Biotelemetry of crustacean decapods: sampling design,statistical analysis,and interpretation of data

Lotic systems in many regions of the country have experienced habitat degradation and biodiversity loss due to agricultural activity and urbanization. Southeastern Michigan is no exception, as agriculture in the River Raisin watershed and increased urbanization in the Huron River watershed threatens both systems. To further understand the ecological impact of land use on trophic interactions in Midwestern streams and assess the use of a selected set of weighted, quantitative food web metrics as a tool for investigating the influence of anthropogenic disturbance on these systems we compared summer food webs for nine second-order streams. All streams were categorized as developed, undeveloped, or agricultural based on land cover data. Developed and undeveloped streams were located in the Huron River watershed and agricultural streams were located in the River Raisin watershed. Reach-level habitat quality was also assessed at each study site using the EPA’s Rapid Habitat Assessment. Fish diets (n = 410) were analyzed to create summer food webs for each site. Comparisons of food webs were made using a suite of weighted, quantitative metrics to identify differences in fish–macroinvertebrate interactions across streams with differing land cover at the sub-basin scale and habitat quality at the local scale. Although undeveloped streams had higher species richness and less habitat degradation, no significant patterns were observed in the quantitative metrics across the three stream categories or based on reach-level habitat conditions. Decapoda, terrestrial Hymenoptera, and Chironomidae were the primary prey taxa in all stream categories. Decapods accounted for the majority of biomass consumed and the pattern of this consumption strongly influenced metric scores. The suite of quantitative metrics tested in this study did not detect significant differences in fish–macroinvertebrate food webs across land use categories, likely in part due to the dominance of a large, tolerant prey taxa in fish diets, regardless of land use and local habitat quality.     

Effects of agriculture on wood breakdown and microbial biofilm respiration in southern Appalachian streams

1. Agriculture causes high sediment, nutrient and light input to streams, which may affect rates of ecosystem processes, such as organic matter decay. In the southern Appalachians, socioeconomic trends over the past 50 years have caused widespread abandonment of farmland with subsequent reforestation. Physical and chemical properties of streams in these reforested areas may be returning to pre‐agriculture levels thereby creating the potential for recovery of ecosystem processes. 2. We examined wood breakdown and microbial activity on wood substrata in streams with different historical and current agricultural activity in their catchments. We analysed historical (1950) and recent (1998) forested land cover from large areas of the southern Appalachians and categorized streams based on percent forested land cover in these two time periods. Categories included a gradient of current agriculture from forested to heavily agricultural and reforestation from agriculture due to land abandonment. We compared microbial respiration on wood veneer substrata and breakdown of wood veneers among these land‐use categories. We also compared temperature, sediment accumulation and nitrogen and phosphorus concentrations. 3. Streams with current agriculture had higher concentrations of dissolved inorganic nitrogen than forested streams. Despite reforestation from agriculture, nitrogen concentrations were also elevated in streams with agricultural histories relative to forested streams. Temperature was also higher in agricultural streams but appeared to recover from historical agriculture through reforestation and stream shading. 4. Wood breakdown rates ranged from 0.0015 to 0.0076 day^?1 and were similar to other studies using wood veneers to determine breakdown rate. Microbial respiration increased with incubation time in streams up to approximately 150 days, after which it remained constant. Neither wood breakdown nor microbial respiration was significantly different among land‐use categories, despite the observed physical and chemical differences in streams based on land‐use. Wood breakdown rates could be predicted by microbial respiration indicating microbial control of wood breakdown in these streams. Both breakdown and microbial respiration were negatively correlated with the amount of inorganic sediment accumulated on wood veneers. 5. Higher nutrients and temperature led us to expect faster breakdown and higher microbial respiration in agricultural streams, but sediment in these streams may be limiting microbial activity and breakdown of organic material resulting in little net effect of agriculture on wood breakdown. Wood may not be desirable as a tool for functional assessment of stream integrity due to its unpredictable response to agriculture.     

Scale-dependent effects of rural activities on benthic macroinvertebrates and physico-chemical characteristics in headwater streams of the Mara River,Kenya

We studied streams in a rural landscape mosaic of the upper Mara River basin (Mau Forest, Kenya), where native forest has been converted to land uses dominated by various kinds of farming, agriculture and rural human settlements. We investigated scale-dependent effects of these anthropogenic rural activities on macroinvertebrates and physico-chemical variables by separately testing for effects of reach-scale disturbance and catchment-scale land use. Physico-chemical variables like conductivity, turbidity and total suspended solids reacted equally well to reach-scale disturbance and catchment-scale land use, demonstrating the high spatial integration potential of these variables and calling for farsighted large-scale water resource management. In contrast, macroinvertebrates reacted more sensitively at the reach-scale than at the catchment-scale, suggesting a stronger influence of local habitat conditions. These results highlight the importance of local stream ecosystem management, e.g., the restoration and protection of stream banks, to protect against agriculture-driven biodiversity losses. However, we also found responses of selected taxa to catchment-scale land use, suggesting that localized management efforts may not suffice to maintain full stream ecosystem integrity and regional biodiversity. Our results also suggest that macroinvertebrates may allow a scale-specific assessment of stream ecosystem integrity and pressures by a scale-dependent bioindicatory approach.     

Status assessment in acid-sensitive and non-acid-sensitive Maryland coastal planin streams using an integrated biological,chemical, physical,and land-use approach

This study was designed to: (1) evaluate the ecological status of acid-sensitive and non acid-sensitive Maryland coastal plain streams using biological (Index of biotic Integrity [IBI] for fish), chemical and physical habitat conditions; (2) determine if a low IBI for coastal plain stream fish can be related to stream sensitivity from acidic inputs and (3) correlate land use activities and watershed size in the coastal plain streams with biological, chemical and physical conditions. IBI values obtained using 12 community metrics for Maryland coastal plain stream fish demonstrated that there were no significant differences in these values when acid-sensitive and non-acid-sensitive streams were compared. However, other complementary data in acid-sensitive streams such as absence of the acid-sensitive species, blacknose dace and higher numbers and biomass of tolerant species suggested that these streams may be impacted. IBI values were also found to be negatively correlated with various trace metals in acid-sensitive streams but not in non-acid-sensitive areas. Chemical conditions such as trace metals and nutrients were associated with land use activities. Highest concentrations of trace metals (chromium, nickel, and cadmium) were found in streams with the highest percentage of low residential housing. Nitrate concentrations were significantly higher in streams found in agricultural areas than in forested areas. Agriculturally dominated streams with highest nitrate concentrations (> 10 mg l^-1) also contained the highest percentage of livestock feeding operations. The mean IBI score for streams draining agricultural land was higher than the mean value for forested streams when all streams were compared. However, when several streams that were only marginally forested (< 50%) were removed from the analysis, the IBI scores did not differ significantly by land use. Two physical habitat indices exhibited a strong associated with each other. Each habitat index also correlated with IBI values.     

Stream macroinvertebrate response to catchment urbanisation (Georgia, U.S.A.)

SUMMARY 1. The effects of catchment urbanisation on water quality were examined for 30 streams (stratified into 15, 50 and 100 km² ± 25% catchments) in the Etowah River basin, Georgia, U.S.A. We examined relationships between land cover (implying cover and use) in these catchments (e.g. urban, forest and agriculture) and macroinvertebrate assemblage attributes using several previously published indices to summarise macroinvertebrate response. Based on a priori predictions as to mechanisms of biotic impairment under changing land cover, additional measurements were made to assess geomorphology, hydrology and chemistry in each stream. 2. We found strong relationships between catchment land cover and stream biota. Taxon richness and other biotic indices that reflected good water quality were negatively related to urban land cover and positively related to forest land cover. Urban land cover alone explained 29–38% of the variation in some macroinvertebrate indices. Reduced water quality was detectable at c. >15% urban land cover. 3. Urban land cover correlated with a number of geomorphic variables such as stream bed sediment size (–) and total suspended solids (+) as well as a number of water chemistry variables including nitrogen and phosphorus concentrations (+), specific conductance (+) and turbidity (+). Biotic indices were better predicted by these reach scale variables than single, catchment scale land cover variables. Multiple regression models explained 69% of variation in total taxon richness and 78% of the variation in the Invertebrate Community Index (ICI) using phi variability, specific conductance and depth, and riffle phi, specific conductance and phi variability, respectively. 4. Indirect ordination analysis was used to describe assemblage and functional group changes among sites and corroborate which environmental variables were most important in driving differences in macroinvertebrate assemblages. The first axis in a non‐metric multidimensional scaling ordination was highly related to environmental variables (slope, specific conductance, phi variability; adj. R²=0.83) that were also important in our multiple regression models. 5. Catchment urbanisation resulted in less diverse and more tolerant stream macroinvertebrate assemblages via increased sediment transport, reduced stream bed sediment size and increased solutes. The biotic indices that were most sensitive to environmental variation were taxon richness, EPT richness and the ICI. Our results were largely consistent over the range in basin size we tested.     

Effects of land use on water quality and aquatic biota of three North Carolina Piedmont streams

Three streams in the Piedmont ecoregion of North Carolina were studied to evaluate the effect of land use (forested, agricultural, urban) on water quality and aquatic biota. In comparison with the forested stream, there were few changes in water quality at the agricultural and urban streams. Suspended-sediment yield was greatest for the urban catchment and least at the forested catchment. Suspended-sediment concentrations during storm events followed this same pattern, but at low-moderate flows suspended-sediment concentrations were greatest at the agricultural site. Most nutrient concentrations were highest at the agricultural site, and the amount of available dissolved nitrogen was elevated at both the urban and agricultural sites. High concentrations of metals (totals) in the water column were sometimes observed at all sites, but maximum average concentrations were recorded at the urban site (especially Cr, Cu, and Pb). Maximum sediment metal concentrations, however, were not found at the urban site, but were usually recorded at the forested site. Only minor differences were noted between fish communities of the forested and agricultural sites, although both abundance and average size of some species increased at the agricultural site. The fish community at the urban site was characterized by low species richness, low biomass, and the absence of intolerant species.Invertebrate taxa richness, a biotic index, and the number of unique invertebrate species (found at only one site) indicated moderate stress (Fair water quality) at the agricultural site and severe stress (Poor water quality) at the urban site. At the agricultural site, declines in taxa richness within intolerant groups were partially offset by increases within tolerant groups. The agricultural stream had the highest abundance values, indicating enrichment. The urban site, however, was characterized by low species richness for most groups and very low abundance values. Analysis of seasonal patterns suggested detritus was the most important food source for invertebrates in the forested stream, while periphyton was of greater importance in the agricultural stream. Dominant macroinvertebrate groups shifted from Ephemeroptera at the forested site, to Chironomidae at the agricultural site, and Oligochaeta at the urban site. There was little between-site overlap in dominant species (8–7%), indicating that land use strongly influenced the invertebrate community. Chemical and physical parameters measured at the three sites did not seem sufficient to account for all of the observed differences in the invertebrate communities, suggesting some unmeasured toxicity. Biological measurements, especially macroinvertebrates community structure, consistently indicated strong between-site differences in water and habitat quality.     

Soil erosion and gully growth associated with cultivation in southwestern Hokkaido, Japan

This study examined the processes underlying land and riparian degradation, by quantifying soil erosion and gully growth in slopes adjacent to cropland. The concentration of suspended sediments was consistently higher in cultivated catchments, where gully expansion causes 2–3 times more landslides than occur in forested catchments. Sediment from gullies contributed about 34% of the total sediment in the cultivated catchment. There has been increasing erosion and sedimentation on the valley floor over the past 20 years, both because of the expansion of land under cultivation and because of the mechanization of agriculture since the 1960s has reduced the infiltration capacity of cropland, making it easier for erosion to occur when it rains. Most of the finer sediment is transported to the sea, where it affects coastal ecosystems, while the coarser sediment, such as sand, remains in the stream and fills the spaces between gravel on the streambed. This eliminates habitat suitable for fish and invertebrates; the density of macro-invertebrates in cultivated catchments is only 10–20% of that in forested catchments. Effective stream restoration will require both construction measures to prevent slopes from eroding and the regulation of land use, including reforestation at the borders of agricultural land.     

Revealing the pathways by which agricultural land‐use affects stream fish communities in South Brazilian grasslands

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Changes in biota along a dry-land river in northwestern Zimbabwe: declines and improvements in river health related to land use

Macroinvertebrates were sampled from 15 sites along a dry-land river in northwestern Zimbabwe to assess biotic responses to land use changes along the course of the river. The headwater sites were protected by a riparian corridor of native forest, but this was replaced by intensive subsistence agriculture in the mid-reaches while the lower reaches were located within a protected wildlife area with diverse and wide riparian forests. Canonical correspondence analysis indicated that intensive agricultural activities within the mid-reaches caused severe degradation of the stream physical habitat through increased fine sediment deposition. This coincided with a significant decline in macroinvertebrate richness, diversity, and abundance at the agriculturally impacted mid-reach sites. The presence of wide riparian zones at the lower river sites resulted in significant improvements in stream physical habitat quality, and this was paralleled by significant recovery or reappearance of taxa that had disappeared from the mid-reaches. We suggest that restoration of the riparian vegetation within the mid-reaches of the Nyaodza River would lead to improved physical habitat and biotic health of this dry-land river.     

Catchment land cover as a proxy for macroinvertebrate assemblage structure in Carpathian Mountain streams

We compared land cover, riparian vegetation, and instream habitat characteristics with stream macroinvertebrate assemblages in 25 catchments in the Carpathian Mountains in Central Europe. This study area was particularly selected because of its diverse history of forest and agricultural ecosystems linked to geopolitical dynamic, which provide a suite of unique landscape scale, land cover settings in one ecoregion. Canonical Correspondence Analysis (CCA) showed that variation in composition and structure of macroinvertebrate assemblages was primarily related to four land cover types, and not to riparian or instream habitat. These were the portions in the catchment areas of (1) broadleaved forest, (2) fine-grained agricultural landscape mosaic with scattered trees (e.g., pre-industrial cultural landscape), (3) mixed forest, and (4) natural grassland without trees. Principal Component Analysis (PCA) suggested that land cover types and stream channel substrates co-varied. The PCA also showed that chemical variables, including organic carbon, had higher values in the agricultural landscape compared to natural forests. The major source of variation among taxa in streams was higher abundance of Diptera in agricultural landscapes and of Plecoptera, Coleoptera, Trichoptera, and Amphipoda in forests. Gastropoda and Oligochaeta were more abundant in open, fine-grained agricultural landscape mosaics with scattered trees. Ephemeroptera taxa were quite indifferent to these gradients in catchment land cover, but showed a tendency of being more abundant in the pre-industrial cultural landscape. Our findings suggest that land cover can be used as a proxy of the composition and structure of macroinvertebrate assemblages. This means that land use management at the catchment scale is needed for efficient conservation and recovery of stream invertebrate communities.     

Habitat filtering and adult dispersal determine the taxonomic composition of stream insects in an urbanizing landscape

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Effects of pasture conversion to sugarcane for biofuel production on stream fish assemblages in tropical agroecosystems

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Leaf breakdown in streams differing in catchment land use

1. The impact of changes in land use on stream ecosystem function is poorly understood. We studied leaf breakdown, a fundamental process of stream ecosystems, in streams that represent a range of catchment land use in the Piedmont physiographic province of the south‐eastern United States. 2. We placed bags of chalk maple (Acer barbatum) leaves in similar‐sized streams in 12 catchments of differing dominant land use: four forested, three agricultural, two suburban and three urban catchments. We measured leaf mass, invertebrate abundance and fungal biomass in leaf bags over time. 3. Leaves decayed significantly faster in agricultural (0.0465 day^?1) and urban (0.0474 day^?1) streams than in suburban (0.0173 day^?1) and forested (0.0100 day^?1) streams. Additionally, breakdown rates in the agricultural and urban streams were among the fastest reported for deciduous leaves in any stream. Nutrient concentrations in agricultural streams were significantly higher than in any other land‐use type. Fungal biomass associated with leaves was significantly lower in urban streams; while shredder abundance in leaf bags was significantly higher in forested and agricultural streams than in suburban and urban streams. Storm runoff was significantly higher in urban and suburban catchments that had higher impervious surface cover than forested or agricultural catchments. 4. We propose that processes accelerating leaf breakdown in agricultural and urban streams were not the same: faster breakdown in agricultural streams was due to increased biological activity as a result of nutrient enrichment, whereas faster breakdown in urban streams was a result of physical fragmentation resulting from higher storm runoff.     

Relationships between land use, spatial scale and stream macroinvertebrate communities

1. The structure of lotic macroinvertebrate communities may be strongly influenced by land‐use practices within catchments. However, the relative magnitude of influence on the benthos may depend upon the spatial arrangement of different land uses in the catchment. 2. We examined the influence of land‐cover patterns on in‐stream physico‐chemical features and macroinvertebrate assemblages in nine southern Appalachian headwater basins characterized by a mixture of land‐use practices. Using a geographical information system (GIS)/remote sensing approach, we quantified land‐cover at five spatial scales; the entire catchment, the riparian corridor, and three riparian ‘sub‐corridors’ extending 200, 1000 and 2000 m upstream of sampling reaches. 3. Stream water chemistry was generally related to features at the catchment scale. Conversely, stream temperature and substratum characteristics were strongly influenced by land‐cover patterns at the riparian corridor and sub‐corridor scales. 4. Macroinvertebrate assemblage structure was quantified using the slope of rank‐abundance plots, and further described using diversity and evenness indices. Taxon richness ranged from 24 to 54 among sites, and the analysis of rank‐abundance curves defined three distinct groups with high, medium and low diversity. In general, other macroinvertebrate indices were in accord with rank‐abundance groups, with richness and evenness decreasing among sites with maximum stream temperature. 5. Macroinvertebrate indices were most closely related to land‐cover patterns evaluated at the 200 m sub‐corridor scale, suggesting that local, streamside development effectively alters assemblage structure. 6. Results suggest that differences in macroinvertebrate assemblage structure can be explained by land‐cover patterns when appropriate spatial scales are employed. In addition, the influence of riparian forest patches on in‐stream habitat features (e.g. the thermal regime) may be critical to the distribution of many taxa in headwater streams draining catchments with mixed land‐use practices.     

In‐stream habitat and macroinvertebrate responses to riparian corridor length in rangeland streams

Conservation and restoration of riparian vegetation in agricultural landscapes has had mixed success at protecting in‐stream habitat, potentially due to the mismatch between watershed‐scale impacts and reach‐scale restoration. Prioritizing contiguous placement of small‐scale restoration interventions may effectively create larger‐scale restoration projects and improve ecological outcomes. We performed a multi‐site field study to evaluate whether greater linear length of narrow riparian tree corridors resulted in measurable benefits to in‐stream condition. We collected data at 41 sites with varying upstream tree cover nested within 13 groups in rangeland streams in coastal northern California, United States. We evaluated the effect of riparian tree corridor length on benthic macroinvertebrate communities, as well as food resources, water temperature, and substrate size. Sites with longer riparian corridors had higher percentages of invertebrates sensitive to disturbance (including clingers and EPT taxa) as well as lower water temperatures and less fine sediment, two of the most important aquatic stressors. Despite marked improvement, we found no evidence that macroinvertebrate communities fully recovered, suggesting that land use continued to constrain conditions. The restoration of long riparian corridors may be an economically viable and rapidly implementable technique to improve habitat, control sediment, and counter increasing water temperatures expected with climate change within the context of ongoing land use.     

Effects of land cover on sediment regime and fish assemblage structure in four southern Appalachian streams

SUMMARY 1. We examined the relationship between catchment land cover, sediment regime and fish assemblage structure in four small streams in the upper Little Tennessee River basin of North Carolina. Study streams drained similar sized catchments (17–31 km²) with different fractions of non-forested land cover. Non-forested land cover was <3% in two 'reference' streams, whereas it was 13 and 22% in two 'disturbed' streams. Land cover data were compared with sediment transport data (suspended and bedload), benthic habitat data (embeddedness, substratum composition and coverage of fines) and fishes collected in autumn 1997.
2. Suspended sediment concentration was significantly higher in disturbed streams during both baseflow and stormflow. During baseflow disturbed streams nearly always exceeded 10 nephelometric turbidity units (NTU), whereas reference streams never exceeded this threshold. The difference in suspended sediment concentration between reference and disturbed streams was more consistent at baseflow than at stormflow. Therefore, baseflow turbidity may be a useful indicator of potential stream degradation.
3. Disturbed sites had five- to nine-fold more bedload transport than reference sites. Both embeddedness and streambed instability increased with increasing non-forested land cover.
4. Relative abundance of fishes requiring clean cobble/gravel substratum for spawning was lower in disturbed streams, whereas relative abundance of mound-building cyprinids, their nest associates and fishes that excavate nests in soft sediments (centrarchids) was higher. Relative abundance of fishes spawning in benthic crevices and gravel (BC + G) declined as the proportion of non-forested land cover increased. This study supports growing evidence that human-induced sedimentation alters stream fish assemblages.     

Strong land‐use effects on the dispersal patterns of adult stream insects: implications for transfers of aquatic subsidies to terrestrial consumers

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Importance of scale,land‐use,and stream network properties for riparian plant communities along an urban gradient

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Quantifying relationships between land‐use gradients and structural and functional indicators of stream ecological integrity

1. Modification of natural landscapes and land‐use intensification are global phenomena that can result in a range of differing pressures on lotic ecosystems. We analysed national‐scale databases to quantify the relationship between three land uses (indigenous vegetation, urbanisation and agriculture) and indicators of stream ecological integrity. Boosted regression tree modelling was used to test the response of 14 indicators belonging to four groups – water quality (at 578 sites), benthic invertebrates (at 2666 sites), fish (at 6858 sites) and ecosystem processes (at 156 sites). Our aims were to characterise the ecological response curves of selected functional and structural metrics in relation to three land uses, examine the environmental moderators of these relationships and quantify the relative utility of metrics as indicators of stream ecological integrity. 2. The strongest indicators of land‐use effects were nitrate + nitrite, delta‐15 nitrogen value (δ¹⁵N) of primary consumers and the Macroinvertebrate Community Index (a biotic index of organic pollution), while the weakest overall indicators were gross primary productivity, benthic invertebrate richness and fish richness. All indicators declined in response to removal of indigenous vegetation and urbanisation, while variable responses to agricultural intensity were observed for some indicators. 3. The response curves for several indicators suggested distinct thresholds in response to urbanisation and agriculture, specifically at 10% impervious cover and at 0.1 g m^?3 nitrogen concentration, respectively. 4. Water quality and ecosystem process indicators were influenced by a combination of temperature, slope and flow variables, whereas for macroinvertebrate indicators, catchment rainfall, segment slope and temperature were significant environmental predictor variables. Downstream variables (e.g. distance to the coast) were significant in explaining residual variation in fish indicators, not surprisingly given the preponderance of diadromous fish species in New Zealand waterways. The inclusion of continuous environmental variables used to develop a stream typology improved model performance more than the inclusion of stream type alone. 5. Our results reaffirm the importance of accounting for underlying spatial variation in the environment when quantifying relationships between land use and the ecological integrity of streams. Of distinctive interest, however, were the contrasting and complementary responses of different indicators of stream integrity to land use, suggesting that multiple indicators are required to identify land‐use impact thresholds, develop environmental standards and assign ecological scores for reporting purposes.