Isolation and characterization of microsatellite loci for the collared pika (Ochotona collaris) and their cross-amplification in five other Ochotona species

We developed primers for eight polymorphic microsatellite loci isolated from the collared pika, Ochotona collaris, and also tested nine loci previously developed for the American pika, O. princeps, for use in O. collaris. Forty-six individuals from an O. collaris population in the southern Yukon were genotyped using all 17 loci. The average number of alleles per locus was six and the average observed heterozygosity was 0.59. All loci were tested for use in four Asian pika species and all but two loci amplified reliably in these species.     

Gene flow and the restoration of genetic diversity in a fluctuating collared pika (Ochotona collaris) population

Changes in the density of small mammal populations can alter their genetic diversity and structure over time. Repeated density declines may gradually erode a population’s genetic variability, and ultimately undermine its long-term viability. We investigated changes in the genetic diversity and structure of a fluctuating collared pika (Lagomorpha: Ochotona collaris) population over 12 years. There are concerns that the long-term persistence of the collared pika is at risk due to climate change, as pika populations are sensitive to environmental variability and inhabit a region undergoing particularly rapid warming. The study population declined abruptly during 2000 and 2003; however, it subsequently recovered and failed to show any genetic signature of having undergone a bottleneck. There was also no evidence for widespread inbreeding before or after the population declines. Using a spatial autocorrelation analysis, we also documented positive fine-scale genetic structure (<250 m) in the population during 7 out of the 12 years examined. Although the genetic structure is consistent with low average dispersal distances, a GeneClass2 analysis indicated that the collared pika population received immigrants from other populations, some of which survived and bred. Thus, like many other fluctuating small mammal populations, the collared pika population studied here appears to be resilient to density fluctuations. Dispersal distances were adequate for allowing gene flow into the study population and preventing declines in genetic variability.     

The effect of habitat fragmentation on dispersal patterns, mating behavior, and genetic variation in a pika (Ochotona princeps) metapopulation

 Habitat fragmentation is becoming increasingly common, yet, the effect of habitat spatial structure on population dynamics remains undetermined for most species. Populations of a single species found in fragmented and nonfragmented habitat present a rare opportunity to examine the effect of habitat spatial structure on population dynamics. This study investigates the impact of highly fragmented habitat on dispersal patterns, mating behavior, and genetic variation in a pika (Ochotona princeps) population with a mainland-island spatial structure. Juvenile dispersal patterns in fragmented habitat revealed that individuals tended to disperse to neighboring habitat patches. However, within-patch band-sharing scores from multilocus DNA fingerprints did not differ from what would be expected if individuals were assorting randomly among habitat patches each year. Multiple, short-distance dispersal targets for juveniles and occasional long-distance dispersal events suggest that habitat fragmentation on this scale has not resulted in restricted dispersal and a genetically subdivided population. Although pikas tended to mate with the closest available partner, DNA fingerprinting band-sharing scores between mated pairs were consistent with a random mating hypothesis. Random mating in this population appears to be an incidental effect of dispersal in a fragmented habitat. This pattern is distinct from that found in nonfragmented habitat (large talus patches) where mating was non-random and consistent with mating between individuals of intermediate relatedness. DNA fingerprinting data revealed within-species variation in the mating habits of the pika directly attributable to habitat spatial structure. Received: 4 November 1996 / Accepted: 30 June 1997     

Effects of Acomastylis rossii tannins on a mammalian herbivore,the North American pika,Ochotona princeps

 I investigated the effects of tannin consumption, using plant tannins naturally occurring in the diet, on a herbivorous mammal, the North American pika, Ochotona princeps. The objectives were to determine if a high-tannin diet influenced protein and dry matter apparent digestibility, fiber digestibility and production of detoxification by-products. Additionally, I examined the possibility that pikas produce salivary tannin-binding proteins, a potential mechanism for avoiding detrimental effects of tannins. My results demonstrate that although pikas constitutively produce salivary tannin-binding proteins, animals consuming a high-tannin diet of Acomastylis rossii exhibited lower dry matter, protein and fiber digestion and excreted higher concentrations of detoxification by-products. Thus, A. rossii tannins are potential toxins as well as digestibility reducers. I propose a hypothesis coupling detoxification to reduced fiber digestion that is applicable to pikas as well as other mammalian herbivores consuming phenolic-rich diets. Received: 31 July 1995 / Accepted: 9 July 1996     

Interannual Variation in Timing of Parturition and Growth of Collared Pikas (Ochotona collaris) in the Southwest Yukon

The length of the snow-free season has a significant influenceon reproduction and growth in northern alpine environments,and these life history traits may provide sensitive indicatorsof the responses of organisms to climate change. We examinedgrowth rates and timing of parturition of collared pikas (Ochotonacollaris) from 1995–2002 in the Ruby Range, Yukon Territory,Canada. Growth rates were best described using a Gompertz model,in which the asymptotic mass, determined from the average maleand female weights, was 157 g, the growth rate constant (K)was 0.0557, and the age at inflection (I) was 18.12 days, fora birth weight of 10 g. The maximum growth rate for North Americanpikas (O. collaris and O. princeps) increased with latitude,with maximum growth rates being approximately one-third greaterin northern populations where the snow-free season is less thanthree months long. The mean parturition date varied significantlyamong years from 3 June to 3 July, and delayed parturition wascorrelated with indices of high snow accumulation and, to alesser extent, late spring snowmelt. However, parturition datedid not significantly affect the subsequent over-winter survivalof juveniles in this population, suggesting that pikas are ableto adjust to seasonal uncertainty associated with highly variablespring conditions.     

Case reports of bot fly myiasis in pikas (Ochotona princeps)

Six cases of bot fly (Cuterebra spp.) myiasis in pikas (Ochotona princeps) are reported from Oregon and Montana. These are the first known cases of Cuterebra parasitism of pikas.     

Forage selection by Royle's pika (Ochotona roylei) in the western Himalaya,India

Forage selection decisions of herbivores are often complex and dynamic; they are modulated by multiple cues, such as quality, accessibility and abundance of forage plants. To advance the understanding of plant–herbivore interactions, we explored foraging behavior of the alpine lagomorph Royle's pika (Ochotona roylei) in Kedarnath Wildlife Sanctuary, India. Pika bite counts on food plants were recorded through focal sampling in three permanently marked plots. Food plant abundance was recorded by traditional quadrat procedures; forage selection was estimated with Jacob's selection index. Multiple food-choice experiments were conducted to determine whether forage selection criteria would change with variation in food plant composition. We also analyzed leaf morphology and nutrient content in both major food plants and abundantly available non-food plants. Linear regression models were used to test competing hypotheses in order to identify factors governing forage selection. Royle's pika fed primarily on 17 plant species and each forage selection decision was positively modulated by leaf area and negatively modulated by contents of avoided substances (neutral detergent fiber, acid detergent fiber, acid detergent lignin and tannin) in food plants. Furthermore, significance of the interaction term “leaf size × avoided substance” indicates that plants with large leaves were selected only when they had low avoided substance content. The forage selection criteria did not differ between field and laboratory experiments. The parameter estimates of best fit models indicate that the influence of leaf size or amount of avoided substance on pika forage selection was modulated by the magnitude of predation risk.     

Fine structure of the mandibular gland in pika (Ochotona rufescens rufescens)

The mandibular gland of the pika was examined by light microscopy, and transmission and scanning electron microscopies. The acinar cells were noted to be composed of serous cells and seromucous cells. The serous cells containing granules of moderate and high densities were slightly basophile and strongly positive to PAS, but were not stained with AB. The seromucous cells possessing less dense granules were light and moderately positive to PAS and AB. A sexual dimorphism was observed between these cells: Serous cells were considerably more frequent in males and seromucous cells were more numerous in females. Intercalated duct cells consisted of cuboidal light cells containing a few vesicles in the apical region. Striated ducts were comprised of two portions--a secretory portion and a typical striated portion without secretory granules. The secretory portion was composed of light and dark cells having secretory granules varying in size and density. The epithelium of typical striated portion consisted of light and dark cells containing fine vacuoles and vesicles.     

Functional difference of malate-aspartate shuttle system in liver between plateau zokor (Myospalax baileyi) and plateau pika (Ochotona curzoniae)

To explore the adaptive mechanisms of plateau zokor (Myospalax baileyi) to the enduring digging activity in the hypoxic environment and of plateau pika (Ochotona curzoniae) to the sprint running activity, the functional differences of malate-aspartate shuttle system (MA) in liver of plateau zokor and plateau pika were studied. The ratio of liver weight to body weight, the parameters of mitochondria in hepatocyte and the contents of lactic acid in serum were measured; the open reading frame of cytoplasmic malate dehydrogenase (MDH1), mitochondrial malate dehydrogenase (MDH2), and the partial sequence of aspartate glutamate carrier (AGC) and oxoglutarate malate carrier (OMC) genes were cloned and sequenced; MDH1, MDH2, AGC and OMC mRNA levels were determined by real-time PCR; the specific activities of MDH1 and MDH2 in liver of plateau zokor and plateau pika were measured using enzymatic methods. The results showed that, (1) the ratio of liver weight to body weight, the number and the specific surface of mitochondria in hepatocyte of plateau zokor were markedly higher than those of plateau pika (P < 0.01 or P < 0.05), but the content of lactic acid in serum of plateau pika was significantly higher than that of plateau zokor (P < 0.01); (2) MDH1 and MDH2 mRNA levels as well as their enzymatic activities in liver of plateau zokor were significantly higher than those of plateau pika (P < 0.01 or 0.05), AGC mRNA level of the zokor was significantly higher than that of the pika (P < 0.01), while no difference was found at OMC mRNA level between them (P > 0.05); (3) mRNA level and enzymatic activity of MDH1 was significantly lower than those of MDH2 in the pika liver (P < 0.01), MDH1 mRNA level of plateau zokor was markedly higher than that of MDH2 (P < 0.01), but the activities had no difference between MDH1 and MDH2 in liver of the zokor (P > 0.05). These results indicate that the plateau zokor obtains ATP in the enduring digging activity by enhancing the function of MA, while plateau pika gets glycogen for their sprint running activity by increasing the process of gluconeogenesis. As a result, plateau pika converts the lactic acid quickly produced in their skeletal muscle by anaerobic glycolysis and reduces dependence on the oxygen.     

高原鼠兔ob基因的组织表达特征

ob基因编码的leptin蛋白在调节生物体能量平衡中起到重要作用。本研究应用Taqman探针real time PCR技术对高原鼠兔ob基因的组织分布进行检测。通过提取不同组织总RNA,经DNase I消化后,用随机引物进行反转录合成cDNA,采用特异性Taqman探针和引物分别对ob基因及β-actin基因进行实时定量PCR扩增,对不同组织中ob基因和β-actin基因的初始拷贝数之比进行比较。结果表明ob基因在脑、心脏、肺、肝脏、脾脏、肾脏、骨骼肌、脂肪组织中均有表达,其中以白色脂肪组织中ob基因表达量最高,其次为心脏和肺,表达量最低的是肝脏和肾脏。     

Isolation and characterization of 13 microsatellite loci in the plateau pika (Ochotona curzoniae)

High quality jumping microsatellite libraries of the plateau pika (Ochotona curzoniae) were constructed; 231 out of the 288 clones contained microsatellite repeat motif and 120 pairs of primers were designed accordingly. Polymorphism was assessed for 48 individuals. Only 13 microsatellite loci were polymorphic with high polymorphism information content (PIC) ranging from 0.598 to 0.871, a condition probably resulting from individuals used for assessment being very closely related. This degree of polymorphism, however, is sufficient to conduct parentage analysis. Expected and observed heterozygosities ranged from 0.219 to 0.935 and 0.659 to 0.890, respectively. One locus was in linkage disequilibrium. This information provides efficient tools to allow future parentage studies. Ke-xin Li and Jia-ning Geng contributed equally to this paper.