Marine Biofilms as Mediators of Colonization by Marine Macroorganisms: Implications for Antifouling and Aquaculture

In the marine environment, biofilms on submerged surfaces can promote or discourage the settlement of invertebrate larvae and macroalgal spores. The settlement-mediating effects of biofilms are believed to involve a variety of biofilm attributes including surface chemistry, micro-topography, and a wide range of microbial products from small-molecule metabolites to high-molecular weight extracellular polymers. The settled organisms in turn can modify microbial species composition of biofilms and thus change the biofilm properties and dynamics. A better understanding of biofilm dynamics and chemical signals released and/or stored by biofilms will facilitate the development of antifouling and mariculture technologies. This review provides a brief account of 1) existing knowledge of marine biofilms that are relevant to settlement mediation, 2) biotechnological application of biofilms with respect to developing non-toxic antifouling technologies and improving the operation of aquaculture facilities, and 3) challenges and future directions for advancing our understanding of settlement-mediating functions of biofilms and for applying this knowledge to real-life situations.     

Rethinking Environmental Performance from a Public Health Perspective: A Comparative Industry Analysis

To date the most common measures of environmental performance used to compare industries, and by extension firms or facilities, have been quantity of pollution emitted or hazardous waste generated. Discharge information, however, does not necessarily capture potential health effects. We propose an alternative environmental performance measure that includes the public health risks of toxic air emissions extended to industry supply chains using economic input-output life-cycle assessment. Cancer risk to the U.S. population was determined by applying a damage function to the Toxic Release Inventory (TRI) as modeled by CalTOX, a multimedia multipathway fate and exposure model. Risks were then translated into social costs using cancer willingness to pay. For a baseline emissions year of 1998, 260 excess cancer cases were calculated for 116 TRI chemicals, dominated by ingestion risk from polycyclic aromatic compounds and dioxins emitted by the primary aluminum and cement industries, respectively. The direct emissions of a small number of industry sectors account for most of the U.S. population cancer risk. For the majority of industry sectors, however, cancer risk per $1 million output is associated with supply chain upstream emissions. Ranking industries by total (direct + upstream) supply chain risk per economic output leads to different conclusions about the relative hazards associated with these industries than a conventional ranking based on emissions per economic output.     

Use of Symbiosis Products from Integrated Pulp and Paper and Carbon Steel Mills: Legal Status and Environmental Burdens

This study assesses the policy/legal status of both multistream residues and potential secondary products (“symbiosis products”) and whether there could be environmental benefits associated with the utilization of residues from integrated pulp and paper and carbon steel mills as raw materials for such secondary products. Waste‐related European Union (EU) and Finnish policy and legal instruments were reviewed to identify potential constraints for, and suggested next steps in, the development of potential process industry residue‐based symbiosis products. The products were soil amendment pellets, low‐grade concrete, and mine filler. A global warming potential (GWP) assessment and an exergy analysis were applied to these potential symbiosis products. Some indicative GWP calculations of greenhouse gas emissions associating similar and/or analogous products based on virgin primary raw materials, more energy‐intensive processes, and the alternative treatment of these residues as wastes are also presented. This study addresses GWP, exergy, and legal aspects in a holistic manner to determine the potential environmental benefits of secondary products within the EU legal framework. The GWP assessment and exergy analysis indicate that the utilization of multistream residues causes very low environmental burdens in terms of GWP. The utilization option can have potential environmental benefits in terms of GWP through process replacement and avoided landfilling and waste treatment impacts, as well as potentially through emission reductions from product replacement if suitable and safe applications can be identified. Waste regulation does not define the legal requirements under which utilizing residues in such novel concepts as introduced in this study would be possible, nor how waste status could be removed and product‐based legislation be applied to the potential products instead.     

A Novel Metalloproteinase,Almelysin, from a Marine Bacterium,Alteromonas sp. No. 3696: Purification and Characterization

We have discovered a novel metalloproteinase, which has high activity at low temperatures, from the culture supernatant of a marine bacterium. The strain was identified as Alteromonas sp. No. 3696. The metalloproteinase, named almelysin, was purified to homogeneity from the cultured supernatant at 10°C by two column chromatographies. About 20 mg of purified almelysin was obtained from 18.4 liters of the culture supernatant. The molecular mass of almelysin was estimated to be 28 kDa by SDS–PAGE and the isoelectric point was 4.3. The optimum pH for activity of almelysin was pH 8.5–9.0 and 6.5 using casein and (7-methoxycoumarin-4-yl)acetyl(MOCAc)-Pro-Leu-Gly-Leu-(N³-[2,4-dinitrophenyl]-L-2,3-di-aminopropionyl)[A₂pr(Dnp)]-Ala-Arg-NH₂ as substrates, respectively. Almelysin was stable between pH 7.5–8.0 and below 40°C. The optimum temperature for the activity was observed to be 40°C using both casein and MOCAc-Pro-Leu-Gly-Leu-A₂pr(Dnp)-Ala-Arg-NH₂ as substrates. The activity of almelysin was inhibited by such metallo chelators as EDTA and o-phenanthroline, while talopeptin, phosphoramidon, and SMPI, typical metalloproteinase inhibitors, had no effect. Almelysin primarily cleaved the Ala¹⁴-Leu¹⁵ bond and Phe²⁴-Phe²⁵ bond, and secondarily the Tyr¹⁶-Leu¹⁷ bond in oxidized insulin B-chain. However, almelysin could not cleave the His⁵-Leu⁶, His¹⁰-Leu¹¹, and Gly²³-Phe²⁴ bonds, which were cleaved by other metalloproteinases. These results indicate that the substrate specificity of almelysin is different from other metalloproteinases. Interestingly, Alteromonas sp. No. 3696 strain produced another proteinase as well as almelysin at 25°C.     

Mini-Review: Nutrient Cycling in Lakes and Streams: Insights from a Comparative Analysis

Understanding of general ecosystem principles may be improved by comparing disparate ecosystems. We compared nutrient cycling in lakes and streams to evaluate whether contrasts in hydrologic properties lead to different controls and different rates of internal nutrient cycling. Our primary focus was nutrient cycling that results in increased productivity, so we quantified nutrient cycling by defining the recycling ratio (ρ) as the number of times a nutrient molecule is sequestered by producers before export. An analytic model of nutrient cycling predicted that in lakes ρ is governed by the processes that promote the mineralization and retard the sedimentation of particulate-bound nutrients, whereas in streams, ρ is governed by processes that promote the uptake and retard the export of dissolved nutrients. These differences were the consequence of contrast between lakes and streams in the mass-specific export rates (mass exported · standing stock^-1· time^-1) of dissolved and particulate nutrients. Although ρ is calculated from readily measured ecosystem variables, we found very few published data sets that provided the necessary data for a given ecosystem. We calculated and compared ρ in two well-studied P-limited ecosystems, Peter Lake and West Fork Walker Branch (WFWB). When ecosystems were scaled so that water residence time was equal between these two ecosystems, ρ was three orders of magnitude greater in WFWB. However, when we scaled by P residence time, ρ was nearly equal between these two ecosystems. This suggests broad similarities in ρ across ecosystem types when ecosystem boundaries are defined so that turnover times of limiting nutrients are the same. Received 19 November 1998; accepted 6 October 1999.     

Comparative anatomy, homologies and evolution of the pectoral muscles of bony fish and tetrapods: a new insight

The Osteichthyes, including bony fishes and tetrapods, is a highly speciose group of vertebrates, comprising more than 42,000 living species. The anatomy of osteichthyans has been the subject of numerous comparative studies, but most of these studies concern osteological structures; much less attention has been paid to muscles. The most detailed comparative analyses of osteichthyan pectoral muscles that were actually based on a direct observation of representatives of various major actinopterygian and sarcopterygian groups were provided several decades ago by authors such as Howell and Romer. Despite the quality of their work, these authors did not have access to much information that is now available. In the present work, an updated discussion on the homologies and evolution of the osteichthyan pectoral muscles is provided, based on the authors' own analyses and on a survey of the literature, both old and recent. It is stressed that much caution should be taken when the results obtained in molecular and developmental studies concerning the pectoral muscles of model actinopterygians such as the teleostean zebrafish are discussed and compared with the results obtained in studies concerning model sarcopterygians from clades such as the Amphibia and/or the Amniota. This is because, as shown here, as a result of the different evolutionary routes followed within the actinopterygian and the sarcopterygian clades none of the individual muscles found, for example, in derived actinopterygians such as teleosts is found in derived sarcopterygians such as tetrapods. It is hoped that the information provided in the present work may help in paving the way for future analyses of the pectoral muscles in taxa from different osteichthyan groups and for a proper comparison between these muscles in those taxa.     

Quantitative Analysis of Eumelanin and Pheomelanin in Humans,Mice, and Other Animals: a Comparative Review

The color of hair, skin, and eyes in animals mainly depends on the quantity, quality, and distribution of the pigment melanin, which occurs in two types: black to brown eumelanin and yellow to reddish pheomelanin. Microanalytical methods to quantify the amounts of eumelanin and pheomelanin in biological materials were developed in 1985. The methods are based on the chemical degradation of eumelanin to pyrrole‐2,3,5‐tricarboxylic acid and of pheomelanin to aminohydroxyphenylalanine isomers, which can be analyzed and quantitated by high performance liquid chromatography. This review summarizes and compares eumelanin and pheomelanin contents in various pigmented tissues obtained from humans, mice, and other animals. These methods have become valuable tools to study the functions of melanin, the control of melanogenesis, and the actions and interactions of pigmentation genes. The methods have also found applications in many clinical studies. High levels of pheomelanin are found only in yellow to red hairs of mammals and in red feathers of birds. It remains an intriguing question why lower vertebrates such as fishes do not synthesize pheomelanin. Detectable levels of pheomelanin are detected in human skin regardless of race, color, and skin type. However, eumelanin is always the major constituent of epidermal melanin, and the skin color appears to be determined by the quantity of melanin produced but not by the quality.     

Environmental Footprints and Scenario Analysis for Assessing the Impacts of the Agri‐Food Industry on a Regional Economy: A Case Study in Spain

The study of the environmental footprints of various sectors and industries is increasingly demanded by institutions and by society. In this context, the regional perspective is becoming particularly important, and even more so in countries such as Spain, where the autonomous communities have the primary responsibility for implementing measures to combat environmental degradation and promote sustainable development, in coordination with national strategies. Taking as a case study a Spanish region, Aragon, and significant economic sectors, including agriculture and the food industry, the aim of this work is twofold. First, we calculate the associated environmental footprints (of emissions and water) from the dual perspectives of production (local impacts) and consumption (final destination of the goods produced by the agri‐food industry). Second, through a scenarios analysis, based on a general equilibrium model designed and calibrated specifically for the region, we evaluate the environmental implications of changes in the agri‐food industry (changes in the export and import pattern, as well as in consumer behavior). This model provides a flexible approximation to the environmental impacts, controlling for a wider range of behavioral and economic interactions. Our results indicate that the agri‐food industry has a significant impact on the environment, especially on water resources, which must be responsibly managed in order to maintain the differential advantage that a regional economy can have, compared to other territories.