Macroinvertebrates associated with Chara in a tropical coastal lagoon (Imboassica lagoon,Rio de Janeiro,Brazil)

Imboassica lagoon is an urban coastal lagoon located in the municipality of Macaé (RJ), which has been exposed to a process of artificial eutrophication through the inflow of untreated sewage, as well as artificial openings of the sandbar that separates it from the ocean, provoking drastic modifications in this ecosystem. The sampling for the analysis of the community of macroinvertebrates associated with Charopyceae (Chara angolensis e C. fibrosa) were performed between October 1995 and October 1997, with a total of 9 samplings at two sampling stations: one located in the innermost area of the lagoon and another at the mouth of the main sewage channel, close to the sandbar. Throughout this period, four artificial sandbar-opening events were recorded, resulting in changes in the biomass of the macroalgae and in the densities of the macroinvertebrate populations. Through the analysis of the density of organisms per square meter, and density of organisms per 100 g dry weight of Chara, it was established that the biomass of the macroalgae has a direct influence on the density of the associated macrofauna. The greater development of the periphytic community in the area close to the inflow of sewage allows for the development of a community of macroinvertebrates with high densities, composed mainly of scraping organisms, such as the mollusc Heleobia australis (Hidrobiidae).     

Spatial structure of fish assemblages in a tropical estuarine lagoon: combining multivariate and geostatistical techniques

The spatial structure and seasonal changes of estuarine fish assemblages in the Ciénaga Grande de Santa Marta (CGSM) were analysed based on four seasonal comprehensive surveys conducted in 1993-1994 and 1997. Geostatistical and multivariate techniques were used to: (a) determine seasonal changes in spatial distribution of the species richness, and (b) identify assemblages of estuarine fish and their relation to abiotic factors. Potential biotic interactions affecting the assemblage structure were also explored. A total of 11075 individuals representing 39 species were collected, with Eugerres plumieri, Diapterus rhombeus, Micropogonias furnieri, Mugil incilis, Cathorops spixii, Elops saurus and Anchovia clupeoides as dominant species between seasons. Spatial distribution of fish richness differed between rainy and dry seasons in each year, whereas species mapping showed spatial patchiness in 1993-1994 and gradients during 1997. Strong evidence of species saturation was found in all seasons, suggesting biotic interactions limiting species richness at a threshold density of ca. 50 ind./5000 m². Marine, marine-estuarine and freshwater species were classified in each season according to their capability to cope with salinity fluctuations. Associations defined by functional feeding guilds were also identified. Empirical and statistic evidence showed that fish assemblages differed between seasons within each year, and each assemblage was always dominated by a small number of species, notably E. plumieri in both years 1993-1994 and 1997. Between-season differences in fish assemblage structure in the CGSM seem to be driven by abiotic factors; however, evidence of species saturation could suggest the existence of density-dependent factors operating together.     

Investigation of bacterial diversity in Brazilian tropical estuarine sediments reveals high actinobacterial diversity

Phylogenetic and statistical analyses of 16S rRNA gene libraries were used for the investigation of actinobacterial communities present in two tropical estuarine sediments (Santos-São Vicente estuary, Brazil). The libraries were constructed from samples collected at the brackish end of the estuary, highly hydrocarbon-contaminated, and at the marine end, uncontaminated. Clones from the marine end of the estuary were all related to sequences from non-cultured Actinobacteria and unidentified bacteria recovered from a wide range of environmental samples, whereas clones from the brackish end were mainly related to sequences from cultured Actinobacteria. Statistical analyses showed that the community recovered from the hydrocarbon-contaminated sediment sample, at the brackish end, was less diverse than the uncontaminated one, at the marine end, and that the communities from the two libraries were differently structured, suggesting that these may have not originated from the same community. The recognition of the spatial pattern of actinobacterial distribution in a natural environment is a first step towards understanding the way these communities are organized, providing valuable data for further investigations of their taxonomic and functional diversity.     

Pollinator diversity affects plant reproduction and recruitment: the tradeoffs of generalization

One outstanding and unsolved challenge in ecology and conservation biology is to understand how pollinator diversity affects plant performance. Here, we provide evidence of the functional role of pollination diversity in a plant species, Erysimum mediohispanicum (Brassicaceae). Pollinator abundance, richness and diversity as well as plant reproduction and recruitment were determined in eight plant populations. We found that E. mediohispanicum was generalized both at the regional and local (population) scale, since its flowers were visited by more than 100 species of insects with very different morphology, size and behaviour. However, populations differed in the degree of generalization. Generalization correlated with pollinator abundance and plant population size, but not with habitat, ungulate damage intensity, altitude or spatial location. More importantly, the degree of generalization had significant consequences for plant reproduction and recruitment. Plants from populations with intermediate generalization produced more seeds than plants from populations with low or high degrees of generalization. These differences were not the result of differences in number of flowers produced per plant. In addition, seedling emergence in a common garden was highest in plants from populations with intermediate degree of generalization. This outcome suggests the existence of an optimal level of generalizations even for generalized plant species.     

Facilitation of seedling establishment by an endemic shrub in tropical coastal sand dunes

Facilitation is predicted to occur on coastal sand dunes as these ecosystems have the harsh physical conditions common during primary succession. In a tropical dune system on the Gulf of Mexico the spatial patterns of plant distribution were analyzed and the hypothesis that facilitation is the responsible mechanism was tested by monitoring changes in the micro-environment and performing a seedling planting experiment under natural conditions. Densities of seedlings and adults of late colonizer grasses were two to six times greater beneath the early colonizer shrub, Chamaecrista chamaecristoides, than in the exposed areas. Temperatures on the sand surface, wind speed and sand accretion were significantly reduced by the shade of Chamaecrista. Only phosphate contents during the dry season were significantly higher in sand in the shade than in exposed sand. In the field experiment, successful establishment of seedlings of two late colonizer grasses (Trachypogon plumosus and Schizachyrium scoparium) was low but was concentrated exclusively beneath the shrubs. The introduced plants were reproductive one year after onset of the experiment and remained vigorous after three years. The observed spatial aggregation among the target species may be a result of improved conditions in the shade of the shrub, which facilitated the survival and establishment of late colonizers. On top of the environmental amelioration, protection from recurrent disturbances such as substrate mobility is an additional beneficial effect of the shrub.     

Spatial structure and genetic diversity of three tropical tree species with different habitat preferences within a natural forest

Analyses of the spatial distribution pattern, spatial genetic structure and genetic diversity were carried out using a 33-ha plot in a hill dipterocarp forest for three dipterocarps with different habitat preferences, i.e. Shorea curtisii on the ridges, Shorea leprosula in the valleys and Shorea macroptera both on the ridges and in the valleys. The significant spatial aggregation in small-diameter trees of all the three species was explained by limited seed dispersal. At the large-diameter trees, only S. macroptera showed random distribution and this might further prove that S. macroptera is habitat generalist, whilst S. curtisii and S. leprosula are habitat specific. The levels of genetic diversity estimated based on five microsatellite loci were high and comparable in all the three studied species. As the three studied species reproduced mainly through outcrossing, the observed high levels of genetic diversity might support the fact that the plant mating system can be used as guideline to infer the levels of genetic diversity, regardless of whether the species is habitat specific or habitat generalist. The lack of spatial genetic structure but significant aggregation in the small-diameter trees of all the three species might indicate limited seed dispersal but extensive pollen flow. Hence, if seed dispersal is restricted but pollen flow is extensive, significant spatial aggregation but no spatial genetic structure will be observed at the small-diameter trees, regardless of whether the species is habitat specific or habitat generalist. The inferred extensive pollen flow might indicate that energetic pollinators are involved in the pollination of Shorea species in the hill dipterocarp forests.     

The diversity of Linnaean communities: a way of detecting invertebrate groups at risk of extinction

Summary As ecologists use changes in the relative abundances of species to detect environmental stress in ecological communities, it is possible to do the same for higher taxa (‘Linnaean communities’) by examining the distribution of species between genera. Using an adaptation of Simpson’s diversity index (D), we predict that, like ecological communities, mature Linnaean communities have D values >0.8 and developing and relictual communities have D values <0.8. We show that D values for seven Australian weevil taxa, three indicated to be mature (Amycterini, Aterpini, Leptopiina), two relictual (Nemonychidae, Belinae) and two actively radiating groups (Gonipterini, Cyphicerina), are as predicted. Apparently subdivision of niche space has the same statistical effects in stressed Linnaean communities as it does in ecological communities, with firstly the loss of species in genera with intermediate numbers of species followed by the loss of monotypic genera. Clearly therefore, the protection of monotypic genera in Linnaean communities with low D values should be the highest conservation priority as these are at the highest risk of extinction, while monotypic genera in high-D communities are not at such high risk. Similarly, the geographical distribution of monotypic genera in Linnaean communities with low D values, rather than that of rare species (most of which will be in genera with many species), may constitute a useful way of identifying areas of conservation concern. CSIRO’s right to retain a nonexclusive, royalty-free licence in and to any copyright is acknowledged.     

Microclimatic changes and the indirect loss of ant diversity in a tropical agroecosystem

Recent changes in the coffee agroecosystem of Costa Rica were used to study the mechanism of biodiversity loss in transforming agroecosystems, focusing on the ground-foraging ant community. Coffee farms are being transformed from vegetationally diverse shaded agroforestry systems to unshaded coffee monocultures. We tested the hypothesis that the high-light environment and lack of leaf litter cover in the unshaded system are the determinants of the differences in ground-foraging ant diversity. Four treatments were established within the light gaps of a shaded plantation: shade, leaf litter, shade plus leaf litter, and a control (no shade or leaf litter added). Ants were sampled using tuna fish baits and light and temperature were measured. Shade and leaf litter had a significant effect on the ant fauna but probably for indirect reasons having to do with species interactions. In both shade treatments, Solenopsis geminata, the tropical fire ant, decreased significantly while the other species increased. The possibility that the physical factor changes the nature of competitive interactions between the most abundant species is discussed.     

Isolation and structural elucidation of a growth stimulant for arbuscular mycorrhizal fungus from Laminaria japonica Areschoug

Arbuscular Mycorrhizal (AM) fungi enhance terrestrial plant growth by forming a symbiotic relationship with the roots of its host plant. A growth stimulant for AM fungi was isolated from a brown alga Laminaria japonica Areschoug. The active substance for in vitro AM hyphal growth was isolated from 75% methanol extracts of L. japonica using a succession of chromatographic procedures, including flash chromatography equipped with an octa decyl silane (ODS) column, gel filtration chromatography and HPLC using an ODS column. Spores of Gigaspora margarita Becker & Hall, an AM fungus, were exposed to the compound in vitro, and hyphal growth of G. margarita was measured after two weeks of incubation. At 40 mg L⁻¹, the compound significantly stimulated the in vitro hyphal growth of G. margarita, compared to the control. This compound was elucidated as 5′-deoxy-5′-methylamino-adenosine by EIMS and NMR spectrum.     

Life cycle and production of Hydrobia acuta Drap. (Gastropoda: Prosobranchia) in a hypersaline coastal lagoon

The life cycle and annual production of Hydrobia acuta was studied in a hypersaline lagoon (s = 39 in summer), forming a part of solar salt works. Quantitative random samples were taken at regular intervals over a period of 15 months using a corer, and snails collected were counted and measured. Weight and biomass was calculated from a length-weight relationship and from measurements of ash content. H. acuta was a strictly annual species in the study lagoon. Recruitment takes place over a brief period in May and June, after which the breeding population dies. Growth of the new generation was slow during summer, probably due to the unfavourably high salinity. A period of rapid growth took place in autumn coinciding with a drop in salinity caused by rainfall. In winter Hydrobia hibernated by burrowing deeply into the sediment. Growth recommenced in spring when the lagoon was reflooded, but by this time the number of survivors was low.The maximum density of snails was 6 000 m^–2 and maximum biomass 500 mg organic dry wt · m^–2. Annual cohort production was estimated as 786 mg organic dry wt · m^–2 · a^–1. These figures are low compared to other studies on hydrobiid snails, and for production in inland waters, but the value for annual P/B = 4.5 is typical for a univoltine species. The relevance of the results to foraging by wading birds (the main consumers), is discussed.     

Eleocharis mutata (L.) Roem. et Schult. subject to drawdowns in a tropical coastal lagoon,State of Rio de Janeiro,Brazil

This investigation of the aquatic macrophyte Eleocharis mutata (L.) Roem. Et Schult. was carried out in Imboassica lagoon, a coastal lagoon in Macaé (22°50S; 44°42W), in the northern part of Rio de Janeiro, Brazil. The sandbar separating this lagoon from the ocean has been opened several times for flood control and to allow the entrance of marine species of commercial interest. The barrier bar has been breached without appropriate planning, and the consequences of breaching for the lagoon ecosystem are poorly understood. These openings drastically affect the structure and functioning of the lagoon, but there are no data on possible effects on macrophyte communities. In this project, we obtained data on the increase of the distribution, biomass accumulation and production rates of E. mutata in the establishment of a new stand, in an effort to relate effects of sandbar breach events to the expansion of this species. During 22 months of sampling, 4 breachings of the sandbar occurred, and E. mutata increased its area of coverage by about 810⁴ m², or 2.5% of the total area of the lagoon. The total aerial biomass reached a maximum of 1515 g DW m^–2, and the underground biomass reached 583 g DW m^–2. During the establishment and development of the stand, both dead and live aerial biomass and underground biomass tended to accumulate. Aerial net primary production (ANPP) was quite variable, reaching a maximum of 18.9 g DW m^–2 d^–1. We conclude that the sudden variations in water level caused by breaches in the sandbar were beneficial to the expansion of this species in Imboassica lagoon.     

Spatial changes in carbon and nitrogen stable isotopes of the plankton food web in a saline lake ecosystem

We investigated spatial changes in the isotope ratios of the plankton food web in Lake Chany, Siberia, Russia, especially at an estuarine transition zone of the lake. The δ¹³C values of particulate organic matter (POM) varied among the sampling sites, and increased with increasing pH of the lake water. This may reflect a shift by phytoplankton from using CO₂ to using bicarbonate for photosynthesis with increasing pH. The δ¹³C values of zooplankton community also changed at each site along with those of the POM. This was indicative of carbon isotope changes of plankton food webs between the stations along an environmental gradient.     

Towards a Complex, Plural and Dynamic Approach to Diversity: Rejoinder to Myers and Patil, Podani, and Sarkar

This reply paper includes two brief remarks in rejoinder to the commentary papers of Myers and Patil, Podani, and Sarkar. The first observation concerns the fundamental nature of ecological diversity measures, while the second one specifically addresses some interesting mathematical connections between α- and β-diversity.     

Genetic diversity and population differentiation of chestnut blight fungus, Cryphonectria parasitica, in China as revealed by RAPD

Seventeen Cryphonectria parasitica populations sampled from six regions in China were investigated using RAPD. Across all 169 isolates from the 17 populations evaluated, 52 of the 71 markers (73%) were polymorphic, total genetic diversity (h) was 0.1463, and Shannon’s index was 0.2312. Diversity within populations accounted for 74% of total genetic diversity, and genetic differentiation among populations was 0.26 (G _ST = 0.26). Gene flow was 1.4 among the populations; higher gene flow was found among populations within regions and among regions [N _m (G _SR) = 2.8 and N _m (G _RT) = 3.5]. The unweighted pair group mean analysis (UPGMA) dendrogram revealed two distinct clusters: the northern China group and the southern China group. The spatial autocorrelation analysis revealed that the variation at most loci was randomly distributed and lacked spatial structure, but several loci and closer distances were spatially structured. Human activity and habitat could also be important factors affecting genetic structure among C. parasitica populations in China. Genetic diversity was highest in Southwest China, descending in an orderly fashion to Northeast China. This pattern indicated that Southwest China might be the center of origin of C. parasitica in China. The present study provides useful information for understanding the origin and spread of chestnut blight fungus in China and valuable data for formulating relevant strategies for controlling the disease in China.     

Characterization of Esterases in a Brazilian Population of Zaprionus Indianus (Diptera: Drosophilidae)

The aim of this study was to characterize esterases in Zaprionus indianus, a drosophilid recently introduced into Brazil. A further aim was study the variation of activity of esterases in the presence of inhibitors and their expression according to sex, sexual activity and age of individual flies. Polymorphisms were detected in two esterase loci (Est-2 and Est-3) and monomorphisms in four others (Est-1, Est-4, Est-5 and Est-6). Biochemical tests using α- and β-naphthyl acetate and the inhibitors malathion, eserine sulphate and PMSF allowed us to classify EST-2 and EST-5 as β-esterases, both carboxyl-esterases, and EST-1, EST-3, EST-4 and EST-6 as α-esterases. EST-1 and EST-3 were classified as carboxyl-esterases and EST-4 and EST-6 as cholinesterases. EST-5 activity was more pronounced in males and EST-2 was restricted to them or to recently copulated females. EST-4, rarely detected, was not characterized. Based on their biochemical characteristics possible roles for these enzymes are suggested.     

The genus Synchaeta (rotifers) in a north-western Mediterranean coastal lagoon (Etang de Thau, France): taxonomical and ecological remarks

During a survey of a north-western Mediterranean coastal lagoon, (the Etang de Thau, and at a nearby marine station, 1994–1998), six species of the genus Synchaetawere identified. The systematics of this illoricate genus is difficult and identification is virtually impossible in preserved material, although some indication may be obtained from an examination of the trophi after treatment with sodium hypochlorite. In this study, taxonomic characters (mastax, body morphology and egg size) were obtained from living material prior to preservation. We add some ecological observations: distribution of species (neither temperature nor salinity were found to be determining factors), co-existence (up to five species can co-occur) and consideration of trophic links (competition with tintinnids, copepod nauplii and cirripedes).     

Expression of a chimeric GUS gene construct as a tool to study nodule morphogenesis in chicory leaves

Leaves from micropropagated chicory plantlets were cultivated in vitro to regenerate organogenic nodules. The nodules were transformed with a 2.3 kb fragment of an apple calmodulin promoter region fused to the coding sequence of uidA reporter gene. Histochemical detection of β-glucuronidase expression in transgenic regenerants showed that vessel-associated cells were strongly stained. Previous histological investigations have shown that the differentiation of vascular elements is essential to nodule and bud-derived-nodule development. Therefore, β-glucuronidase activity was tested in a single transgenic chicory line during nodule morphogenesis and bud regeneration. The vascular connections between leaves and nodules, then between nodules and buds were stained blue, indicating an alternative system for determining the histological origin of nodules and adventitious buds from chicory leaf explants. This revised version was published online in June 2006 with corrections to the Cover Date.     

Species diversity,ecology and evolution in a primitive Angiosperm genus:Hibbertia (Dilleniaceae)

Among the approximately 130 species ofHibbertia found in Australia, there are tall shrubs, low or trailing shrubs and vines bearing a diversity of leaves as to shape and venation pattern. Flowers are solitary, in leafy cymes or in false spikes, and display various gradual and abrupt transitions from vegetative to reproductive appendages. In the androecium, stamen number is highly variable both between and within species. Some sections have radial symmetry, others bilateral symmetry of the androecium and gynoecium. Follicle number varies from 10 to 1. Basic chromosome numbers of n = 4, 5, 8, 9, 10, 12 and 13 have been found in various sections, and occasional higher numbers, up to n = 64, indicate the presence of polyploidy. Habitats vary from tropical savanna through rain forest margins, wet and dry sclerophyll forests, heaths, sphagnum swamps, and mallee scrub to desert margins. The principal center of diversity is southwestern Australia, less diverse centers are in southeastern and northern Australia. With respect to leaf size, structure and venation; floral symmetry; and chromosome numbers; the diversity found among the species ofHibbertia exceeds that found in all but a few genera of Angiosperms, and is greater than that in any other exclusively woody genus. Nevertheless, individual species are relatively constant with respect to both morphology and ecological preferences.Presented at the symposium Speciation and the Species Concept during the XIIth International Botanical Congress, Leningrad, July 8, 1975.     

Genetic diversity and population structure in Malus sieversii, a wild progenitor species of domesticated apple

Malus sieversii (Lebed.) M. Roem. is a wild progenitor species of the domesticated apple. It is found across a mountainous region of central Asia and has been the focus of several collection expeditions by the USDA-ARS-National Plant Germplasm System. This study used microsatellite variation at seven loci to estimate diversity and differentiation within M. sieversii using several complimentary approaches. Multilocus genotypes were amplified from 949 individuals representing seedling trees from 88 half-sib families from eight M. sieversii populations collected in Kazakhstan. Apportioning of genetic variation was estimated at both the family and site level. Analyses using a hierarchical model to estimate F _st showed that differentiation among individual families is more than three times greater than differentiation among sites. In addition, average gene diversity and allelic richness varied significantly among sites. A rendering of a genetic network among all sites showed that differentiation is largely congruent with geographical location. In addition, nonhierarchical Bayesian assignment methods were used to infer genetic clusters across the collection area. We detected four genetic clusters in the data set. The quality of these assignments was evaluated over multiple Markov Chain Monte Carlo runs using both posterior likelihood and stability of the assignments. The spatial pattern of genetic assignments among the eight collection sites shows two broadly distributed and two narrowly distributed clusters. These data indicate that the southwestern collection sites are more admixed and more diverse than the northern sites.