外来种入侵的生物学与生态学基础的若干问题

外来物种的入侵及其所造成的危害已越来越为人们所认识。一个外来物种入侵一个新的生境无疑要具备一定的条件 ,尽管目前对这种条件的研究还只是初步的。首先从其自身来说 ,需要有足够的入侵性 ,这可以认为是入侵种的生物学基础 ,可能表现为具有多倍性、一定的遗传变异、杂合性或表型可塑性 ,以及不同的交配系统等 ;其次一个物种的入侵成功还取决于入侵生境的可入侵性 ,这可以认为是入侵种的生态学基础 ,而新的种间关系的形成 ,尤其是入侵种与其他种类的互惠共生关系的建成是关键。本文主要介绍了有关入侵种的生物学和生态学基础中的一些最新进展 ,希望有助于我国学者对相关研究内容的开展以及对有害外来种入侵的防治     

华山松上的斑痣盘菌

根据作者野外调查、室内研究以及查阅有关文献获得的数据,发现我国华山松Pinus armandii上斑痣盘菌科Rhytismataceae菌物6属18种,其中玉龙舟皮盘菌Ploioderma yulongense为一新种。文中对新种进行了描述、图解和讨论,编制了18个种的检索表,讨论了华山松上斑痣盘菌的生态习性及致病性。     

Bridging the gap between micro - and macro-scale perspectives on the role of microbial communities in global change ecology

In order to understand the role microbial communities play in mediating ecosystem response to disturbances it is essential to address the methodological and conceptual gap that exists between micro- and macro-scale perspectives in ecology. While there is little doubt microorganisms play a central role in ecosystem functioning and therefore in ecosystem response to global change-induced disturbance, our ability to investigate the exact nature of that role is limited by disciplinary and methodological differences among microbial and ecosystem ecologists. In this paper we present results from an interdisciplinary graduate-level seminar class focused on this topic. Through the medium of case studies in global change ecology (soil respiration, nitrogen cycling, plant species invasion and land use/cover change) we highlight differences in our respective approach to ecology and give examples where disciplinary perspective influences our interpretation of the system under study. Finally, we suggest a model for integrating perspectives that may lead to greater interdisciplinary collaboration and enhanced conceptual and mechanistic modeling of ecosystem response to disturbance.     

植物分子生态学进展(Ⅱ)——地理系统学、外来种、遗传保护及其它

从地理系统学、外来种、遗传保护、研究中的污染问题四个方面介绍了当前植物分子生态学的研究内容。分子标记在地理系统学的研究中有助于了解上一个冰期中物种避难地和冰期后的物种迁移路径 ;对于外来种 ,主要讨论了其通过杂交和渐渗杂交的方式适应新的环境 ;关于遗传保护 ,本文从四个方面强调了其重要性 ;除此之外 ,还介绍了分子生态学研究中不易察觉的污染问题并提示了转基因植物的生态影响。     

Comparison of early plasma RNA loads in different macaque species and the impact of different routes of exposure on SIV/SHIV infection

Various simian immunodeficiency virus (SIV)sm/mac and simian/human immunodeficiency virus (SHIV) strains are used in different macaque species to study AIDS pathogenesis, as well as to evaluate candidate vaccine and anti-retroviral drugs efficacy. In this study we investigated the effect of route of infection, species of macaques and nature of virus stock on early plasma viral RNA load. We monitored the plasma RNA concentrations of 63 rhesus (Macaca mulatta) and cynomolgus macaques (Macaca fascicularis) infected with well-characterised virus stocks administered either by oral, rectal, vaginal or intravenous (i.v.) routes. In SIV(mac)-infected macaques, no significant difference in plasma RNA loads was observed between the rectal, oral and i.v. routes of infection. Cynomolgus macaques developed lower steady state SIV plasma RNA concentrations compared with rhesus macaques and no significant difference was observed between rectal and i.v. routes of infection. In SHIV(89.6p)-infected macaques, no difference between species or between route of infection was observed with this particular chimeric virus.     

Comparative locomotor ecology of gibbons and macaques: Selection of canopy elements for crossing gaps

To examine functional questions of arboreal locomotor ecology, the selection of canopy elements by Bornean agile gibbons (Hylobates agilis) and long-tailed macaques (Macaca fascicularis) was contrasted, and related to locomotor behaviors. The two species, and in some cases, the macaque sexes, varied in their use of most structural elements. Although both species traveled most frequently in the main canopy layer (macaques: 56%, gibbons: 48%), the gibbons strongly preferred the emergent canopy layer and traveled higher than the macaques (31 vs. 23 m above ground) in larger trees (48 vs. 26 cm dbh). Macaques preferred to cross narrower gaps (50% were in the class 0.1–0.5 m wide) than gibbons (42% were 1.6–3.0 m wide), consistent with the maximum gap width each crossed (3.5 m for macaques, 9 m for gibbons). Macaques could cross only 12% of the gaps encountered in the main canopy, and < 5% of the gaps in each of the other four layers. In contrast, all layers appear relatively continuous for gibbons. Specialized locomotor modes were used disproportionately at the beginning and end of travel segments, further indicating that behavior was organized around gap crossings. A model is defined, the Perceived Continuity Index (PCI), which predicts the relative use of canopy strata for each species, based on the percentage of gaps a species can cross, the frequency of gaps, and median length of continuous canopy structure in each canopy layer. The results support the hypothesis that locomotor behaviors, and strategies of selecting canopy strata for travel, are strongly constrained by wide gaps between trees and are ultimately based on selection for efficient direct line travel between distant points. © 1994 Wiley-Liss, Inc.     

中国猕猴生态学研究进展

中国的灵长类学研究始于19世纪中期之后,而兴盛于20世纪80年代至今。猕猴（Macaca mulatta）是世界及中国分布最为广泛的一种非人灵长类动物,在中国境内分布于17个省（市、区）,已被列为国家二级重点保护野生动物。迄今为止,学者们已对猕猴进行了包括地理分布、种群动态、食性、社会生态、保护生态等多方面的研究。本文拟对国内有关猕猴生态学方面的研究工作进行回顾与综述,以期通过对以往工作的汇总,梳理关于猕猴的研究线索与动态,并对今后的研究有所启示。     

Feeding ecology of the long-tailed macaque(Macaca fascicularis) in Kalimantan Tengah,Indonesia

I studied long- tailed macaque (Macaca fascicularis)feeding behavior and ecology as part of a larger behavioral ecological study at the Natai Lengkuas Station, Tanjung Puting National Park, Kalimantan Tengah, Indonesia. I collected data on feeding behavior via scan sampling of all visible individuals in the focal group (approximately 800 observation hours). I established vegetational plots and monitored them monthly to determine food availability and abundance. I found long- tailed macaques to be primarily frugivorous;leaves, flowers, insects and bark provided the remainder of the diet. They used at least 33 plant species as food sources, but >60% of the diet was provided by only 5 species. Based on previous vegetational analyses, these tree species were among the highest in relative density. However, selection ratios for 19 food species indicate that 13 of them were selected more often than expected. Long- tailed macaques appear to be selective feeders but can exploit a variety of food sources during periods of food scarcity.     

Seasonal and individual predictors of diet in a free‐ranging population of mandrills

Deciphering the dietary habits of a species is central to understanding its ecology, resource requirements, and the evolution of its life history traits. Detailed information on how primates use their environment to address their nutritional needs is available for many primate species. Such basic, but necessary data are, however, fragmented for secretive primates, especially regarding direct behavioral observations of individuals. In this study, we evaluated the impact of seasonality and demographic characteristics on diet and feeding habits in the only free‐ranging population of habituated mandrills (Mandrillus sphinx), a forest‐dwelling species inhabiting the dense humid forests of Central Africa. We collected fine‐grained quantitative data on feeding behavior of 57 individually‐recognized animals of both sexes and different age classes during a 17‐month period. We identified most consumed plant species and determined their abundance in the habitat of the studied mandrills. We showed that diet in this species was extremely diverse and included approximately 150 different plant species, but also mushrooms, invertebrates, and vertebrates. This omnivorous and highly diverse diet presented, however, a clear frugivorous tendency. While we identified three food items largely consumed throughout the year, we also found a strong seasonal signature on diet that was partly, but not only, related to food availability. Age and sex also influenced feeding habits with some feeding specializations according to the individual categories considered and their associated nutritional needs. Our quantitative data provide a basis for future studies examining the nutritional and mineral content of food items, which will further elucidate important aspects of the ecology of this little studied forest primate.     

The importance of biological inertia in plant community resistance to invasion

Abstract. Insights into the ecology of historic invasions by introduced species can be gained by studying long‐term patterns of invasions by native species. In this paper, we review literature in palaeo‐ecology, forest‐stand simulation modelling, and historical studies of plant species invasions to illustrate the relevance of biological inertia in plant communities to invasion ecology. Resistance to invasion occurs in part because of environmental, demographic, and biotic factors influencing the arrival and establishment of invading species. We propose that biological inertia within the resident community is a fourth component of resistance to invasion, because of the lag time inherent in eliminating resident species and perhaps their traces after environmental conditions become suitable for invasion by immigrating species. Whether or not an introduced species invades can be conditioned by the presence of the pre‐existing community (and/or its legacy) in addition to the other biotic and abiotic factors.     

Les crustaces copepodes d'afrique catalogue et biogeographie

The various expeditions which yielded material of African copepods and the bibliography describing them, are listed. An arbitrary division of the continent into 20 sections is proposed. Biogeography and ecology of various species are discussed.

     

Niche conservatism as an emerging principle in ecology and conservation biology

The diversity of life is ultimately generated by evolution, and much attention has focused on the rapid evolution of ecological traits. Yet, the tendency for many ecological traits to instead remain similar over time [niche conservatism (NC)] has many consequences for the fundamental patterns and processes studied in ecology and conservation biology. Here, we describe the mounting evidence for the importance of NC to major topics in ecology (e.g. species richness, ecosystem function) and conservation (e.g. climate change, invasive species). We also review other areas where it may be important but has generally been overlooked, in both ecology (e.g. food webs, disease ecology, mutualistic interactions) and conservation (e.g. habitat modification). We summarize methods for testing for NC, and suggest that a commonly used and advocated method (involving a test for phylogenetic signal) is potentially problematic, and describe alternative approaches. We suggest that considering NC: (1) focuses attention on the within‐species processes that cause traits to be conserved over time, (2) emphasizes connections between questions and research areas that are not obviously related (e.g. invasives, global warming, tropical richness), and (3) suggests new areas for research (e.g. why are some clades largely nocturnal? why do related species share diseases?).     

Reconciliation in three groups of lion-tailed macaques

We studied postconflict behavior in three captive groups of lion-tailed macaques (Macaca silenus). After a conflict, we monitored the aggressee as the focal individual during a 10-min postconflict period and made control observations the following day on the same individual. Selective attraction between former opponents occurred in the first minutes of the postconflict period. The conciliatory tendency was relatively high, about 40%. Although no specific behavior was used to reconcile, postconflict contacts were especially intense and a rich repertoire of affiliative patterns was exihibited. With regard to the rate and form of reconciliation, lion-tailed macaques resemble Sulawesi macaques, which belong to the same phyletic lineage. We also discuss the possible interrelations between conciliatory patterns and other characteristics of social organization.     

Drawing ecological inferences from coincident patterns of population‐ and community‐level biodiversity

Biodiversity is comprised of genetic and phenotypic variation among individual organisms, which might belong to the same species or to different species. Spatial patterns of biodiversity are of central interest in ecology and evolution for several reasons: to identify general patterns in nature (e.g. species–area relationships, latitudinal gradients), to inform conservation priorities (e.g. identifying hotspots, prioritizing management efforts) and to draw inferences about processes, historical or otherwise (e.g. adaptation, the centre of origin of particular clades). There are long traditions in ecology and evolutionary biology of examining spatial patterns of biodiversity among species (i.e. in multispecies communities) and within species, respectively, and there has been a recent surge of interest in studying these two types of pattern simultaneously. The idea is that examining both levels of diversity can materially advance the above‐stated goals and perhaps lead to entirely novel lines of inquiry. Here, we review two broad categories of approach to merging studies of inter‐ and intraspecific variation: (i) the study of phenotypic trait variation along environmental gradients and (ii) the study of relationships between patterns of molecular genetic variation within species and patterns of distribution and diversity across species. For the latter, we report a new meta‐analysis in which we find that correlations between species diversity and genetic diversity are generally positive and significantly stronger in studies with discrete sampling units (e.g. islands, lakes, forest fragments) than in studies with nondiscrete sampling units (e.g. equal‐area study plots). For each topic, we summarize the current state of knowledge and key future directions.     

Animal movements in fire‐prone landscapes

Movement is a trait of fundamental importance in ecosystems subject to frequent disturbances, such as fire‐prone ecosystems. Despite this, the role of movement in facilitating responses to fire has received little attention. Herein, we consider how animal movement interacts with fire history to shape species distributions. We consider how fire affects movement between habitat patches of differing fire histories that occur across a range of spatial and temporal scales, from daily foraging bouts to infrequent dispersal events, and annual migrations. We review animal movements in response to the immediate and abrupt impacts of fire, and the longer‐term successional changes that fires set in train. We discuss how the novel threats of altered fire regimes, landscape fragmentation, and invasive species result in suboptimal movements that drive populations downwards. We then outline the types of data needed to study animal movements in relation to fire and novel threats, to hasten the integration of movement ecology and fire ecology. We conclude by outlining a research agenda for the integration of movement ecology and fire ecology by identifying key research questions that emerge from our synthesis of animal movements in fire‐prone ecosystems.     

Genotyping single nucleotide polymorphisms (SNPs) across species in Old World Monkeys

The development of DNA markers is becoming increasingly useful in the field of primatology for studies on paternity, population history, and biomedical research. In this study, we determine the efficacy of using cross-species amplification to identify single nucleotide polymorphisms (SNPs) in closely related species. The DNA of 93 individuals representing seven Old World Monkey species was analyzed to identify SNPs using cross-species amplification and genotyping. The loci genotyped were 653 SNPs identified and validated in rhesus macaques. Of the 653 loci analyzed, 27% were estimated to be polymorphic in the samples studied. SNPs identified at the same locus among different species (coincident SNPs) were found in six of the seven species studied with longtail macaques exhibiting the highest number of coincident SNPs (84). The distribution of coincident SNPs among species is not biased based on proximity to genes in the samples studied. In addition, the frequency of coincident SNPs is not consistent with expectations based on their phylogenetic relationships. This study demonstrates that cross-species amplification and genotyping using the Illumina Golden Gate Array is a useful method to identify a large number of SNPs in closely related species, although issues with ascertainment bias may limit the type of studies where this method can be applied.     

The rise of hyperabundant native generalists threatens both humans and nature

In many disturbed terrestrial landscapes, a subset of native generalist vertebrates thrives. The population trends of these disturbance-tolerant species may be driven by multiple factors, including habitat preferences, foraging opportunities (including crop raiding or human refuse), lower mortality when their predators are persecuted (the ‘human shield’ effect) and reduced competition due to declines of disturbance-sensitive species. A pronounced elevation in the abundance of disturbance-tolerant wildlife can drive numerous cascading impacts on food webs, biodiversity, vegetation structure and people in coupled human–natural systems. There is also concern for increased risk of zoonotic disease transfer to humans and domestic animals from wildlife species with high pathogen loads as their abundance and proximity to humans increases. Here we use field data from 58 landscapes to document a supra-regional phenomenon of the hyperabundance and community dominance of Southeast Asian wild pigs and macaques. These two groups were chosen as prime candidates capable of reaching hyperabundance as they are edge adapted, with gregarious social structure, omnivorous diets, rapid reproduction and high tolerance to human proximity. Compared to intact interior forests, population densities in degraded forests were 148% and 87% higher for wild boar and macaques, respectively. In landscapes with >60% oil palm coverage, wild boar and pig-tailed macaque estimated abundances were 337% and 447% higher than landscapes with <1% oil palm coverage, respectively, suggesting marked demographic benefits accrued by crop raiding on calorie-rich food subsidies. There was extreme community dominance in forest landscapes with >20% oil palm cover where two pig and two macaque species accounted for >80% of independent camera trap detections, leaving <20% for the other 85 mammal species >1 kg considered. Establishing the population trends of pigs and macaques is imperative since they are linked to cascading impacts on the fauna and flora of local forest ecosystems, disease and human health, and economics (i.e., crop losses). The severity of potential negative cascading effects may motivate control efforts to achieve ecosystem integrity, human health and conservation objectives. Our review concludes that the rise of native generalists can be mediated by specific types of degradation, which influences the ecology and conservation of natural areas, creating both positive and detrimental impacts on intact ecosystems and human society.     

Leaf miners: The hidden herbivores

Leaf mining is a form of endophagous herbivory in which insect larvae live and feed within leaf tissue. In this review we discuss aspects of leaf miner ecology, and the current evidence for three hypotheses relating to the evolution of this feeding guild. We also present a summary of the literature coverage relating to these herbivores, which have been relatively poorly studied compared with insects that feed externally such as sap suckers and leaf chewers. The majority of published studies concern leaf miners from the northern hemisphere, with a general focus on those species considered to be agricultural, forestry or horticultural pests. In a more detailed case study, we examine aspects of leaf miner ecology of Australian species. At least 114 species have been recorded as leaf miners in Australia in four orders: Coleoptera, Lepidoptera, Diptera and Hymenoptera. Lepidoptera and Diptera are the most speciose orders of Australian leaf miners; Hymenoptera are represented by a single endemic genus and half of all coleopteran miners are species introduced for biological control. Both the known number of leaf‐mining species in Australia and the known number of hosts have increased in recent years following new targeted surveys. Leaf miners in Australia occur in many habitats and feed on a wide variety of host plants in at least 60 families although most individual species are monophagous. Although much of the research on leaf miners in Australia has focused on species that are commercially important pests or biological control agents, studies on fundamental aspects of leaf miner ecology are increasing. We identify a number of research questions aimed at better understanding the ecology of leaf miners in Australia and elsewhere.     

Intergroup variation in stable isotope ratios reflects anthropogenic impact on the Barbary macaques (Macaca sylvanus) of Gibraltar

Interactions with humans impact many aspects of behavior and ecology in nonhuman primates. Because of the complexities of the human–nonhuman primate interface, methods are needed to quantify the effects of anthropogenic interactions, including their intensity and differential impacts between nonhuman primate groups. Stable isotopes can be used to quickly and economically assess intergroup dietary variation, and provide a framework for the development of specific hypotheses about anthropogenic impact. This study uses stable carbon and nitrogen isotope analysis to examine intraspecific variation in diet between five groups of Barbary macaques, Macaca sylvanus, in the Upper Rock Nature Reserve, Gibraltar. Analysis of hair from 135 macaques showed significant differences in δ¹³C and δ¹⁵N values between a group with minimal tourist contact and groups that were main tourist attractions. Because we observed no overt physiological or substantial behavioral differences between the groups, feeding ecology is the most likely cause of any differences in stable isotope ratios. Haphazard provisioning by tourists and Gibraltarians is a likely source of dietary variation between groups. Stable isotope analysis and observational data facilitate a deeper understanding of the feeding ecology of the Barbary macaques relevant to the role of an anthropogenic ecology for the species.     

Connections between species diversity and genetic diversity

Species diversity and genetic diversity remain the nearly exclusive domains of community ecology and population genetics, respectively, despite repeated recognition in the literature over the past 30 years of close parallels between these two levels of diversity. Species diversity within communities and genetic diversity within populations are hypothesized to co‐vary in space or time because of locality characteristics that influence the two levels of diversity via parallel processes, or because of direct effects of one level of diversity on the other via several different mechanisms. Here, we draw on a wide range of studies in ecology and evolution to examine the theoretical underpinnings of these hypotheses, review relevant empirical literature, and outline an agenda for future research. The plausibility of species diversity–genetic diversity relationships is supported by a variety of theoretical and empirical studies, and several recent studies provide direct, though preliminary support. Focusing on potential connections between species diversity and genetic diversity complements other approaches to synthesis at the ecology–evolution interface, and should contribute to conceptual unification of biodiversity research at the levels of genes and species.