A special issue on ＂Plant Molecular Biology＂

The use of molecular biology and genomics tools in plant biology research has greatly expanded our understandingof the molecular mechanisms that underlie plant development and physiology.The successful establishment of researchresources such as mutant populations has led to progress in a variety of fields,including plant reproductive develop-ment,signal transduction,hormone functions,defense responses and epigenetic control.In the future these advanceswill potentially facilitate crop improvement through molecular breeding.     

Electron Tomography in Plant Cell Biology

This review focuses on the contribution of electron tomography-based techniques to our understanding of cellular processes in plant cells. Electron microscopy techniques have evolved to provide better three-dimensional resolution and improved preservation of the subcellular components. In particular, the combination of cryofixation/freeze substitution and electron tomography have allowed plant cell biologists to image organelles and macromolecular complexes in their native cellular context with unprecedented three-dimensional resolution （4-7 nm）. Until now, electron tomography has been applied in plant cell biology for the study of cytokinesis, Golgi structure and trafficking, formation of plant endosome/prevacuolar compartments, and organization of photosynthetic membranes. We discuss in this review the new insights that these tomographic studies have brought to the plant biology field.     

Serving Our Science and Community Better

Journal of Systematics and Evolution （JSE） has just debuted with its first issue. While it continues the tradition of its predecessor, Acta Phytotaxonomica Sinica （APS）, in publishing papers in taxonomy and systematics, it is also embracing new trends in evolutionary biology to include papers in molecular evolution, evolutionary genomics, evolutionary developmental biology, evolutionary ecology, biogeography, and other related fields. We sincerely hope that this expanded journal scope will serve our science and community better. This journal has a long and rich history, It was established in 1951 by consolidating four journals that were founded by early Chinese botanists and published intermittently from the 1920＇s until the late 1940＇s： Bulletin of the Fan Memorial Institute of Biology, Botanical Series; Contributions from the Institute of Botany, National Academy of Peiping; Botanical Bulletin of Academia Sinica; and Contributions from the Biological Laboratory of the Science Society of China, Botanical Series. The journal has witnessed the founding and development of modem botany, plant taxonomy, and plant evolutionary biology in China over the last century.     

Editorial

Plants--of the botanical kind--are not often mentioned in ＇The State of the Union＇ addresses by US Presidents, but when they are, it can have global impacts on plant biology research. In the 1990s, President Clinton ridiculed government support of research on ＇plant stress＇ in one of his addresses, confusing psychological stress with the devastating effects of drought, salinity, and other environmental stresses on agricultural productivity. A decade later, President Bush mentioned the S word （switchgrass） in connection with alternatives to petroleum, thereby encouraging the US Department of Energy to invest heavily in research to understand plant cell walls and to develop efficient processes to harness the sun＇s energy, which is stored on a massive scale in plant cell walls.     

In Silico Analysis of Crop Science： Report on the First China-UK Workshop on Chips, Computers and Crops

A workshop on ＂Chips, Computers and Crops＂ was held in Hangzhou, China during September 26-27, 2008. The main objective of the workshop was to bring together China and UK scientists from mathematics, bioinformatics and plant molecular biology communities to exchange ideas, enhance awareness of each others＇ fields, explore synergisms and make recommendations on fruitful future directions in crop science. Here we describe the contributions to the workshop, and examine some conceptual issues that lie at the foundations and future of crop systems biology.     

Regulation of Actin Dynamics in Pollen Tubes： Control of Actin Polymer Level

Actin cytoskeleton undergoes rapid reorganization in response to internal and external cues. How the dynamics of actin cytoskeleton are regulated, and how its dynamics relate to its function are fundamental questions in plant cell biology. The pollen tube is a well characterized actin-based cell morphogenesis in plants. One of the striking features of actin cytoskeleton characterized in the pollen tube is its surprisingly low level of actin polymer. This special phenomenon might relate to the function of actin cytoskeleton in pollen tubes. Understanding the molecular mechanism underlying this special phenomenon requires careful analysis of actin-binding proteins that modulate actin dynamics directly. Recent biochemical and biophysical analyses of several highly conserved plant actin-binding proteins reveal unusual and unexpected properties, which emphasizes the importance of carefully analyzing their action mechanism and cellular activity. In this review, we highlight an actin monomer sequestering protein, a barbed end capping protein and an F-actin severing and dynamizing protein in plant. We propose that these proteins function in harmony to regulate actin dynamics and maintain the low level of actin polymer in pollen tubes.     

Advances in the reintroduction of rare and endangered wild plant species

Human disturbance and climate change have increased the risk of extinction for rare and endangered wild plant species.One effective way to conserve these rare and endangered species is through reintroduction.In this review,we summarize the advances in wild plant reintroduction from five perspectives:the establishment of reintroduction biology as an important tool for biodiversity conservation;the importance of genetic diversity in reintroduction;reintroduction under global climate change;recruitment limitation in reintroduction;and reintroduction and ecological restoration.In addition,we consider the future of plant reintroduction strategies.     

Journal of Systematics and Evolution: Looking forward

Systematics and evolution are the most comprehensive fields in biological sciences,and unify all areas of biology by providing a conceptual framework for interpreting biological diversity.Journal of Systematics and Evolution (JSE),established in 1951 as Acta Phytotaxonomica,has a long history of publishing papers on plant taxonomy.In 1954 (Vol.3),the journal name was changed to Acta Phytotaxonomica Sinica.Half a century later,in 2008,the current name was approved and used and the journal became all-English in 2009,with the expanded scope to include molecular evolution,evolutionary genomics,evolutionary developmental biology,evolutionary ecology,biogeography,and other related fields,beyond the core area of plant taxonomy.     

Journal of Integrative Plant Biology

正JIPB reports novel scientific discoveries related to any aspects of plant biology using integrative genetic,genomic,biochemical,molecular and systems biology approaches,and to foster communication and discussion among scientists in different areas of plant and agricultural sciences.JIPB publishes peer-reviewed papers in six categories:commentaries,invited expert reviews,letters to the editor,new resources,new technologies and research articles.     

Molecular Characterization of Plant Prevacuolar and Endosomal Compartments

Prevacuolar compartments （PVCs） and endosomal compartments are membrane-bound organelles mediating protein traffic to vacuoles in the secretory and endocytic pathways of plant cells. Over the years, great progress has been made towards our understanding in these two compartments in plant cells. In this review, we will summarize our contributions toward the identification and characterization of plant prevacuolar and endosomal compartments. Our studies will serve as important steps in future molecular characterization of PVC biogenesis and PVC-mediated protein traffickinq in plant cells.     

Wide hybridization: engineering the next leap in wheat yield

Wide hybridization and chromosome engineering constitute an active and important area of plant biology research. The insights obtained in this field have contributed significantly to the understanding of the structure and function of plant chromosomes and genomes, and to the genetic improvement of many agricultural crops. Owing to well defined genomic relationships, clearly visible metaphase chromosomes, and relatively high interspecific and intergeneric crossability, wheat and related Triticeae species form ideal experimental systems for conducting wide hybridization and chromosome engineering studies （Sears, 1972, 1981; Singh and Jauhar, 2006）. Pioneering investigations have demonstrated that the entire genome or chromatin from Triticeae relatives can be transferred into wheat genome through chromosome engineering （re- viewed by Qi et al., 2007）.     

Functional genomics of wood quality and properties

Genomics promises to enrich the investigations of biology and biochemistry. Current advancements in genomics have major implications for genetic improvement in animals, plants, and microorganisms, and for our understanding of cell growth, development, differentiation, and communication. Significant progress has been made in the understanding of plant genomics in recent years, and the area continues to     

Plant villins:Versatile actin regulatory proteins

Regulation of actin dynamics is a central theme in cell biology that is important for different aspects of cell physiology.Villin, a member of the villin/gelsolin/fragmin superfamily of proteins, is an important regulator of actin. Villins contain six gelsolin homology domains(G1–G6) and an extra headpiece domain. In contrast to their mammalian counterparts, plant villins are expressed widely, implying that plant villins play a more general role in regulating actin dynamics. Some plant villins have a de fined role in modifying actin dynamics in the pollen Invitube; most of their in vivo activities remain to be ascertained.Recently, our understanding of the functions and mechanisms of action for plant villins has progressed rapidly, primarily due to the advent of Arabidopsis thaliana genetic approaches and imaging capabilities that can visualize actin dynamics at the single filament level in vitro and in living plant cells. In this review,we focus on discussing the biochemical activities and modes of regulation of plant villins. Here, we present current understanding of the functions of plant villins. Finally, we highlight some of the key unanswered questions regarding the functions and regulation of plant villins for future research.     

Notice for Contributors

Aims and Scope Cell is a journal dvetod to the publication of the novel results in dfferent areas of animal and plant cell biology and to the promotion of the scientific exchanges between China and all other parts of the word     

New Strigolactone Analogs as Plant Hormones with Low Activities in the Rhizosphere

Strigolactones （SLs） are known not only as plant hormones, but also as rhizosphere signals for establishing symbiotic and parasitic interactions. The design of new specific SL analogs is a challenging goal in understanding the basic plant biology and is also useful to control plant architectures without favoring the development of parasitic plants. Two different molecules （23 （3＇-methyI-GR24）, 31 （thia-3＇-methyl-debranone-like molecule）） already described, and a new one （AR36）, for which the synthesis is presented, are biologically compared with the well-known GR24 and the recently identified CISA-1. These different structures emphasize the wide range of parts attached to the D-ring for the bioactivity as a plant hormone. These new compounds possess a common dimethylbutenolide motif but their structure varies in the ABC part of the molecules： 23 has the same ABC part as GR24, while 31 and AR36 carry, respectively, an aromatic ring and an acyclic carbon chain. Detailed information is given for the bioactivity of such derivatives in strigolactone synthesis or in perception mutant plants （pea rmsl and rms4, Arabidopsis max2 and, max4） for different hormonal functions along with their action in the rhizosphere on arbuscular mycorrhizal hyphal growth and parasitic weed germination.     

Hydrogen sulfide,a signaling molecule in plant stress responses

Gaseous molecules, such as hydrogen sulfide(H_2S)and nitric oxide(NO), are crucial players in cellular and(patho)physiological processes in biological systems. The biological functions of these gaseous molecules, which were first discovered and identified as gasotransmitters in animals, have received unprecedented attention from plant scientists in recent decades. Researchers have arrived at the consensus that H_2S is synthesized endogenously and serves as a signaling molecule throughout the plant life cycle.However, the mechanisms of H_2S action in redox biology is still largely unexplored. This review highlights what we currently know about the characteristics and biosynthesis of H_2S in plants. Additionally,we summarize the role of H_2S in plant resistance to abiotic stress. Moreover, we propose and discuss possible redox-dependent mechanisms by which H_2S regulates plant physiology.     

Identification and characterization of new plant microRNAs using EST analysis

Seventy-five previously known plant microRNAs (miRNAs) were classified into 14 families according to their gene sequence identity. A total of 18,694 plant expressed sequence tags (EST) were found in the GenBank EST databases by comparing all previously known Arabidopsis miRNAs to GenBank‘s plant EST databases with BLAST algorithms. After removing the EST sequences with high numbers (more than 2) of mismatched nucleotides, a total of 812 EST contigs were identified. After predicting and scoring the RNA secondary structure of the 812 EST sequences using mFold software, 338 new potential miRNAs were identified in 60 plant species, miRNAs are widespread. Some microRNAsmay highly conserve in the plant kingdom, and they may have the same ancestor in very early evolution. There is no nucleotide substitution in most miRNAs among many plant species. Some of the new identified potential miRNAs may be induced and regulated by environmental biotic and abiotic stresses. Some may be preferentially expressed in specific tissues, and are regulated by developmental switching. These findings suggest that EST analysis is a good alternative strategy for identifying new miRNA candidates, their targets, and other genes. A large number of miRNAs exist in different plant species and play important roles in plant developmental switching and plant responses to environmental abiotic and biotic stresses as well as signal transduction. Environmental stresses and developmental switching may be the signals for synthesis and regulation of miRNAs in plants. A model for miRNA induction and expression, and gene regulation by miRNA is hypothesized.     

Azolla--a model organism for plant genomic studies

The aquatic ferns of the genus Azolla are nitrogen-fixing plants that have great potentials in agricultural production and environmental conservation. Azolla in many aspects is qualified to serve as a model organism for genomic studies because of its importance in agriculture, its unique position in plant evolution, its symbiotic relationship with the N2-fixing cyanobacterium, Anabaena azollae, and its moderate-sized genome. The goals of this genome project are not only to understand the biology of the Azolla genome to promote its applications in biological research and agriculture practice but also to gain critical insights about evolution of plant genomes. Together with the strategic and technical improvement as well as cost reduction of DNA sequencing, the deciphering of their genetic code is imminent.