Microsatellite loci for behavioural studies of Eclectus parrot (Eclectus roratus: Aves)

Ten polymorphic microsatellite loci were isolated from the cooperatively breeding and sexually dichromatic Eclectus parrot (Eclectus roratus). Nine loci were in Hardy–Weinberg equilibrium and unlinked. One locus, Ero1, was presumed to be sex‐linked since females, the heterogametic sex, were all homozygous, whereas 72% of males were heterozygous. A DNA database search revealed that Ero8 is probably an independent isolation of the microsatellite locus AgGT83 of the parrot Amozona guildingii. With high heterozygosity (0.41–0.89) and number of alleles (two to 13), these loci should prove useful for investigating the mating system of these unusual Australasian parrots.     

Effect of the MC1R gene on sexual dimorphism in melanin‐based colorations

Variants of the melanocortin‐1 receptor (MC1R) gene result in abrupt, naturally selected colour morphs. These genetic variants may differentially affect sexual dimorphism if one morph is naturally selected in the two sexes but another morph is naturally or sexually selected only in one of the two sexes (e.g. to confer camouflage in reproductive females or confer mating advantage in males). Therefore, the balance between natural and sexual selections can differ between MC1R variants, as suggest studies showing interspecific correlations between sexual dimorphism and the rate of nonsynonymous vs. synonymous amino acid substitutions at the MC1R. Surprisingly, how MC1R is related to within‐species sexual dimorphism, and thereby to sex‐specific selection, has not yet been investigated. We tackled this issue in the barn owl (Tyto alba), a species showing pronounced variation in the degree of reddish pheomelanin‐based coloration and in the number and size of black feather spots. We found that a valine (V)‐to‐isoleucine (I) substitution at position 126 explains up to 30% of the variation in the three melanin‐based colour traits and in feather melanin content. Interestingly, MC1R genotypes also differed in the degree of sexual colour dimorphism, with individuals homozygous for the II MC1R variant being 2 times redder and 2.5 times less sexually dimorphic than homozygous individuals for the VV MC1R variant. These findings support that MC1R interacts with the expression of sexual dimorphism and suggest that a gene with major phenotypic effects and weakly influenced by variation in body condition can participate in sex‐specific selection processes.     

Testing whether macroevolution follows microevolution: Are colour differences among swans (<Emphasis Type="Italic">Cygnus</Emphasis>) attributable to variation at the <Emphasis Type="Italic">MC1R</Emphasis> locus?

Background  

The MC1R (melanocortin-1 receptor) locus underlies intraspecific variation in melanin-based dark plumage coloration in several unrelated birds with plumage polymorphisms. There is far less evidence for functional variants of MC1R being involved in interspecific variation, in which spurious genotype-phenotype associations arising through population history are a far greater problem than in intraspecific studies. We investigated the relationship between MC1R variation and plumage coloration in swans (Cygnus), which show extreme variation in melanic plumage phenotypes among species (white to black).     

Beyond mean allelic effects: A locus at the major color gene MC1R associates also with differing levels of phenotypic and genetic (co)variance for coloration in barn owls

The mean phenotypic effects of a discovered variant help to predict major aspects of the evolution and inheritance of a phenotype. However, differences in the phenotypic variance associated to distinct genotypes are often overlooked despite being suggestive of processes that largely influence phenotypic evolution, such as interactions between the genotypes with the environment or the genetic background. We present empirical evidence for a mutation at the melanocortin‐1‐receptor gene, a major vertebrate coloration gene, affecting phenotypic variance in the barn owl, Tyto alba. The white MC1R allele, which associates with whiter plumage coloration, also associates with a pronounced phenotypic and additive genetic variance for distinct color traits. Contrarily, the rufous allele, associated with a rufous coloration, relates to a lower phenotypic and additive genetic variance, suggesting that this allele may be epistatic over other color loci. Variance differences between genotypes entailed differences in the strength of phenotypic and genetic associations between color traits, suggesting that differences in variance also alter the level of integration between traits. This study highlights that addressing variance differences of genotypes in wild populations provides interesting new insights into the evolutionary mechanisms and the genetic architecture underlying the phenotype.     

A method for adjusting allele frequencies in the case of microsatellite allele drop‐out

A new method is proposed to adjust allele frequencies when allelic drop‐out is common. This method assumes Hardy–Weinberg equilibrium (HWE), and treats the problematic alleles as a one‐locus two‐allele system with dominance. By assuming that the homozygote frequency of the ‘recessive’ allele is measured correctly, we can back calculate the allele frequency of the ‘dominant’ allele, and adjust the heterozygote frequency accordingly. The drawback is that multilocus genotypes cannot be constructed and tests that use deviations from Hardy–Weinberg such as tests for bottlenecks become impossible. An example is given where a large homozygote excess (F_IS = 0.44) is adjusted to a reasonable level (F_IS = 0.046). The effect of scoring error was set in relation to sampling error and while F_IS values can be seriously biased, F_ST values are not necessarily so, if scoring error and sample size are both low. As sample size increases, the effect of scoring error increases.     

Genetic analysis and population survey of sex pheromone variation in the adzuki bean borer moth, Ostrinia scapulalis

Sexual communication in many moths occurs between females emitting a sex pheromone and males responding to it. Females of Ostrinia scapulalis (Lepidoptera: Crambidae) show a large variation in blend ratios of the two sex pheromone components (E)‐ and (Z)‐11‐tetradecenyl acetates. E type females produce a pheromone with a high percentage of (E)‐11‐tetradecenyl acetate, whereas Z type females produce the opposite blend. We established laboratory cultures of E and Z types. Females of the F₁ generation produced an intermediate blend (I type) in both reciprocal crosses of the E and Z cultures. Results of further crossing experiments suggested that the three pheromone types are primarily controlled by a single autosomal locus with two alleles. Also, analyses of the variation in pheromone blend within F₁, backcross and F₂ families suggested that other genetic factors modify the pheromone blend of the I and Z types. Investigation of the pheromone variation in natural populations at 14 localities in Japan has shown that the E type was predominant in northern Japan, whereas the pheromone was highly polymorphic in central Japan. At a locality in central Japan, the pheromone was constantly polymorphic for several years, and the pheromone type frequencies did not deviate from Hardy–Weinberg expectations, providing no evidence of selection or assortative mating between the pheromone types. Analyses of pheromone variation within families derived from feral females indicated that matings between a pair with different genotypes for pheromone production was occurring in natural populations. Overall, this study showed that the genetic basis of the pheromone variation in O. scapulalis is very similar to that in its sibling species Ostrinia nubilalis although the state of pheromone polymorphisms in natural populations appears to differ between the two species. © 2005 The Linnean Society of London, Biological Journal of the Linnean Society, 2005, 84 , 143–160.     

INTRALOCUS SEXUAL CONFLICT OVER IMMUNE DEFENSE,GENDER LOAD,AND SEX‐SPECIFIC SIGNALING IN A NATURAL LIZARD POPULATION

In species with separate sexes, antagonistic selection on males and females (intralocus sexual conflict) can result in a gender load that can be resolved through the evolution of sexual dimorphism. We present data on intralocus sexual conflict over immune defense in a natural population of free‐ranging lizards (Uta stansburiana) and discuss the resolution of this conflict. Intralocus sexual conflict arises from correlational selection between immune defense and orange throat coloration in these lizards. Males with orange throats and high antibody responses had enhanced survival, but the same trait combination reduced female fitness. This sexual antagonism persisted across the life cycle and was concordant between the juvenile and adult life stages. The opposing selective pressure on males and females is ameliorated by a negative intersexual genetic correlation (r_m,f=?0.86) for immune defense. Throat coloration was also genetically correlated with immune defense, but the sign of this genetic correlation differed between the sexes. This resulted in sex‐specific signaling of immunological condition. We also found evidence for a sex‐specific maternal effect on sons with potential to additionally reduce the gender load. These results have implications for signaling evolution, genetic integration between adaptive traits, sex allocation, and mutual mate choice for indirect fitness benefits.     

Molecular population genetics of the melanic plumage polymorphism in Arctic skuas (Stercorarius parasiticus): evidence for divergent selection on plumage colour

The Arctic skua (Stercorarius parasiticus) is a classic example of an avian plumage polymorphism, with variation in melanin‐based ventral plumage coloration defining pale, intermediate and dark morphs in adults of both sexes. However, despite several decades of field research, there is an incomplete understanding of how the polymorphism in ventral plumage colour is maintained and the selective forces involved. Here, we investigate selection on a locus (MC1R) that is strongly associated with plumage colour variation in Arctic skuas using patterns of nucleotide variation and comparison to neutral loci (nuclear introns and mtDNA). We find that three linked nonsynonymous mutations in MC1R, including the single mutation described previously, are associated with plumage colour in the Arctic skua. The position of nonsynonymous mutations on a MC1R haplotype network implies that divergent selection drove the initial evolution of the colour morphs. Comparisons of F_STs of MC1R vs. nuclear introns among five skua populations differing in proportion of dark morphs along an approximate north–south cline reveal a signature of divergent selection on MC1R. In contrast, we find limited evidence for balancing selection on MC1R within populations, although the power is low. Our results provide strong evidence for both past and ongoing selection on MC1R, and, by implication, plumage colour in Arctic skuas. The results suggest that a fruitful avenue for future ecological studies will be analysis of selection on morphs in colonies at the extremes along the morph ratio cline.     

Male red coloration,female mate preference,and sperm longevity in the cyprinid fish Puntius titteya

In recent decades, the link between the exaggeration of male sexual ornaments and ejaculate quality has received much attention. When males with conspicuous sexual ornaments have high-quality ejaculate, females are believed to obtain benefits, such as high fertilization success and offspring with good genes, by choosing mates on the basis of male ornamentation. In this study, we examined the relationships among male body coloration, female mate preference, and sperm longevity in the sexually dichromatic fish Puntius titteya. Males of this species assume a bright red coloration over the entire body, and neither sex invests in the parental care of eggs. In the female preference test, females preferred males with redder body coloration over their counterpart males with duller coloration. In addition, the sperm longevity test indicated that redder males had sperm with greater longevity. These results suggest that the red coloration of males in this species may signal sperm longevity and that females can mate with males with higher quality sperm by choosing redder males.     

Background matching,disruptive coloration,and differential use of microhabitats in two neotropical grasshoppers with sexual dichromatism

Cryptic coloration is an adaptative defensive mechanism against predators. Color patterns can become cryptic through background coloration‐matching and disruptive coloration. Disruptive coloration may evolve in visually heterogeneous microhabitats, whereas background matching could be favored in chromatically homogeneous microhabitats. In this work, we used digital photography to explore the potential use of disruptive coloration and background matching in males and females of two grasshopper species of the Sphenarium genus in different habitats. We found chromatic differences in the two grasshopper species that may be explained by local adaptation. We also found that the females and males of both species are dichromatic and seem to follow different color cryptic strategies, males are more disruptive than females, whereas females have a high background matching with less disruptive elements. The selective pressures of the predators in different microhabitats and the differences in mobility between sexes may explain the color pattern divergence between females and males. Nevertheless, more field experiments are needed in order to understand the relative importance of disruptive and background matching coloration in the evolution of sexual dichromatism in these grasshoppers.     

Identification of 20 polymorphic microsatellite loci in European crow (Corvus corone) from existing passerine loci

The European crow (Corvus corone) occurs in two subspecies (or species) with distinct plumage coloration: the black carrion crow (C. c. corone) and the grey and black hooded crow (C. c. cornix). We tested 42 passerine microsatellite loci for amplification in the European crow and identified 20 loci that were both polymorphic and easy to score. In 50 individuals sampled in the Danish part of the species’ pan‐European hybrid zone, the number of alleles ranged between two and 21. One locus deviated from Hardy–Weinberg equilibrium and had a high estimated null allele frequency. These 20 loci were highly successful in amplifying polymorphic products also in other crow populations and in another Corvidae species, the rook (Corvus frugilegus).     

Female tawny-bellied seedeaters do not prefer more colorful males in choice experiments

Plumage coloration has long been studied as a sexually selected character. The tawny-bellied seedeater, Sporophila hypoxantha, is a sexually dichromatic species, with adult males the more colorful sex and juvenile males indistinguishable from females. We did choice experiments to evaluate female preferences for males that differ in age or plumage coloration. Females were evaluated in three experiments: (1) choice between males with similar breast brightness that differed in age, (2) choice between males of 2 years of age that differed in breast brightness, and (3) choice between males of 3 or more years of age that differed in breast brightness. We also repeated the latter experiment with estradiol-treated females. We did not find a clear female preference for brighter or older males, as females spent the same proportion of time with males of similar breast brightness that differed in age or with males of similar age that differed in breast brightness. Our results do not support the hypothesis that breast brightness is a cue used by female tawny-bellied seedeaters at the time of choosing males. We propose that, in this species, male plumage coloration might play a role in intrasexual competition.     

Phylogenetic Correlation Between Male Nuptial Color and Behavioral Responses to Color Across a Diverse and Colorful Genus of Freshwater Fish (Etheostoma spp., Teleostei: Percidae)

Sexual selection theory predicts that preferences in both sexes select for the elaboration of male nuptial coloration, with empirical evidence supporting these predictions. Empirical studies are often limited in their taxonomic inclusiveness, however, and typically do not examine how male and female preferences contribute to macroevolutionary patterns of male color variation across multiple lineages in a clade. This study examined color preferences in a group of dichromatic freshwater fishes known as darters (genus Etheostoma) that vary in the presence of male coloration. The strengths of attraction to black, blue, gray, and red models were tested in females of 18 species, in addition to males of five species. We found a positive association between the presence of red or orange on the body and the amount of time associating with red models, suggesting color variation is at least in part due to variation in female preferences between species. Males also spent more time associating with colors that most closely resembled conspecifics, suggesting that preferential responses to color in males also can contribute to the diversity of nuptial coloration in darters.     

Hues of a dragon's belly: morphological correlates of ventral coloration in water dragons

Sexual dichromatism is common in lizards, and may play an important role in sex recognition and mating systems. Nonetheless, relatively few published papers provide quantitative analyses of colour, deal with Australian taxa or are based on large-bodied species. Water dragons Physignathus lesueurii (Agamidae) from eastern Australia are very large (upto 1 m total length) and sexually dichromatic, with conspicuous red ventral coloration in adult males. We quantified coloration in three ventral regions (throat, chest and abdomen) of males and females using a spectroradiometer and looked for associations of colour with sex and with morphological traits predicted to correlate with fitness (body size, body condition, relative head size and asymmetry of femoral pores). Among adult males, larger individuals showed less red on the abdomen than did smaller animals, and males with relatively large heads had darker, less red abdomens than did males with smaller heads. Among adult females, larger animals had darker chests, and less red on the abdomen and chest, than did smaller females. The similarity in these trends between the sexes, and the location of the sexually dichromatic and size-sensitive colours in an area (under the abdomen) where they presumably are not visible to other lizards cast doubt on their utility as sexual or dominance signals. Hence, although we documented significant sex and body-size effects on ventral coloration, our results suggest that ventral colours in water dragons do not function in sex-specific displays.     

Carotenoid-Based Plumage Coloration Predicts Leukocyte Parameters during the Breeding Season in Northern Cardinals (Cardinalis cardinalis)

Dichromatism in songbirds is often associated with polygyny and dimorphic parental investment, and is thought to arise via sexual selection. Northern cardinals (Cardinalis cardinalis) are not only dichromatic but also monogamous and biparental, suggesting that plumage coloration in this species may serve different functions than in more typical dichromatic species. In order to explore the role of sexual selection in the evolution of plumage coloration in cardinals, we used reflectance spectrophotometry to investigate whether two carotenoid‐based ornaments, the male’s red breast and the female’s underwing coverts, contain information that potential mates or competitors could use to assess condition. We found that whereas coloration was not related to body condition (measured as the residual body mass from a regression of body mass on wing chord), more saturated carotenoid coloration was associated with higher heterophil to lymphocyte ratios in males, and with higher white blood cell counts in females. Thus, in both sexes, carotenoid coloration was positively linked to immune measures normally associated with higher levels of stress and infection. These results do not indicate that carotenoid‐based coloration functions as a signal of low levels of stress or disease in this species. We propose instead that because plumage coloration may be related to competitiveness, the more saturated individuals increase their risk of injury, stress, and infection by engaging in more competitive behavior or by secreting more testosterone, or both. Our finding that carotenoid pigmentation is positively associated in males with the size of the cloacal protuberance, an androgen‐sensitive sex character, supports this hypothesis.     

Estimation and adjustment of microsatellite null alleles in nonequilibrium populations

Nonamplified (null) alleles are a common feature of microsatellite genotyping and can bias estimates of allele and genotype frequencies, thereby hindering population genetic analyses. The frequency of microsatellite null alleles in diploid populations can be estimated for populations that are in Hardy–Weinberg equilibrium. However, many microsatellite data sets are from nonequilibrium populations, often with known inbreeding coefficients (F) or fixation indices (F_IS or F_ST). Here, we propose a novel null allele estimator that can be used to estimate the null allele frequency and adjust visible allele frequencies in populations for which independent estimates of F, F_IS or F_ST are available. The algorithm is currently available as an Excel macro that can be downloaded at no cost from http://www.microchecker.hull.ac.uk/ and will be incorporated into the software micro ‐checker .     

Environmental variation is directly responsible for short- but not long-term variation in forest-atmosphere carbon exchange

Tower‐based eddy covariance measurements of forest‐atmosphere carbon dioxide (CO₂) exchange from many sites around the world indicate that there is considerable year‐to‐year variation in net ecosystem exchange (NEE). Here, we use a statistical modeling approach to partition the interannual variability in NEE (and its component fluxes, ecosystem respiration, R_eco, and gross photosynthesis, P_gross) into two main effects: variation in environmental drivers (air and soil temperature, solar radiation, vapor pressure deficit, and soil water content) and variation in the biotic response to this environmental forcing (as characterized by the model parameters). The model is applied to a 9‐year data set from the Howland AmeriFlux site, a spruce‐dominated forest in Maine, USA. Gap‐filled flux measurements at this site indicate that the forest has been sequestering, on average, 190 g C m⁻² yr⁻¹, with a range from 130 to 270 g C m⁻² yr⁻¹. Our fitted model predicts somewhat more uptake (mean 270 g C m⁻² yr⁻¹), but interannual variation is similar, and wavelet variance analyses indicate good agreement between tower measurements and model predictions across a wide range of timescales (hours to years). Associated with the interannual variation in NEE are clear differences among years in model parameters for both R_eco and P_gross. Analysis of model predictions suggests that, at the annual time step, about 40% of the variance in modeled NEE can be attributed to variation in environmental drivers, and 55% to variation in the biotic response to this forcing. As model predictions are aggregated at longer timescales (from individual days to months to calendar year), variation in environmental drivers becomes progressively less important, and variation in the biotic response becomes progressively more important, in determining the modeled flux. There is a strong negative correlation between modeled annual P_gross and R_eco (r=−0.93, P≤0.001); two possible explanations for this correlation are discussed. The correlation promotes homeostasis of NEE: the interannual variation in modeled NEE is substantially less than that for either P_gross or R_eco     

Bluegill Coloration as a Sexual Ornament: Evidence From Ontogeny,Sexual Dichromatism,and Condition Dependence

In aquatic environments, visual communication is expected in animals that inhabit clear, shallow waters. Here, we investigate variation in the colorful traits of bluegills, Lepomis macrochirus, to elucidate their possible function. Bluegills use alternative mating tactics whereby males develop into one of two irreversible phenotypes termed parental and cuckolder. Parentals build and defend nests and care for offspring whereas cuckolders obtain matings by sneaking copulations. We hypothesized that bluegill coloration might function as a sexual ornament in parental males and that ornamental coloration might serve as an honest indicator of male quality. We predicted that coloration should be more pronounced in parental males than in females and immature males and should be more pronounced during the breeding season. We also predicted that males in better condition should be more intensely colored than fish in poor condition. To test our predictions, we sampled 510 bluegills during the breeding and post‐breeding seasons at nine lakes in southern Ontario, Canada, in 2007. We used reflectance spectrometry to quantify the coloration of five body regions, aged and sexed each fish, and calculated Fulton’s condition factor from morphological measurements. A separate experiment showed that color did not fade several minutes post capture, suggesting that coloration could be measured reliably and consistently. We found that color was influenced by maturity, sex, and season, in the predicted direction, for three body regions (breast, cheek, and opercular flap). We also found that color varied with the condition of males such that males in better condition were darker for the sexually dichromatic ventral and facial regions. Our findings therefore suggest that some colorful traits in bluegills may serve as condition‐dependent sexual signals during the breeding season. Our research contributes to a growing appreciation of the importance of visual signaling in aquatic environments.     

Male-specific Iridescent Coloration in the Pipevine Swallowtail (Battus philenor) is Used in Mate Choice by Females but not Sexual Discrimination by Males

We investigated the potential roles in behavioral interactions of sexually dichromatic iridescent blue coloration found on the dorsal hindwing of male Pipevine Swallowtails (Battus philenor). Behavioral experiments in a large enclosure addressed whether male dorsal hindwing coloration mediated sexual recognition by males, female choice of mates, or both. Models presented to males in the enclosure produced responses that show that males discriminate females from other males using chemical but not visual cues. In contrast, ablation of male dorsal iridescence significantly reduced male mating success with virgin females in the enclosure. The results support the hypothesis that male-specific iridescent coloration in this species is a signal that is important for females in assessing either male species identity or quality in intersexual interactions.     

Intrasexual competition underlies sexual selection on male breeding coloration in the orangethroat darter,Etheostoma spectabile

Elaborate, sexually dimorphic traits are widely thought to evolve under sexual selection through female preference, male–male competition, or both. The orangethroat darter (Etheostoma spectabile) is a sexually dichromatic fish in which females exhibit no preferences for male size or coloration. We tested whether these traits affect individual reproductive success in E. spectabile when multiple males are allowed to freely compete for a female. The quality and quantity of male coloration were associated with greater success in maintaining access to the female and in spawning as the primary male (first male to participate). On the other hand, sneaking behavior showed little correlation with coloration. Male breeding coloration in E. spectabile may therefore demonstrate how intrasexual competition can be a predominant factor underlying the evolution of male ornaments.