复合菌系降解纤维素过程中微生物群落结构的变化

为明确高效纤维素降解复合菌系降解过程中微生物群落结构的变化规律及关键的降解功能菌,利用该复合菌系对滤纸和稻秆进行生物处理,通过底物降解、微生物生长量、发酵液pH的变化情况,选择不同降解时期复合菌系提取的总DNA进行细菌16S rRNA基因扩增子高通量测序。通过分解特性试验确定在接种后培养第12、72、168 h分别作为降解初期、高峰期、末期。该复合菌系分别主要由1个门、2个纲、2个目、7个科、11个属组成。随着降解的进行,短芽胞杆菌属Brevibacillus、喜热菌属Caloramator的相对丰度逐渐降低;梭菌属Clostridium、芽胞杆菌属Bacillus、地芽胞杆菌属Geobacillus、柯恩氏菌属Cohnella的相对丰度逐渐升高;解脲芽胞杆菌属Ureibacillus、泰氏菌属Tissierella、刺尾鱼菌属Epulopiscium在降解高峰期时相对丰度最高;各时期类芽胞杆菌属Paenibacillus、瘤胃球菌属Ruminococcus的相对丰度无明显变化。上述11个主要菌属均属于厚壁菌门,具有嗜热、耐热、适应广泛pH、降解纤维素或半纤维素的特性。好氧型细菌是降解初期的主要优势功能菌,到中后期厌氧型细菌逐渐增多,并逐步取代好氧型细菌成为降解纤维素的主要细菌。     

处理石油化工废水的活性污泥中优势微生物群系及其降解效能的研究

处理石油化工废水的活性污泥中微生物以细菌为主体,霉菌、酵母菌数量较少。分离到167株细菌,主要群系为不动细菌属,假单胞菌属,产碱杆菌属、微球菌属、棒状杆菌属、芽孢杆菌属等、其中大部分菌株对苯酚、苯乙烯、丙酮、甲醇具有降解效能,尤其对苯酚、苯乙烯降解能力较强,菌株数量也较多。     

草地贪夜蛾幼虫肠道细菌的分离鉴定及纤维素降解细菌的筛选

【目的】本研究旨在明确草地贪夜蛾Spodopterafrugiperda幼虫肠道可培养细菌组成,筛选纤维素降解细菌。【方法】采用传统细菌培养及16S rDNA分子标记相结合的方法分离鉴定草地贪夜蛾幼虫肠道可培养细菌;采用刚果红染色法筛选纤维素降解细菌,并通过3,5-二硝基水杨酸(DNS)法测定不同pH(5.0-9.0)条件下的纤维素酶活力。【结果】从草地贪夜蛾幼虫中筛选分离出14种肠道细菌菌株,分别隶属放线菌门(Actinobacteria)、厚壁菌门(Firmicutes)、变形菌门(Proteobacteria)等3门11属,即谷氨酸棒杆菌属(Glutamicibacter)、肠球菌属(Enterococcus)、芽胞杆菌属(Bacillus)、葡萄球菌属(Staphylococcus)、摩根菌属(Morganella)、肠杆菌属(Enterobacter)、志贺氏菌属(Shigella)、克洛诺杆菌属(Cronobacter)、克雷伯氏菌属(Klebsiella)、沙雷氏菌属(Serratia)、苍白杆菌属(Ochrobactrum)。2株产纤维素酶细菌隶属厚壁菌门芽胞杆菌属。酶活力测定结果显示:2株纤维素降解细菌的纤维素酶在pH 6.0-8.0均有相对较高的活性,在pH 8.0时,纤维素酶活最高。【结论】草地贪夜蛾幼虫肠道中细菌种类多样,其肠道内存在纤维素降解细菌。在偏碱性条件下,纤维素降解细菌的纤维素酶活力显著高于酸性条件。研究结果丰富了纤维素降解细菌资源,在饲料生产、食品加工、化学能源等方面具有应用前景。此外,草地贪夜蛾作为重大农业害虫,其肠道有益菌群,有望成为新的防治靶标。     

不动杆菌属(Acinetobacter)细菌降解石油烃的研究进展

不动杆菌属细菌分布广泛,作为重要的石油烃降解者,在乳化和降解石油烃、降低石油烃生物毒性等方面有重要作用。本文概述了不动杆菌属细菌对烷烃、芳香烃等石油烃组分的降解,总结了该属细菌中已发现的烷烃氧化酶和芳香烃氧化酶,综述了该属细菌所分泌的表面活性剂的类型和乳化机理,讨论了固定化对该属细菌降解石油烃的影响,展望了该属细菌降解石油烃的应用前景。基于此,作者认为探索不动杆菌属细菌降解石油烃的详细机理和途径、发现关键酶、寻找遗传工具、构建基因工程菌、发掘环境友好的固定化材料,应是未来的研究重点及热点。     

不同石油污染区微生物修复技术研究

采集辽河油田不同石油污染地区的土样 ,经富集、驯化、分离、筛选 ,得到优势石油降解菌。它们分别是假单胞菌属、黄单胞菌属、黄杆菌属、节杆菌属、动胶杆菌属 ,这些菌既有普遍性 ,同时又不乏地域特色。经系统测定其生理特性及表面活性物质对其利用多环芳烃物质的影响 ,结果表明不同石油污染区土壤的理化特性与优势细菌的生理特性相关 ;表面活性剂Tween 80可使优势细菌降解菲的速率及程度均有提高。     

工业腐败微生物种属特性及抗药性分析

为科学治理工业领域中微生物对杀菌剂的抗药性,从工业产品、原料及水样中采集腐败微生物,细菌按照《常见细菌系统鉴定手册》、API鉴定系统及16SrDNA序列分析,真菌按《真菌鉴定手册》及18SrDNA序列分析分别进行鉴定;通过测定杀菌剂的最小抑制浓度(MIC)来评估微生物抗药性水平。结果显示,腐败微生物中革兰氏阴性细菌约占46.91%,主要包括假单胞菌属、肠杆菌属、气单胞菌属、克雷伯氏菌属等;革兰氏阳性菌约占32.71%,主要种属为芽孢杆菌属、微杆菌属、李斯特氏菌属及球菌等;真菌约占12%,主要包括青霉属、木霉属和曲霉属。MIC测试结果显示,主要抗药性微生物为假单胞菌属,约占33.78%,平均抗性水平达到36mg/L,且传代不稳定。结论认为,工业上微生物污染主要由细菌耐药性引起,细胞膜结构及细菌生物膜的形成在该类杀菌剂抗药性产生的过程中起重要作用。     

降解有机氯农药的微生物菌株分离筛选及应用效果

以有机氯农药 (666、DDT)作为唯一碳源的Tonomura培养基分离筛选后,得到降解 666(BHC)的主要菌株有153号 (芽孢菌属Bacillus)、411号(无色杆菌属Achromobacter)和 512号 (假单孢菌属Pseudomonas),其对 666总量的降解率分别为 59.6%、56.9%和 56%,对 β-666的降解率分别为 55.9%、57.6%和56.9%.降解DDT的主要菌株有:288号(产碱杆菌属Alcaligenes)、410号和 411号 (均为无色杆菌属),其对DDT总量的降解率分别达 5 9.0%、47.5%和 45.1%,对PP′-DDT的降解率为 59.9%、57.6%和 49.6%.将这些分离出的菌株制成复合菌剂,应用于盆栽试验和田间试验,所得到的降解效应类似于纯培养试验,表明田间应用复合菌剂,对降解农药残留是可行的.     

阿南原等跳肠道细菌的分离鉴定及降解纤维素细菌的筛选

【目的】本研究旨在确定阿南原等跳Proisotoma ananevae成虫肠道细菌的组成,并筛选降解纤维素细菌。【方法】运用传统培养与16S rDNA测序相结合方法,分离鉴定阿南原等跳成虫肠道内可培养细菌;通过羧甲基纤维素钠筛选培养基(CMC)筛选能够降解纤维素的细菌,并采用3,5-二硝基水杨酸(DNS)法测定不同pH(5.0~9.0)下的纤维素酶活力。【结果】从阿南原等跳成虫肠道共分离到20种不同的菌株,隶属于厚壁菌门(Firmicutes)、变形菌门(Proteobacteria)和放线菌门(Acinobacteria)3门的10属,即葡萄球菌属Staphylococcus,芽孢杆菌属Bacillus,Terribacillus,Advenella,赖氨酸芽孢杆菌属Lysinibacillus,节杆菌属Arthrobacter,肠杆菌属Enterobacter,Glutamicibacter,无色杆菌属Leucobacter和不动杆菌属Acinetobacte;另有1株未鉴别细菌。10株纤维素降解细菌分别隶属于厚壁菌门(Firmicutes)和放线菌门(Acinobacteria)2门的6属,即无色杆菌属Leucobacter,芽孢杆菌属Bacillus,Terribacillus,赖氨酸芽孢杆菌属Lysinibacillus,节杆菌属Arthrobacter和Glutamicibacter。酶活力测定结果显示所有纤维降解素菌株在pH 7.0~9.0之间纤维素酶活性均相对较高,且pH 8.0时酶活力最高。【结论】结果说明,阿南原等跳成虫肠道内存在复杂的细菌结构,在偏碱性条件下降解纤维素的细菌酶活力要高于酸性条件下的酶活力;跳虫作为生态系统中的分解者,其肠道内大量降解纤维素细菌的存在不仅有助于跳虫利用环境中的大分子有机物满足自身的营养等需要,同时对于饲料及工业生产也具有一定的应用价值。     

敦煌壁画色变中微生物因素的研究：Ⅰ.色变壁画的微生物类群及优势 …

通过对子煌莫高窟６个洞窟中的５１个典型变色颜料样品的微生物检测,发现其中的细菌有６个属,优势菌为芽孢杆菌属和产碱菌属;霉菌有５个属,优势菌为青霉属。将分离得到的的菌种,通过模拟试验证明,枝孢霉、黑曲霉和２种特殊细菌对壁画红色颜料变色和胶结材料的老化均起着重要作用。     

敦煌壁画色变中微生物因素的研究──Ⅰ.色变壁画的微生物类群及优势菌的检测

通过对敦煌莫高窟6个洞窟中的51个典型变色颜料样品的微生物检测,发现其中的细菌有6个属,优势菌为芽孢杆菌属和产碱菌属;霉菌有5个属,优势菌为青霉属。将分离得到的菌种,通过模拟试验证明,枝孢霉、黑曲霉和2种特殊细菌对壁画红色颜料变色和胶结材料的老化均起着重要作用。     

微生物降解农药的研究新进展*

农药中,尤其化学农药中高毒、高残留、难降解的农药是重要的环境污染物,而微生物治理农药污染是一项有效手段,几十年来,在这方面已进行了大量研究。从农药降解菌的种类、工程菌的构建、微生物降解农药的机理、降解特性、影响因素及应用效果等几方面综述了近年这些方面的研究进展,并提出农药微生物降解研究领域的发展趋势和有待进一步解决的问题。     

Microorganisms--degraders of polychlorinated biphenyls

Four strains belonging to the genus Bacillus, capable of degrading polychlorinated biphenyls (PCB), were isolated by screening the collection strains of soil bacteria, degrading a organochlorine pesticide, hexachlorocyclohexane (HCCH). A method for production of tritium-labeled PCB was developed. Consumption and degradation of PCB by the soil bacterial strains selected were studied using tritium-labeled PCB and GLC. It was demonstrated that PCB are degradable both in culture media and under in model soil samples.     

Pesticide relevance and their microbial degradation: a-state-of-art

The extensive use of pesticide causes imbalance in properties of soil, water and air environments due to having problem of natural degradation. Such chemicals create diverse environmental problem via biomagnifications. Currently, microbial degradation is one of the important techniques for amputation and degradation of pesticide from agricultural soils. Some studies have reported that the genetically modified microorganism has ability to degrade specific pesticide but problem is that they cannot introduce in the field because they cause some other environmental problems. Only combined microbial consortia of indigenous and naturally occurring microbes isolated from particular contaminated environment have ability to degrade pesticides at faster rate. The bioaugumentation processes like addition of necessary nutrients or organic matter are required to speed up the rate of degradation of a contaminant by the indigenous microbes. The use of indigenous microbial strains having plant growth activities is ecologically superior over the chemical methods. In this review, we have attempted to discuss the recent challenge of pesticide problem in soil environment and their biodegradation with the help of effective indigenous pesticides degrading microorganisms. Further, we highlighted and explored the molecular mechanism for the pesticide degradation in soil with effective indigenous microbial consortium. This review suggests that the use of pesticide degrading microbial consortia which is an eco-friendly technology may be suitable for the sustainable agriculture production.     

土壤农药污染与细菌农药-抗生素交叉抗性研究进展

土壤农药污染和细菌耐药性是环境领域研究的热点问题。近年来,越来越多的研究表明土壤农药污染与细菌农药-抗生素交叉抗性的形成有关。本文依据近年来国内外研究进展,阐述了国内外土壤中农药(杀虫剂、除草剂和杀菌剂)的污染现状,并介绍了细菌对农药的降解及抗性、细菌对抗生素的抗性以及农药-抗生素交叉抗性等问题。最后,对未来有关农药-抗生素交叉抗性的研究重点进行了展望。     

Microorganisms Degrading Polychlorinated Biphenyls

Four strains belonging to the genus Bacilluscapable of degrading polychlorinated biphenyls (PCBs) were isolated by screening collection strains of soil bacteria degrading an organochlorine pesticide, hexachlorocyclohexane (HCCH). A method for production of tritium-labeled PCBs was developed. Consumption and degradation of PCBs by the soil bacterial strains selected were studied using tritium-labeled PCBs and GLC. It was demonstrated that PCBs are degradable both in culture media and in model soil samples.     

Metabolic pathways utilized by Phanerochaete chrysosporium for degradation of the cyclodiene pesticide endosulfan.

Recent studies have shown that cultures of white rot fungi not favoring the production of lignin and manganese peroxidases are effective in degrading certain xenobiotics. In this study we have used endosulfan as a model xenobiotic to assess the enzymatic mechanisms of pesticide metabolism under ligninolytic (nutrient-deficient) and nonligninolytic (nutrient-rich) culture conditions. Rapid metabolism of this chlorinated pesticide occurred under each nutrient condition tested. However, the extent of degradation and the nature of the metabolic products differed for nutrient-deficient and nutrient-rich media. The pathways for endosulfan metabolism were characterized by analysis of the fungal metabolites produced. The major endosulfan metabolites were identified by gas chromatography-electron capture detection and gas chromatography-mass spectrometry as endosulfan sulfate, endosulfan diol, endosulfan hydroxyether, and a unknown metabolite tentatively identified as endosulfan dialdehyde. The nature of the metabolites formed indicates that this organism utilizes both oxidative and hydrolytic pathways for metabolism of this pesticide. Piperonyl butoxide, a known cytochrome P-450 inhibitor, significantly inhibited the oxidation of endosulfan to endosulfan sulfate and enhanced hydrolysis of endosulfan to endosulfan diol. We suggest that the metabolism of endosulfan is mediated by two divergent pathways, one hydrolytic and the other oxidative. Judging by the inactivity of extracellular fluid and partially purified lignin peroxidase in metabolizing endosulfan, we conclude that metabolism of this compound does not involve the action of extracellular peroxidases.     

Isolation and characterization of fenamiphos degrading bacteria

The biological factors responsible for the microbial breakdown of the organophosphorus nematicide fenamiphos were investigated. Microorganisms responsible for the enhanced degradation of fenamiphos were isolated from soil that had a long application history of this nematicide. Bacteria proved to be the most important group of microbes responsible for the fenamiphos biodegradation process. Seventeen bacterial isolates utilized the pure active ingredient fenamiphos as a carbon source. Sixteen isolates rapidly degraded the active ingredient in Nemacur 5GR. Most of the fenamiphos degrading bacteria were Microbacterium species, although Sinorhizobium, Brevundimonas, Ralstonia and Cupriavidus were also identified. This array of gram positive and gram negative fenamiphos degrading bacteria appeared to be pesticide-specific, since cross-degradation toward fosthiazate, another organophosphorus pesticide used for nematode control, did not occur. It was established that the phylogenetical relationship among nematicide degrading bacteria is closer than that to non-degrading isolates.     

2,4-D impact on bacterial communities, and the activity and genetic potential of 2,4-D degrading communities in soil

The key role of telluric microorganisms in pesticide degradation is well recognized but the possible relationships between the biodiversity of soil microbial communities and their functions still remain poorly documented. If microorganisms influence the fate of pesticides, pesticide application may reciprocally affect soil microorganisms. The objective of our work was to estimate the impact of 2,4-D application on the genetic structure of bacterial communities and the 2,4-D-degrading genetic potential in relation to 2,4-D mineralization. Experiments combined isotope measurements with molecular analyses. The impact of 2,4-D on soil bacterial populations was followed with ribosomal intergenic spacer analysis. The 2,4-D degrading genetic potential was estimated by real-time PCR targeted on tfdA sequences coding an enzyme specifically involved in 2,4-D mineralization. The genetic structure of bacterial communities was significantly modified in response to 2,4-D application, but only during the intense phase of 2,4-D biodegradation. This effect disappeared 7 days after the treatment. The 2,4-D degrading genetic potential increased rapidly following 2,4-D application. There was a concomitant increase between the tfdA copy number and the 14C microbial biomass. The maximum of tfdA sequences corresponded to the maximum rate of 2,4-D mineralization. In this soil, 2,4-D degrading microbial communities seem preferentially to use the tfd pathway to degrade 2,4-D.     

Cometabolic biotransformation of fenpropathrin by Clostridium species strain ZP3

A novel bacterial strain capable of degrading the pyrethroid pesticide fenpropathrin was isolated from mixed wastewater and sludge samples. Phylogenetic analysis of the 16S rDNA sequence revealed that the organism belongs to the genus Clostridium. The organism can co-metabolically transform fenpropathrin at 100?mg?l(-1) at 35°C and pH 7.5 in 12?days. Metabolic products of fenpropathrin from strain ZP3 were examined by gas chromatography/mass spectrometry, and the results showed that the organism degraded fenpropathrin with an oxidization process to yield benzyl alcohol, benzenemethanol, 3,5-dimethylamphetamine. Analyses of cell-free extracts from this strain showed that the optimal degrading conditions for degrading fenpropathrin were 35°C and pH 7.5, and degradation efficiency was 20.0?mg?l(-1)?day(-1), and it might be potential using for rapid treating fenpropathrin, for example, on the surface of fruits and vegetables.     

微生物对拟除虫菊酯类农药残留的生物修复

拟除虫菊酯类农药是一类高效、广谱农药,且具有低毒性和能被生物降解之特性,但其残留却给人们的健康带来了巨大的威胁,如何有效地去除其残留成为摆在环境工作者面前的一项重大课题。以生物修复为理论基础的农药残留降解菌技术为解决这一难题带来了新思路,该方法操作简便、经济实用,在国内外均成为环境工作者的研究热点。