The boundaries of river systems: the metazoan perspective

1. This overview of metazoans associated with the riparian/groundwater interface focuses on the fauna inhabiting substratum interstices within the stream bed and in alluvial aquifers beneath the floodplain. The objective is to integrate knowledge of habitat conditions and ecology of the interstitial fauna into a broad spatiotemporal perspective of lotic ecosystems. 2. Most aquatic metazoans of terrestrial ancestry, secondarily aquatic forms including insects and water mites (Hydracarina), are largely confined to surface waters (epigean), most of the time penetrating only the superficial interstices of the stream bed. 3. Primary aquatic metazoans include crustaceans and other groups whose entire evolutionary histories took place in water. Some species are epigean, whereas other members of the primary aquatic fauna are true subterranean forms (hypogean ) , residing deep within the stream bed and in alluvial aquifers some distance laterally from the channel. 4. The hypogean/epigean affinities of interstitial animals are reflected in repetitive gradients of species distribution patterns along vertical (depth within the stream bed), longitudinal (riffle/pool), and lateral (across the floodplain) spatial dimensions, as well as along recovery trajectories following floods (temporal dimension). 5. Fluvial dynamics and sediment characteristics interact to determine hydraulic conductivity, oxygen levels, pore space, particle size heterogeneity, organic content and other habitat conditions within the interstitial milieu. 6. Multidimensional environmental gradients occur at various scales across riparian/groundwater boundary zones. The spatiotemporal variability of hydrogeomorphological processes plays an important role in determining habitat heterogeneity, habitat stability, and connectivity between habitat patches, thereby structuring biodiversity patterns across the riverine landscape. 7. The erosive action of flooding maintains a diversity of hydrarch and riparian successional stages in alluvial floodplains. The patchy distribution patterns of interstitial communities at the floodplain scale reflect, in part, the spatial heterogeneity engendered by successional processes. 8. Interstitial metazoans engage in passive and active movements between surface waters and ground waters, between aquatic and riparian habitats, and between different habitat types within the lotic system. Some of these are extensive migrations that involve significant exchange of organic matter and energy between ecosystem compartments. 9. The generally high resilience of lotic ecosystems to disturbance is attributable, in part, to high spatiotemporal heterogeneity. Habitat patches less affected by a particular perturbation may serve as ’refugia ‘; from which survivors recolonize more severely affected areas. Mechanisms of refugium use may also occur within habitats, as, for example, through ontogenetic shifts in microhabitat use. Rigorous investigations of interstitial habitats as refugia should lead to a clearer understanding of the roles of disturbance and stochasticity in lotic ecosystems. 10. Development of realistic ’whole river ‘; food webs have been constrained by the exclusion of interstitial metazoans, which may in fact contribute the majority of energy flow in lotic ecosystems. A related problem is failure to include groundwater/riparian habitats as integral components of alluvial rivers. A conceptual model is presented that integrates groundwater and riparian systems into riverine food webs and that reflects the spatiotemporal complexity of the physical system and connectivity between different components. 11. Interstitial metazoans also serve as ’ecosystem engineers, ‘; by influencing the availability of resouces to other species and by modifying habitat conditions within the sediment. For example, by grazing on biofilm, interstitial animals may markedly stimulate bacterial growth rates and nutrient dynamics. 12. Although there has been a recent surge of interest in the role of interstitial animals in running waters, the knowledge gaps are vast. For example, basic environmental requirements of the majority of groundwater metazoans remain uninvestigated. Virtually nothing is known regarding the role of biotic interactions in structuring faunal distribution patterns across groundwater/riparian boundary zones. Interstitial metazoans may contribute significantly to the total productivity and energy flow of the biosphere, but such data are not available. Nor are sufficient data available to determine the contribution of groundwater animals to estimates of global biodiversity. 13. Effective ecosystem management must include groundwater/riparian ecotones and interstitial metazoans in monitoring and restoration efforts. Evidence suggests that a ’connected ‘; groundwater/riparian system provides natural pollution control, prevents clogging of sediment interstices and maintains high levels of habitat heterogeneity and successional stage diversity. River protection and restoration should maintain or re-establish at least a portion of the natural fluvial dynamics that sustains the ecological integrity of the entire riverine–floodplain–aquifer ecosystem. Keywords: groundwater/riparian ecotones, hyporheic habitat, epigean, hypogean, interstitial fauna, biodiversity, food webs     

Does Channel Incision Affect In‐stream Habitat? Examining the Effects of Multiple Geomorphic Variables on Fish Habitat

Incised river channels are dynamic components of fluvial systems, represent geomorphic degradation, and are encountered worldwide. Ecological effects of incision can be far‐reaching, affecting habitat availability and channel processes. Although incision can reflect habitat degradation, some studies suggest that important in‐stream habitats do not differ with the degree of incision. Therefore, we tested whether in‐stream habitat variables that are important to imperiled fishes differ in river reaches with varying degrees of incision. Because incision (measured using entrenchment ratio) had no discernable effect on in‐stream habitat characteristics (i.e., proportion fines, gravel, cobble, and macrophyte occurrence and length), we expanded our analysis to assess the effects of 29 additional geomorphic variables on in‐stream habitat. These analyses indicated that bank height, bed mobility, D₈₄, cross‐sectional area, bankfull width, and wetted perimeter accounted for 42% of macrophyte occurrence and 64% of macrophyte length variance. Postflood surveys indicated that macrophyte occurrence on cobble declined as bank height and bed mobility increased, and sediment size decreased, suggesting that sediment size and bed mobility have a stronger influence on in‐stream habitat than incision. Although channel incision often indicates environmental degradation, important aspects of habitat are not described by this measurement. Strategies that depend on incision to identify restoration sites may have limited habitat benefits in Southeastern Piedmont streams and rivers. Instead, landscape or shoal‐scale restoration approaches that increase coarse sediment proportions may increase macrophyte occurrence, length, and persistence. Sediment budgets that identify coarse and fine sediment sources and transport may be useful to prioritize restoration approaches.     

A comparison of habitat diversity and interannual habitat dynamics in actively and passively restored mountain rivers of Germany

We compared habitat diversity and morphodynamics of ‘actively’ restored reaches (including removal of bank fixation, widening and large wood placement) with ‘passively’ restored reaches (abandonment of channel maintenance) and adjacent non-restored control reaches in medium-sized Central European mountain rivers. Habitat diversity and river morphology were mapped in two consecutive years and changes in habitat composition (channel features, substrates) and morphological changes (active depth and width) were quantified. In both years, habitat diversity was generally higher in the restored reaches compared to their non-restored counterparts, and significantly differed between restoration approaches, with average values in actively restored reaches being about 60% larger than in passively restored reaches. Channel feature composition differed significantly, both between restored and unrestored reaches, and between restoration approaches, whereas substrate composition was similar in all investigated reaches, indicating that restoration had a higher effect on mesohabitat than on microhabitat conditions. Interannual habitat dynamics in respect to channel feature composition were larger in the actively restored compared to the passively restored reaches, while substrate composition remained fairly constant in all reaches. Regarding morphodynamics, changes in depth and width of actively restored reaches differed significantly from changes in passively restored ones in three of the four elements compared. Our findings imply increased habitat richness, diversity and habitat dynamics in the restored reaches, especially in actively restored ones. Analysis of discharge data suggests that flood events exceeding critical shear stress of the bed material, and the time span since restoration determine the potential for morphological changes.     

Geomorphology and fish assemblages in a Piedmont river basin, U.S.A.

1. We investigated linkages between fishes and fluvial geomorphology in 31 wadeable streams in the Etowah River basin in northern Georgia, U.S.A. Streams were stratified into three catchment sizes of approximately 15, 50 and 100 km², and fishes and geomorphology were sampled at the reach scale (i.e. 20–40 times stream width). 2. Non‐metric multidimensional scaling (NMDS) identified 85% of the among‐site variation in fish assemblage structure and identified strong patterns in species composition across sites. Assemblages shifted from domination by centrarchids, and other pool species that spawn in fine sediments and have generalised food preferences, to darter‐cyprinid‐redhorse sucker complexes that inhabit riffles and runs, feed primarily on invertebrates, and spawn on coarser stream beds. 3. Richness and density were correlated with basin area, a measure of stream size, but species composition was best predicted (i.e. |r| between 0.60–0.82) by reach‐level geomorphic variables (stream slope, bed texture, bed mobility and tractive force) that were unrelated to stream size. Stream slope was the dominant factor controlling stream habitat. Low slope streams had smaller bed particles, more fines in riffles, lower tractive force and greater bed mobility compared with high slope streams. 4. Our results contrast with the ‘River Continuum Concept’ which argues that stream assemblages vary predictably along stream size gradients. Our findings support the ‘Process Domains Concept’, which argues that local‐scale geomorphic processes determine the stream habitat and disturbance regimes that influence stream communities.     

Seasonal changes in habitat suitability for adult shovelnose sturgeon in the lower Mississippi River

Shovelnose sturgeon Scaphirhynchus platorynchus are a large‐river fish distributed throughout the Mississippi River basin, including the lower 1,533 km of the Mississippi River where riverine habitat has been and continues to be modified for navigation and is a potential site for development of instream hydrokinetic electric power generation. Information about habitat use and preference is essential to future conservation efforts. Shovelnose sturgeon have previously been found to select particular habitat types, and these selected habitats vary seasonally; although these past analyses do not consider the selected habitats in a landscape context. We used ecological niche factor analysis (ENFA) that uses distributions of telemetry locations and environmental variables to model habitat suitability in a landscape context. We recorded 333 locations of shovelnose sturgeon during July–December 2013 that included periods of relatively high and low river stages. The ENFA analysis indicated high‐suitability locations were in or near deep water during both high and low river stages. During high river stages, high‐suitability locations were near island tip habitat, deep water, and steep bottom slope and far from main channel habitat. During low stages, high‐suitability locations were in or near deep water and main channel habitat and far from secondary channel and wing dike habitats. This landscape‐scale analysis supports seasonal shifts in habitat use and provides insights that can be used to inform habitat conservation and management to benefit shovelnose sturgeon in the lower Mississippi River and possibly other large rivers.     

Should ‘wetlands’ cover all aquatic ecosystems and do macrophytes make a difference to their ecosystem services?

The Ramsar Convention has gradually expanded the scope of the term ‘wetland’ to bring under its umbrella all kinds of inland freshwater (and saline) ecosystems as well as many marine ecosystems. It is not possible to develop a common framework for the study, management or policy of such a large and divergent assemblage of habitats with water being a single shared feature. In this paper, I argue that wetlands are distinct from deep open water systems such as rivers, lakes and reservoirs. The restriction of macrophytes (except the free floating plants like salvinia and water hyacinth) to shallow water habitats helps distinguish between wetlands and deep water systems. Following an ecosystem service approach, I discuss that wetlands are generally characterized by the occurrence of macrophytes, which critically contribute to their provisioning, regulating, supporting and cultural ecosystem services that differ significantly from those of the microphyte (phytoplankton)-dominated deep water habitats. I argue that wetlands do lie adjacent to deep and open water systems (including large rivers), which interact with them regularly and influence their biodiversity, hydrology, water quality and functioning, depending upon their relative areal extent and characteristics of the macrophyte community, but that only the littoral zones between the mean highest and lowest water levels (and stream banks and the floodplains beyond them in the case of rivers) should be treated as wetlands. Shallow lakes devoid of macrophytes because of eutrophication are degraded wetlands that need to be restored.     

Constraints on recovery: using molecular methods to study connectivity of aquatic biota in rivers and streams

1. The ‘Field of Dreams Hypothesis’ states ‘if we build it, they will come’, referring to the assumption that if habitats are restored, species will recolonise them. However, the ability of a species to recolonise a restored site will depend not only on the appropriate habitat being present, but also on the ability to get there. This is likely to depend on both the species’ dispersal behaviour and the position of a site in the landscape. 2. Animals with good potential for dispersal are more likely to be able to disperse to newly restored sites. Similarly, sites in lowland streams with limited altitudinal differences between sites may be easier to reach than upstream sites. This is because upstream sites are connected to one another via lowland streams that have different characteristics and therefore may be difficult for animals to traverse. 3. In this paper, genetic data from a range of freshwater species that have been analysed in my laboratory are used to assess the importance of life cycle and position in the landscape (i.e. upland versus lowland streams) on connectivity patterns (and thus recolonisation potential) among populations. 4. In general, contemporary dispersal across catchment boundaries is negligible, except for aquatic insects with an adult flight stage. Dispersal among streams within catchments appears to be more limited than was predicted from knowledge on life histories, except for fish in lowland rivers and streams. 5. As predicted, dispersal of fish, crustaceans and molluscs among streams within catchments is significantly greater in lowland rivers than in upland streams. 6. Overall, these analyses suggest that, with the exception of most insects, and fishes in lowland rivers, natural recolonisation of restored sites is only likely from sites within the same stream. If a species has disappeared from the whole stream, then restoration of habitat alone may not be sufficient for its re‐establishment.     

Be cool: A review of hydro-physical changes and fish responses in winter in hydropower-regulated northern streams

Winter is an ecologically challenging season for ectothermic cold-water fish in natural streams because of reduced flow and freezing. Hydropower regulation in many northern rivers increase winter stream flow and temperatures, and reduce ice formation and surface ice cover. From a background review of knowledge about e.g. Atlantic salmon (Salmo salar) and brown trout (Salmo trutta) winter survival strategies, we explore responses to hydropower impacts as a basis for adaptive management, mitigating strategies, and future research. Winter intensity and duration, hydrologic conditions and channel characteristics drive complex ice processes which become more complex and pervasive in smaller, high-gradient streams. Stream ice formation may be divided into the dynamic period ‘freeze-up’ in early winter with sub-surface ice, more stable ‘mid-winter’ with surface ice, and the ecologically challenging ‘ice break-up’ in winter-spring with potential mechanical ice runs and scouring. The characteristics of periods vary depending on climate and hydropower regulation. In reaches downstream of power-plant outlets water temperature may increase and reduce surface ice formation. The mid-winter period destabilize or become absent. In bypass reaches flows decrease and facilitate freezing and ice production. Knowledge about longitudinal water temperature changes is limited. Hydro-peaked systems may aggravate high-low flow effects. A basic winter survival strategy in salmon and trout is energy storage, but also reduced metabolism, tolerance and starvation effected by quiescence. Energy storage may depend on local conditions, but there is little indication of adaptation to local thermal climates. Intraspecific phenotypic plasticity is important. The main behavioural strategy is risk-reducing sheltering in the substratum or deep areas, and nocturnal activity. Local movements between daytime refuges and nighttime slow-current activity areas are usually limited to meters. Larger fish may move more and aggregate in restricted suitable deep-slow refuge habitats such as pools and deep glides. Fish cope with ordinary thermal ice phenomena, and do not appear to become trapped in ice. Surface ice may reduce fish metabolism, but other factors, e.g. availability of substrate shelter, may override this effect. Mechanical ice break-ups and less surface ice may reduce survival. An adaptive mitigating strategy may be higher regulated flows in winter which increase rearing and/or resting habitat and survival, but studies are few and knowledge is limited. However, higher regulated flows also affect temperature regime. Low flows increase ice formation, reduce and fragment available habitat, and may reduce egg and fish survival. Influx of ground water may mitigate these impacts, as will stabilize minimum flows. Sudden drops in regulated water discharge should be avoided. Fish may strand, in particular at low temperatures in the daytime when fish are less mobile and seek shelter. The challenging winter season is understudied, and important management considerations and future research areas for better adaptive management are suggested.     

Restoration of macroinvertebrates,fish, and habitats in streams following mining subsidence: replicated analysis across 18 mitigation sites

Human activities have led to declines in stream functioning and stream restoration seeks to reverse this trend. Longwall coal mining, an underground full‐extraction method, can cause surface subsidence, affecting streams by creating a series of deep pools that trap sediment, reduce habitat diversity, and impair macroinvertebrate and fish communities. Mining effects on streams must be mitigated to maintain the functions, values, and foreseeable uses of streams. Gate cutting is a procedure that alleviates pooling by reestablishing the stream grade, accompanied by procedures that stabilize the channel, restore substrates, and enhance in‐stream and riparian habitats. We evaluated effectiveness of gate cuts at restoring streams affected by subsidence pooling at 18 independent restoration sites over two mines in southwestern Pennsylvania, U.S.A. At each site, sampling stations were established to monitor effects of mining subsidence and its restoration on macroinvertebrates, fish communities, and habitats. We tested for effects of sequential interventions (subsidence and restoration) on biological and habitat variables in a replicated before–after design, controlling for potentially confounding temporal effects (sample month and antecedent effective precipitation). All biological indices and substrate‐related habitat indices declined following subsidence but improved following restoration. Macroinvertebrate indicex and taxa richness, substrates, and riparian vegetation continued to improve with time following restoration. Whereas other studies have concluded that biological communities may take many years to respond to restoration, these results indicate that where macroinvertebrate and fish communities are altered by subsidence pooling, they can be effectively restored using gate cuts to pre‐mining levels within relatively short time periods.     

Stream–floodplain connectivity and fish assemblage diversity in the Champlain Valley, Vermont, U.S.A.

To evaluate the influence of main channel–floodplain connectivity on fish assemblage diversity in floodplains associated with streams and small rivers, fish assemblages and habitat characteristics were surveyed at 24 stream reaches in the Champlain Valley of Vermont, U.S.A. Fish assemblages differed markedly between the main channel and the floodplain. Fish assemblage diversity was greatest at reaches that exhibited high floodplain connectivity. Whereas certain species inhabited only main channels or floodplains, others utilized both main channel and floodplain habitats. Both floodplain fish α-diversity and γ-diversity of the entire stream corridor were positively correlated with connectivity between the main channel and its floodplain. Consistent with these results, species turnover (as measured by β-diversity) was negatively correlated with floodplain connectivity. Floodplains with waterbodies characterized by a wide range of water depths and turbidity levels exhibited high fish diversity. The results suggest that by separating rivers from their floodplains, incision and subsequent channel widening will have detrimental effects on multiple aspects of fish assemblage diversity across the stream–floodplain ecosystem.     

Diel variation in surface and subsurface microbial activity along a gradient of drying in an Australian sand-bed stream

1. Microbes play key roles in nutrient transformation and organic matter mineralisation in the hyporheic zone but their short‐term responses to diel variations in discharge and temperature are unknown. Rates of microbial esterase activity were hypothesised to vary vertically and along a gradient of moisture in a drying sand‐bed stream where discharge fluctuated daily in response to evapotranspiration. 2. At ‘fully saturated’, ‘moist’ and ‘dry’ locations in three sites along a drying Australian sand‐bed stream, microbial activity at three depths (surface, 10 and 30 cm) was assessed using fluorescein diacetate hydrolysis. Samples were collected in mid‐summer in the late afternoon and again at dawn to assess diel variation in hydrolytic activity at each site and depth. Data loggers tracked diel variations in temperature at each depth. 3. Hydrolytic activity was up to 10‐fold greater in the surface sediments in late afternoon than at dawn in all habitats, and was correlated with surface sediment temperature. Diel differences in activity were not detected at 10 cm, although daily thermal cycles were evident at this depth. Unexpectedly, activity was marginally higher at dawn at 30 cm in all habitats, perhaps reflecting lags in temperature at that depth. 4. Overall, microbial activity declined with depth, strongly correlated with vertical trends in total organic matter and concentrations of dissolved phosphorus. Particulate organic matter, probably buried during a flood 35 days earlier, appeared largely responsible for these vertical trends. On the other hand, there was little evidence for hydrological exchange between much of the hyporheic zone and the surface stream, implying that processes in the subsurface zone of this stream are effectively isolated during baseflow in mid‐summer. 5. Diel cycles of wetting and drying in the moist habitats did not enhance esterase activity relative to the dry or fully saturated habitats. Sediment moisture was not correlated with microbial activity, and mats of senescent algae appeared to inhibit water loss from surface sediments in the moist habitat. In this sand‐bed stream, local diel fluctuations in water level appear to have less influence on microbial activity and mineralisation of organic matter in the sediments than occasional floods that bury leaf litter and renew many hyporheic zone functions. Subreach‐scale processes seem to be the major driving force of microbial processes and nutrient cycling in this sand‐bed river.     

Wood abundance in urban and rural streams in northwestern South Carolina

Hydrobiologia - In streams and rivers, wood from riparian vegetation contributes to habitat complexity and substrates for stream biota, influences channel geomorphology, alters flow, retains...     

Disturbance history influences the distribution of stream invertebrates by altering microhabitat parameters: a field experiment

1. We investigated the effects of local disturbance history and several biotic and abiotic habitat parameters on the microdistribution of benthic invertebrates after an experimental disturbance in a flood‐prone German stream. 2. Bed movement patterns during a moderate flood were simulated by scouring and filling stream bed patches (area 0.49 m²) to a depth of 15–20 cm. Invertebrates were investigated using ceramic tiles as standardized substrata. After 1, 8, 22, 29, 36 and 50 days, we sampled one tile from each of 16 replicates of three bed stability treatments (scour, fill and stable controls). For each tile, we also determined water depth, near‐bed current velocity, the grain size of the substratum beneath the tile, epilithic algal biomass and standing stock of particulate organic matter (POM). 3. Shortly after disturbance, total invertebrate density, taxon richness and density of the common taxa Baetis spp. and Chironomidae were highest in stable patches. Several weeks after disturbance, by contrast, Baetis spp. and Hydropsychidae were most common in fill and Leuctra spp. in scour patches. The black fly Simulium spp. was most abundant in fill patches from the first day onwards. Community evenness was highest in scour patches during the entire study. 4. Local disturbance history also influenced algal biomass and POM standing stock at the beginning of the experiment, and water depth, current velocity and substratum grain size throughout the experiment. Scouring mainly exposed finer substrata and caused local depressions in the stream bed characterized by slower near‐bed current velocity. Algal biomass was higher in stable and scour patches and POM was highest in scour patches. In turn, all five common invertebrate taxa were frequently correlated with one or two of these habitat parameters. 5. Our results suggest that several ‘direct’ initial effects of local disturbance history on the invertebrates were subsequently replaced by ‘indirect’ effects of disturbance history (via disturbance‐induced changes in habitat parameters such as current velocity or food).     

Interpreting spatial patterns in redox and coupled water–nitrogen fluxes in the streambed of a gaining river reach

Water pathways through permeable riverbeds are multi-dimensional, including lateral hyporheic exchange flows as well as vertical (upwelling and downwelling) fluxes. The influence of different pathways of water on solute patterns and the supply of nitrate and other redox-sensitive chemical species in the riverbed is poorly understood but could be environmentally significant. For example, nitrate-rich upwelling water in the gaining reaches of groundwater-fed rivers has the potential to supply significant quantities of nitrate through the riverbed to surface waters, constraining opportunities to deliver the goals of the EU Water Framework Directive to achieve ‘good ecological status’. We show that patterns in porewater chemistry in the armoured river bed of a gaining reach (River Leith, Cumbria) reflect the spatial variability in different sources of water; oxic conditions being associated with preferential discharge from groundwater and reducing conditions with longitudinal and lateral fluxes of water due to water movement from riparian zones and/or hyporheic exchange flows. Our findings demonstrate the important control of both vertical and lateral water fluxes on patterns of redox-sensitive chemical species in the river bed. Furthermore, under stable, baseflow conditions (<Q₉₀) a zone of preferential discharge, comprising 20 % of the reach by area contributes 4–9 % of the total nitrate being transported through the reach in surface water, highlighting the need to understand the spatial distribution of such preferential discharge locations at the catchment scale to establish their importance for nitrate delivery to the stream channel.     

Responses of riparian plant communities and water quality after 8 years of passive ecological restoration using a BACI design

This study investigated the consequences of passive ecological restoration on a riparian habitat and on water quality. The restoration plan consists of excluding livestock by constructing fences along an entire stream 1 m from the stream bed, with the assumption that recovering riparian habitat will restore their ecological processes (e.g., filtration, soil stabilization). We measured responses of riparian plant communities and physico-chemical water quality. We presented data from an 8-year before-after control-impact design across a reference stream and a restored stream in a rural landscape in Normandy, France. Restoration appeared to modify plant communities. After 8 years of restoration, the restored stream had a complex riparian bank, similar to that of the reference stream, with an increase in the number of trees, a decrease in bare soil, and an increase in habitat heterogeneity. Despite this modification, water quality did not improve. The same low water quality in the reference stream demonstrated the need for a watershed-scale approach and for actions to improve agricultural practices before implementing restoration practices at a smaller scale. Nonetheless, the lack of improved water quality does not necessarily mean that the restoration failed. Other functions and services can be provided by excluding livestock.     

Suitability Modeling of Lake Sturgeon Habitat in Five Northern Lake Michigan Tributaries: Implications for Population Rehabilitation

The availability of lotic spawning, staging, and nursery habitats is considered a major factor limiting the recovery of Lake sturgeon ( Acipenser fulvescens ) in Lake Michigan. Despite efforts to better understand the population biology and habitat use of remnant Lake sturgeon stocks, little information exists on the quantity, quality, and spatial distribution of habitats for riverine life stages. We applied georeferenced habitat information on substrate, water depth, and stream gradient to a Lake sturgeon habitat suitability index in a geographic information system to produce spatially explicit models of life stage–specific habitat characteristics in the Menominee River, Michigan–Wisconsin; the Peshtigo, Oconto, and lower Fox rivers, Wisconsin; and the Manistique River, Michigan. High-quality Lake sturgeon spawning habitat associated with coarse substrates (≥2.1 mm) and moderate- to high-stream gradients (≥0.6 m/km) comprised 1–6% of the available habitat in each system. Staging habitat characterized by water depths greater that 2 m located near potential spawning habitat comprised an additional 17–41%. However, access to a majority of these habitat types (range 30–100%) by Lake sturgeon from Lake Michigan is currently impeded by dams. High-quality juvenile Lake sturgeon habitat associated with finer substrates, lower stream gradients, and a broad range of water depths (i.e., 0.5–8 m) was relatively ubiquitous throughout each system and comprised 69–100% of the available habitat. Our study suggests that efforts to rehabilitate Lake sturgeon populations should consider providing fish passage and creating supplemental spawning habitat to increase reproductive and recruitment potential.     

Transport and settlement of organic matter in small streams

1. After it enters streams, terrestrially derived organic matter (OM) rapidly absorbs water. Using field and laboratory experiments, we examined how this process affected the buoyancy, settling velocity, transport distance and retention locations of four types of organic matter typically found in Pacific coastal streams (‘flexible’ red alder leaves and three ‘stiff’ particle types – Douglas‐fir needles, red cedar fronds and Douglas‐fir branch pieces). 2. Immersion in water rapidly changed the physical characteristics of alder leaves, Douglas‐fir needles and red cedar fronds, which all reached constant still‐water settling velocities after only a few days of soaking. In contrast, the settling velocity of branch pieces continued to increase for 13 days, eventually reaching much higher values than any other OM type. Dried alder leaves became negatively buoyant after only two days of immersion, while other types took substantially longer (up to 24 days) before the specific gravity of all particles was >1. 3. We released saturated OM particles in an experimental channel and found that all particle types travelled further in a fast, shallow ‘riffle’ than a slow, deep ‘pool’. Comparisons with a passive settlement null model indicated that leaves were retained more rapidly than expected in the riffle (by large protruding stones), while the three stiff particle types travelled further than expected (probably due to turbulent suspension) and were retained when they settled in deeper water between larger stones. In pools, passive settlement appeared to dominate the retention of all OM types, with leaves travelling furthest. 4. These retention patterns corresponded well with those observed when saturated OM particles collected in the field were released in two pools and two riffles in a second‐order coastal stream. 5. When the experimental channel and in‐stream data were combined, the retention rates of the three stiff OM types were closely related to calculated Rouse numbers (Rouse number = particle settling velocity/shear velocity), whereas the retention rate of alder leaves was not. This suggests that different physical mechanisms are responsible for the retention of leaves and stiff OM types in shallow streams.     

Migratory drift of larval freshwater shrimps in two tropical streams, Puerto Rico

1. Migratory shrimps are often major biotic components of tropical stream communities, yet spatial and temporal patterns of their migration have yet to be described. This information is of increasing importance given the continued fragmentation of tropical streams by damming and water abstraction/diversion, which can disrupt migratory life cycles. 2. Larval amphidromous shrimps are released by adult females in freshwater streams. They then drift passively to an estuarine habitat where they metamorphose before migrating back upstream. Drift of larval shrimps was sampled over two to five 24-h periods at each of three sites along two rivers that drain the Luquillo Experimental Forest in Puerto Rico: the Espíritu Santo (10, 135 and 335 m a.s.l.) and the Mameyes (10, 90 and 290 m a.s.l.). A total of seventeen diel samplings were conducted. 3. Shrimp drift increased in the downstream direction in both catchments, and had a significant positive exponential relationship with length of stream channel above each site. There was no significant difference between catchments with respect to mean daily drift rate per km of stream channel. Maximum observed larval shrimp density was 69 102 larvae 100 m^–3 (1.7 g dry mass 100 m^–3), which is high relative to published invertebrate drift studies. 4. The pattern of shrimp drift agreed with the ’risk of predation hypothesis‘. In stream reaches with predatory fish, drift of larval shrimps occurred at night and was slight during the day. A nocturnal peak in drift occurred between 19.00 and 22.00 h. At a high-altitude site, where predatory fish were absent, no diel pattern was discernible. 5. The present study provides information on the timing of migratory drift of larval shrimps, which can minimize the adverse effects of water abstraction from streams draining the Luquillo Experimental Forest. Elimination of water withdrawal during peak larval drift after dark will significantly reduce shrimp mortality.     

Niche partitioning and the effect of interspecific competition on microhabitat use by two sympatric galaxiid stream fishes

1. Numerous interacting abiotic and biotic factors influence niche use and assemblage structure of freshwater fishes, but the strength of each factor changes with spatial scale. Few studies have examined the role of interspecific competition in structuring stream fish assemblages across spatial scales. We used field and laboratory approaches to examine microhabitat partitioning and the effect of interspecific competition on microhabitat use in two sympatric stream fishes (Galaxias‘southern’ and Galaxias gollumoides) at large (among streams and among sites within streams) and small (within artificial stream channels) spatial scales. 2. Diurnal microhabitat partitioning and interspecific competition at large spatial scales were analysed among three sympatry streams (streams with allotopic and syntopic sites; three separate catchments) and four allopatry streams (streams with only allotopic sites; two separate catchments). Electro‐fishing was used to sample habitat use of fishes at 30 random points within each site by quantifying four variables for each individual: water velocity, depth, distance to nearest cover and substratum size. Habitat availability was then quantified for each site by measuring those variables at each of 50 random points. Diet and stable isotope partitioning was analysed from syntopic sites only. Diel cycles of microhabitat use and interspecific competition at small spatial scales were examined by monitoring water velocity use over 48 h in artificial stream channels for three treatments: (i) allopatric G. ‘southern’ (10 G. ‘southern’); (ii) allopatric G. gollumoides (10 G. gollumoides) and (iii) sympatry (five individuals of each species). 3. One hundred and ninety‐four G. ‘southern’ and 239 G. gollumoides were sampled across all seven streams, and habitat availability between the two species was similar among all sites. Galaxias‘southern’ utilised faster water velocities than G. gollumoides in both the field and in channel experiments. Both species utilised faster water velocities in channels at night than during the day. Diet differences were observed and were supported by isotopic differences (two of three sites). No interspecific differences were observed for the other three microhabitat variables in the field, and multivariate habitat selection did not differ between species. Interspecific competition had no effect on microhabitat use of either species against any variable either in the field (large scale) or in channels (small scale). 4. The results suggest that niche partitioning occurs along a subset of microhabitat variables (water velocity use and diet). Interspecific competition does not appear to be a major biotic factor controlling microhabitat use by these sympatric taxa at any spatial scale. The results further suggest that stream fish assemblages are not primarily structured by biotic factors, reinforcing other studies de‐emphasising interspecific competition.     

Habitat filtering and adult dispersal determine the taxonomic composition of stream insects in an urbanizing landscape

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