is often subjected to various abiotic stresses, which cause declines in aesthetic quality, functionality and seed yield. Among abiotic stresses, drought, salinity, heat, and low temperature are the most common detrimental factors for turfgrass growth in various regions. Thorough understanding of mechanisms of turfgrass stress responses is vital for the development of superior stress-tolerant germplasm through breeding and biotechnology. Significant progress has been made in turfgrass stress physiology and molecular biology in recent decades, but research for turfgrasses generally lags behind that of the major Poaceae crops, particularly at the molecular and genomic levels. This review focuses on research advances in turfgrass stress physiology and provides an overview of limited information on gene discovery, genetic transformation, and molecular marker development for improving stress tolerance, with emphasis on drought, salinity, heat, and low temperature stress. Major growth and physiological traits associated with these stresses, as well as metabolic and molecular factors regulating various traits for turfgrass tolerance to each stress are discussed. Future research at the systems biology level and through genomic sequencing is paramount for further insights on fundamental mechanisms of turfgrass stress tolerance and for improving turfgrass tolerance to various environmental stresses.     

Developing salt-tolerant crop plants: challenges and opportunities

Soil salinity, one of the major abiotic stresses reducing agricultural productivity, affects large terrestrial areas of the world; the need to produce salt-tolerant crops is evident. Two main approaches are being used to improve salt tolerance: (i) the exploitation of natural genetic variations, either through direct selection in stressful environments or through mapping quantitative trait loci and subsequent marker-assisted selection; and (ii) the generation of transgenic plants to introduce novel genes or to alter expression levels of the existing genes to affect the degree of salt stress tolerance. Here, we discuss the challenges and opportunities provided by recently developed functional tools for the development of salt-tolerant crops.     

Genetic analysis of abiotic stress tolerance in crops

Abiotic stress tolerance is complex, but as phenotyping technologies improve, components that contribute to abiotic stress tolerance can be quantified with increasing ease. In parallel with these phenomics advances, genetic approaches with more complex genomes are becoming increasingly tractable as genomic information in non-model crops increases and even whole crop genomes can be re-sequenced. Thus, genetic approaches to elucidating the molecular basis to abiotic stress tolerance in crops are becoming more easily achievable.     

耐非生物胁迫转基因水稻的培育——现在和未来

环境胁迫严重降低了作物产量,日益减少的耕地和膨胀的人口对世界粮食安全造成了威胁。长期以来,改善作物的抗逆性一直是农业生产的主要目标。水稻是重要的粮食作物之一,培育具有抗逆性的水稻品种对全球的粮食生产将产生重要影响。在改善水稻的抗逆性方面,转基因比传统方法更有发展潜力。近年来,已有许多抗逆相关基因转入水稻并获得了一些提高抗逆性的转基因植株,文章重点讨论了耐非生物胁迫转基因水稻的研究进展。     

耐盐转基因植物研究进展

高盐是限制作物生长、发育和产量的最严重的非生物胁迫之一。长期以来,改善作物的耐盐性一直是一个伟大的目标。然而,由于耐盐反应是一个极为复杂的过程,过去,通过传统的育种和遗传工程取得的成功有限。近十年来,由于分子生物学的发展,发现了一些与耐盐相关的新基因,对于这些基因的表达方式及其在耐盐反应中的作用已逐步得到了解,这为转基因工程提供了新的材料。通过控制耐盐相关基因在植物体内的表达,已获得了一些提高耐盐性的转基因植物,展示了诱人的前景,但该领域研究仍然存在许多困难和问题,文章重点讨论耐盐转基因植物的进展。     

Breeding for abiotic stresses for sustainable agriculture

Using cereal crops as examples, we review the breeding for tolerance to the abiotic stresses of low nitrogen, drought, salinity and aluminium toxicity. All are already important abiotic stress factors that cause large and widespread yield reductions. Drought will increase in importance with climate change, the area of irrigated land that is salinized continues to increase, and the cost of inorganic N is set to rise. There is good potential for directly breeding for adaptation to low N while retaining an ability to respond to high N conditions. Breeding for drought and salinity tolerance have proven to be difficult, and the complex mechanisms of tolerance are reviewed. Marker-assisted selection for component traits of drought in rice and pearl millet and salinity tolerance in wheat has produced some positive results and the pyramiding of stable quantitative trait locuses controlling component traits may provide a solution. New genomic technologies promise to make progress for breeding tolerance to these two stresses through a more fundamental understanding of underlying processes and identification of the genes responsible. In wheat, there is a great potential of breeding genetic resistance for salinity and aluminium tolerance through the contributions of wild relatives.