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1.
F. Terlizzi C. Li C. Ratti W. Qiu R. Credi B. Meng 《The Annals of applied biology》2011,159(3):478-490
Grapevine rupestris stem pitting‐associated virus (GRSPaV) is a member of the genus Foveavirus within the new family Betaflexiviridae. GRSPaV is distributed among grapevines worldwide and is implicated in the disease rupestris stem pitting (RSP) of the rugose wood complex and two other disorders. GRSPaV is composed of a wide range of sequence variants, and so far, the complete genomes of five sequence variants have been sequenced. Quick and reliable detection of different GRSPaV variants is a critical step in the elimination and control of GRSPaV. Previously, primers designed from various genomic regions have been used in RT‐PCR for the detection of GRSPaV variants. The efficiency of RT‐PCR varied widely depending on the spectrum of the primers that were used. In this study, we designed a pair of degenerate primers based on the consensus sequence of the genomic region encoding the highly conserved RNA‐dependent RNA polymerase domain from five reference isolates of GRSPaV for which the genome sequence are available. We demonstrate that this set of primers is comparable, if not superior, to the broad‐spectrum primers RSP13&14 in detecting multiple GRSPaV variants. Using these degenerate primers, we identified two new and distinct sequence variants. The 3′ terminal genomic region of one of the new variants, GRSPaV‐ML, spanning the 3′ part of ORF1, through the entire open reading frames 2–4, and the 5′ region of ORF5 were sequenced. Sequence comparison demonstrates that GRSPaV‐ML is distinct from each of the five reference isolates. 相似文献
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Christov I. K. Stefanov D. Goltsev V. N. Abrasheva P. 《Russian Journal of Plant Physiology》2001,48(4):473-477
The effects of viral diseases on the photosynthetic activity of grapevine (Vitis rupestrisvar. Rupestris du Lot) leaves were investigated. The third and sixth leaves used for measurements were obtained from in vitrogrown healthy plants and plants affected by grapevine fanleaf and rupestris stem pitting viruses. The induction curves of prompt and delayed chlorophyll fluorescence, as well as the temperature characteristics of steady-state, prompt, and delayed emissions, were investigated. Age-dependent changes were found, which were related, on the one hand, to the acceleration of electron transport and the enhancement of thylakoid energization and, on the other hand, to a smaller extent of transmembrane H+in the younger sixth leaf compared to that in the third leaf. The infected plants characteristically showed faster electron transport, an elevated energetic efficiency of photosynthesis, and the suppression of CO2fixation owing to a presumable activation of the adenylate metabolism. An analysis of the thermograms of prompt and delayed fluorescence revealed the shifts in the position of the M
1peak and a half-inhibition temperature T50towards a higher temperature in infected plants, which indicates a certain increase in the thermal tolerance of thylakoid membranes. The data suggest that the viral metabolism affects the functional activity and stability of thylakoid membranes. 相似文献
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Hamid Mohammadi Sandra Alaniz Zia Banihashemi Josep Armengol 《Journal of Phytopathology》2009,157(10):642-645
Eight Cylindrocarpon isolates recovered from the trunk bases of 10-year-old grapevines showing decline symptoms from two vineyards in Bavanat (Fars province, south-western Iran) were studied. Based on phenotypical characteristics, mating experiments and molecular data, they were identified as Cylindrocarpon liriodendri. Pathogenicity was confirmed with selected isolates inoculated into 8-month-old dormant rooted cuttings of grapevine rootstock cv. 110 Richter. This is the first report of C. liriodendri causing black foot disease of grapevines in Iran. 相似文献
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Levels of 4-hydroxystilbene-oxidizing isoperoxidases related to constitutive disease resistance in in vitro-cultured grapevine 总被引:1,自引:0,他引:1
Antonio A. Calderón José M. Zapata María A. Pedreño Romualdo Muñoz Alfonso Ros Barceló 《Plant Cell, Tissue and Organ Culture》1992,29(2):63-70
A zymographic screening of peroxidases (EC 1.11.1.7) capable of oxidizing 4-hydroxystilbene was carried out by means of the peroxidase-catalyzed oxidative coupling of 4-hydroxystilbene and 4-aminoantipyrine. This screening reveals that only a few isoperoxidases are active in oxidizing 4-hydroxystilbene to viniferin-type compounds in in vitro cultures of grapevine. Unlike total peroxidase activity measured with 4-methoxy--naphthol, the levels of total peroxidase activity measured using 4-hydroxystilbene are related to disease resistance against downy mildew in axillary bud cultures of Vitis vinifera and (Vitis vinifera x Vitis rupestris) x Vitis riparia. From this observation, and using the above zymographic assay, it was found that a 4-hydroxystilbene-oxidizing isoperoxidase was overexpressed in both leaves and stems of the hybrid in relation to the increase in disease resistance of this species. These results suggest that constitutive 4-hydroxystilbene-oxidizing isoperoxidases may participate through their role in viniferin synthesis in the constitutive resistance mechanism that grapevines show against downy mildew.Abbreviations 4-AAP
4-aminoantipyrine
- HRP
horseradish peroxidase
- 4-HS
hydroxystilbene
- HSPrx
4-hydroxystilbene-oxidizing peroxidase
- 4-MN
4-methoxy--naphthol 相似文献
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Interactions between protein molecules and the virus removal membrane surface: Effects of immunoglobulin G adsorption and conformational changes on filter performance
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Ryo Hamamoto Hidemi Ito Makoto Hirohara Ryongsok Chang Tomoko Hongo‐Hirasaki Tomohiro Hayashi 《Biotechnology progress》2018,34(2):379-386
Membrane fouling commonly occurs in all filter types during virus filtration in protein‐based biopharmaceutical manufacturing. Mechanisms of decline in virus filter performance due to membrane fouling were investigated using a cellulose‐based virus filter as a model membrane. Filter performance was critically dependent on solution conditions; specifically, ionic strength. To understand the interaction between immunoglobulin G (IgG) and cellulose, sensors coated with cellulose were fabricated for surface plasmon resonance and quartz crystal microbalance with energy dissipation measurements. The primary cause of flux decline appeared to be irreversible IgG adsorption on the surface of the virus filter membrane. In particular, post‐adsorption conformational changes in the IgG molecules promoted further irreversible IgG adsorption, a finding that could not be adequately explained by DLVO theory. Analyses of adsorption and desorption and conformational changes in IgG molecules on cellulose surfaces mimicking cellulose‐based virus removal membranes provide an effective approach for identifying ways of optimizing solution conditions to maximize virus filter performance. © 2017 American Institute of Chemical Engineers Biotechnol. Prog., 34:379–386, 2018 相似文献
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An asparagus field trial was established with clonal plants to determine the long-term effects of asparagus virus 2 (AV2) infection on spear production. Yield data, analysed by ANOVA, showed that AV2 infection caused significant (P < 0.05) decreases in spear yield which became more pronounced as the trial progressed. Mean marketable spear yields were reduced by 14%, 28%, 20%, 48% and 57% and reject spear yields were increased by 93%, 105%, 207%, 352% and 167%, during harvest years 1–5 respectively. Marketable spear yields from AV2–free plants increased annually to yr 5, but for AV2–infected plants, yields increased to yr 3 and decreased annually thereafter. Spears from AV2–infected plants were thinner than those from AV2–free plants, resulting in more reject thin spears by 109%, 88%, 220%, 499% and 216% during harvest yr 1–5, respectively. Further, data collected in yr 4 and 5 showed that AV2 infection had caused a 31 % reduction in mean spear diameter and reductions of 27% and 22% respectively, in diameter and height of fern stalks. Clearly, plants with smaller fern stalks were less able to accumulate carbohydrate reserves and therefore produced fewer, smaller spears and fern stalks the following spring. This may result in annual cycles of diminishing productivity in which the size and number of spears and fern stalks decrease with each successive year. The type and timespan of symptoms caused by AV2 infection in this trial are similar to those reported for asparagus decline syndrome and therefore it is likely that AV2 infection is a factor contributing to asparagus decline. 相似文献
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Five new iridoids, namely rupesin A-E (1-5, resp.), together with six known iridoids, 6-11, were isolated from the roots of Patrinia rupestris. Their structures were elucidated by spectroscopic methods including IR, UV, MS, and 1D- and 2D-NMR experiments, and comparison with data of known analogues. Compounds 4 and 11, compounds 1, 2, 5, 6, 8, 9, and 10, and compounds 3, 4, and 8 showed significant antibacterial activities against Bacillus subtilis, Escherichia coli, and Staphylococcus aureus, respectively. 相似文献
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Development, histological process and Grapevine leafroll‐associated virus‐3 localisation were studied in micrografts of three scion/rootstock combinations: healthy/healthy, healthy/infected and infected/healthy. Earlier bud break and faster growth in scions of micrografts were obtained when the healthy shoot segments were used as scions, while earlier bud break in rootstocks and greater fresh weight of roots in micrografts were produced when the healthy shoot segments were used as rootstocks. All histological processes including callus initiation and formation in micrografting conjunctions, and initiation of new cambial cells followed by vascular bundle development connecting scions and rootstocks were similar in micrografts, regardless of the sanitary status of the scions and rootstocks used for micrografting. Virus infection in micrografting conjunctions and systematic infection in micrografts were much more efficient and faster in micrografting combination of the infected scions/healthy rootstocks than in the healthy scions/infected rootstocks. To the best of our knowledge, this is the first report addressing histological process of micrograft development and virus localisation in micrografts. In vitro culture system established in this study facilitates studies on the ‘pure’ impact of the viral infection on micrografting. 相似文献
11.
A field survey of populations of goldsinny wrasse ( Ctenolabms rupestris ) was undertaken on selected areas of rocky coast of west Scotland. Observations by sub-aqua diving were used to determine distribution, habitat preference, and population density, and their seasonal variations. Availability of the preferred refuge type (crevices on rock faces, or between boulders, where two or more entrances exist) was essential in determining goldsinny presence. Goldsinny were not always present in areas or at depths where the influences of freshwater runoff (low temperatures and salinities) were likely, even if the preferred habitat type was available. In areas remote from these influences, and where there were suitable refuges, depth of water (0–44 m), macroalgal cover and high current speeds (2.1–3.6 ms−1 ) did not affect goldsinny distribution. Observed densities of goldsinny reached a peak in summer months with a maximum of 4.0 m−2 in areas of shallow boulder scree, but only 1.0 m−2 in shallow areas with little scree, or at deeper study sites. Numbers of goldsinny observed actively swimming decreased after October, with a rapid disappearance in November. A gradual reappearance was recorded in late April, and early May. Changes in activity may be influenced by both water temperature and photoperiod. Young-of-the-year goldsinny were first observed in August in shallow water (0–8 m) areas typified by rock/boulder scree and/or high macroalgal cover. Where adults also inhabited these nursery areas, 0+ fish could make up over 50% of the total population. After their first winter, juvenile goldsinny may migrate away from inshore sites. 相似文献
12.
Peters MB Ovenden JR Broderick D Lance SL Hagen C Glenn TC 《Molecular ecology resources》2009,9(6):1467-1469
We developed and optimized 15 polymorphic microsatellite loci in the jungle perch, Kuhlia rupestris. Loci were screened in a single population (n = 24) from Fraser Island, Queensland, Australia. Number of alleles per locus ranged from 3 to 19 and observed heterozygosity from 0.25 to 1. No significant linkage disequilibrium was detected between any pair of loci. Genotype proportions for these loci in the population sampled were in Hardy–Weinberg equilibrium. 相似文献
13.
We developed polymerase chain reaction primers for eight dinucleotide microsatellite loci in the marine deep sea fish, roundnose grenadier (Coryphaenoides rupestris). All markers were obtained from a partial genomic DNA library, and characterized in 90 unrelated individuals from one putative population sampled on the Mid-Atlantic Ridge. The number of alleles ranged from two to 61 with an average of 21 per locus. The observed heterozygosity levels ranged from 0.301 to 0.987 with an average of 0.672. Several of the markers amplified multiple alleles from either the Atlantic cod (Gadus morhua) or the deep-sea fish roughhead grenadier (Macrourus berglax). 相似文献
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Shan-Hua Lü 《植物学报(英文版)》2007,49(3):343-350
Studies In model plants showed that SEPALLATA (SEP) genes are required for the Identification of floral organs and the determination of floral meristems In Arabidopsis. In this paper a SEP homolog, TrSEP3, was Isolated from a China-specific species, Taihangla rupestrisi Yü et LI. Phylogenetlc analysis showed that the gene belongs to the SEP3-clade of SEP (previous AGL2) subfamily. In situ hybridization was used to reveal the potential functional specification, and the results showed that TrSEP3 expression was first observed in floral meristems and then confined to the floral primordla of the three inner whorls. In the matured flower, TrSEP3 was strongly expressed In the tips of pistils and weak In stamens and petals. The evolution force analysis shows that TrSEP3 might undergo a relaxed negative selection. These results suggested that TrSEP3 may not only function In determining the identity of floral merlstems and the primordia of three inner whorls, but also function In matured reproductive organs. 相似文献
17.
冻地银莲花的化学成分 总被引:5,自引:1,他引:5
从冻地银莲花(Anemone Tupestris ssp.Gelida (Max.)Lauener)中分离鉴定了12个化合物.分别为常春藤配基(1).刺楸皂甙A(2),牡丹草皂甙B(3),白头翁皂甙D(4),常春藤皂甙B(5),刺楸皂甙B(6),hederacholichiside E(7),hederacholichiside F(8),槲皮素-7-O-α-L-鼠李糖甙(9)槲皮素-3-O-β-D-半乳糖-7-O-α-L-鼠李糖甙(10).胡萝卜甙(11)和β-谷甾醇(12).以上化合物在本植物中均为首次报道. 相似文献
18.
Scovia Adikini Settumba B. Mukasa Robert O. M. Mwanga Richard W. Gibson 《Journal of Phytopathology》2016,164(4):242-254
Sweet potato feathery mottle virus (SPFMV) and Sweet potato chlorotic stunt virus (SPCSV) are the most common viruses infecting sweetpotato in Uganda. Field plots planted with graft inoculated plants of virus‐free cultivars Beauregard, Dimbuka, Ejumula, Kabode and NASPOT 1 were used to assess the effect of SPFMV and SPCSV on yield and quality of sweetpotatoes in two agro‐ecologies. SPFMV spreads rapidly to control plots at Makerere University Agricultural Research Institute Kabanyolo (MUARIK), and these plots had similar yields to those singly infected with SPFMV but at the National Semi Arid Resource Research Institute (NaSARRI) where SPFMV spreads slowly, plots infected with SPFMV yielded 40% less than the control. Recovery from SPFMV appeared to be more frequent at NaSARRI than at MUARIK. Infection by SPCSV alone resulted in yield losses of 14–52%, while mixed infections of SPFMV+SPCSV resulted in yield losses in both locations of 60–95% depending on the cultivar. SPCSV and mixed infections of SPFMV+SPCSV also reduced the number of roots formed as well as the diameter of the roots, resulting in a greater length to diameter ratio compared to the healthy control. This study, therefore, confirms that both SPFMV and SPCSV, both singly and when mixed, can reduce yield, the extent depending on the cultivar. To mitigate the effect of these viruses, farmers should use clean planting materials of resistant varieties. 相似文献
19.
R. Montero H. El aou ouad D. Pacifico C. Marzachì N. Castillo E. García N.F. Del Saz I. Florez‐Sarasa J. Flexas J. Bota 《The Annals of applied biology》2017,171(2):155-171
Grapevine leafroll disease is one of the most important viral diseases of grapevine (Vitis vinifera) worldwide. Grapevine leafroll‐associated virus 3 (GLRaV‐3) is the most predominant virus species causing this disease. Therefore, it is important to identify GLRaV‐3 effects, especially in plants which do not systematically show visual symptoms. In this study, effects of GLRaV‐3 on grapevine physiology were evaluated in asymptomatic plants of Malvasía de Banyalbufar and Cabernet Sauvignon cvs. Absolute virus quantification was performed in order to determine the level of infection of the treatment. The net carbon dioxide (CO2) assimilation (AN) and electron transport rate (Jflux) were the main parameters affected by the virus. The AN reduction in infected plants was attributed to restrictions in CO2 diffusion caused by anatomical leaf changes and a reduction of Rubisco activity. Those effects were more evident in Malvasia de Banyalbufar plants. The reduction of AN leads to a decrease in the total oxygen uptake rate by the activity of the cytochrome oxidase pathway, producing slight differences in plant growth. Therefore, even though no symptoms were expressed in the plants, the effects of the virus compromised the plant vital processes, showing the importance of early detection of the virus in order to fight against the infection. 相似文献