Biological Control of Fusarium Wilt in Tomato Caused by Fusarium oxysporum f. sp. lycopersici by AMF Glomus intraradices and some Rhizobacteria

In the present study, the effects of the arbuscular mycorrhizal fungus (AMF) Glomus intraradices Schenck & Smith and four rhizobacteria (RB; 58/1 and D/2: Pseudomonas fluorescens biovar II; 17: P. putida; 21: Enterobacter cloacae), which are the important members of the rhizosphere microflora and biological control agents against plant diseases, were examined in the pathosystem of Fusarium oxysporum f. sp. lycopersici [(Sacc) Syd. et Hans] (FOL) and tomato with respect to morphological parameters (fresh and dry root weight) and phosphorous (P) concentration in the roots. Treatments with single and dual inoculation with G. intraradices and RB strains reduced disease severity by 8.6–58.6%. Individual bacteria inoculations were more effective than both the single AMF and dual (G. intraradices + RB) inoculations. In addition, the RB and G. intraradices enhanced dry root weight effectively. Significant increases in root weights were recorded particularly in the triple inoculations compared with single or dual inoculations. Compared with the non‐treated controls all biological control agents increased P‐content of treated roots of plants. Colonization with RB increased especially in triple (FOL + G. intraradices + RB) inoculations whereas colonization of G. intraradices was significantly decreased in treatment of FOL + G. intraradices compared with triple inoculations. The results suggest that suitable combinations of these biocontrol agents may ameliorate plant growth and health.     

Effect of root exudates of mycorrhizal tomato plants on microconidia germination of Fusarium oxysporum f. sp. lycopersici

The effect of root exudates from mycorrhizal and non-mycorrhizal tomato plants on microconidia germination of the tomato pathogen Fusarium oxysporum f. sp. lycopersici was tested. Microconidia germination was enhanced in the presence of root exudates from mycorrhizal tomato plants. Tomato plants were colonised by the arbuscular mycorrhizal fungus Glomus fasciculatum, indicating that alterations of the exudation pattern depended on the degree of root AM colonisation. Testing the exudates from plants with a high and a low P level revealed that the alterations of the root exudates from mycorrhizal plants, resulting in a changed effect on microconidia germination, are not due to an improved P status of mycorrhizal plants.     

Effects of Membrane Filtering of Tomato Root Exudates on Conidial Germination of Fusarium oxysporum f. sp. lycopersici

The effect of different membrane filters on the bioactivity of tomato root exudates was tested in an in vitro assay addressing the germination of microconidia of the soil-borne fungus Fusarium oxysporum f. sp. lycopersici . Membrane filtration of unsterile root exudates with filters of different membrane materials and filter brands resulted in an increased microconidia germination. This effect varied depending on the used membrane filter but was lacking when sterile root exudates were used. The alteration of the bioactivity of unsterile root exudates therefore seems to be due to the presence of microbial contaminants. The varying effects of different filter brands may be due to their differential potential of retaining inhibitory compounds. When working with root exudates, such effects of membrane filtration have to be taken into account.     

Effect of flavonoids on the development of Fusarium oxysporum f. sp. lycopersici

Abstract

In the present study the effect of flavonoid compounds on the germination and fungal growth of the soil-borne tomato pathogen Fusarium oxysporum f. sp. lycopersici was studied. Out of 12 flavonoid compounds only myricetin and luteolin exhibited a low stimulating activity on microconidia germination of Fusarium oxysporum f. sp. lycopersici, whereas the other flavonoids tested were inactive when applied at five different concentrations. In our study the tested flavonoids affect fungal growth differently to microconidia germination. Individual flavonoid concentrations resulted in a small increase of fungal growth, but the lowest flavonoid concentrations showed an inhibiting effect on fungal growth for all flavonoids tested. There is evidence to suggest, that low flavonoid concentrations exhibit slight antimicrobial properties against Fusarium oxysporum f. sp. lycopersici.     

Development of a TaqMan Real‐Time Polymerase Chain Reaction Assay for Detection and Quantification of Fusarium oxysporum f. sp. lycopersici in Soil

Fusarium wilt, caused by Fusarium oxysporum f. sp. lycopersici (FOL), is an important disease of tomato. Pathogenicity and vegetative compatibility tests, although reliable, are laborious for the identification of FOL isolates and cannot efficiently quantify population densities of FOL in the soil. The objective of this study was to develop a rapid, sensitive and quantitative real‐time polymerase chain reaction (PCR) assay for detecting and quantifying FOL in soil. An inexpensive and relatively simple method for soil DNA extraction and purification was developed based on bead‐beating and a silica‐based DNA‐binding method. A TaqMan probe and PCR primers were designed using the DNA sequence of the species‐specific virulence gene SIX1, which is only present in isolates of FOL, not in isolates of other formae speciales or non‐pathogenic isolates of F. oxysporum. The real‐time PCR assay successfully amplified isolates of three races of FOL used in this study and quantified FOL DNA in soils, with a detection limit of 0.44 pg of genomic DNA of FOL in 20 μl of the real‐time PCR. A spiking test performed by adding different concentrations of conidia to soil showed a significant linear relationship between the amount of genomic DNA of FOL detected by the real‐time PCR assay and the concentration of conidia added. In addition, the real‐time PCR assay revealed a significant quadratic regression for a glasshouse experiment between disease severity and DNA concentration of FOL. The soil DNA extraction method and real‐time PCR assay developed in this study could be used to determine population densities of FOL in soil, develop threshold models to predict Fusarium wilt severity, identify high‐risk fields and measure the impact of cultural practices on FOL populations in soils.     

Microconidia germination of the tomato pathogen Fusarium oxysporum in the presence of root exudates

Abstract

In this study we assessed microconidia germination of the tomato pathogens F. oxysporum f. sp. lycopersici (Fol) and F. oxysporum f. sp. radicis-lycopersici (Forl) in the presence of root exudates. Tomato root exudates stimulated microconidia germination and the level of stimulation was affected by plant age. Treatment of root exudates with insoluble polyvinylpolypyrrolidone, which binds phenolic compounds, indicated that tomato root exudates contain phenolic compounds inhibitory to F. oxysporum microconidia germination. Our study indicates that tomato root exudates similarly stimulate microconidia germination of both Fol and Forl. However, individual F. oxysporum strains differ in the degree of germination response to the root exudates. Furthermore, root exudates from non-host plants also contain compounds that stimulate microconidia germination of Fol. In general, the effects of root exudates from non-host plants did not differ considerably from those of tomato. The ability of phenolic compounds to inhibit germination of Fol seems not to be plant-specific.     

Genetic Diversity of Fusarium oxysporum f.sp. lentis Population Affecting Lentil in Syria

Lentil (Lens culinaris Medik.) is an important food legume crop in Syria. Fusarium wilt (Fusarium oxysporum f.sp. lentis – Fol) is a key yield‐limiting factor in the country. The genetic diversity of Fol population was studied using 96 isolates collected from different parts of the country using molecular markers. A total of 16 markers, random amplified polymorphic DNA, simple sequence repeats and inter‐simple sequence repeats were used and 218 polymorphic markers (scorable bands) were obtained. Cluster and structure analyses grouped the isolates into three major groups and subgroups indicating high genetic diversity in the pathogen populations. The molecular variance within the population accounted 87% of the total variation indicating high diversity within population than among geographic locations. The result of this study showed that no alleles were linked to specific province, and therefore, screening for the Fusarium wilt in one location using virulent isolates could be enough to save time and resources.     

Interactions between arbuscular mycorrhizae and Fusarium oxysporum f. sp. ciceris: effects on fungal development,seedling growth and wilt disease suppression in Cicer arietinum L.

The purpose of present study was to develop a management strategy based on a time effective inoculation of arbuscular mycorrhizal fungi (AMF) to mitigate the yield losses of Cicer arietinum L. due to Fusarium oxysporum f. sp. ciceris (Foc). The interactions between AMF (mycorrhizal consortium; Myc) and Foc were studied in three separate experiments in two successive years (2011 and 2012). In particular, we investigated: the effect of Myc on population density of Foc, the effect of Foc on mycorrhisation (root colonisation index and AMF spore density/50?g sand) and the interactive effects of Myc and Foc on growth, phosphorus (P) content and disease severity index of C. arietinum. Results suggested that pre-inoculating plants with AMF (Myc?+?Foc) considerably reduced Foc population density, while combined (Myc/Foc) and early inoculation of AMF (Myc?+?Foc) increased mycorrhisation, growth and P content of plants. Combined and early inoculation of AMF reduced disease severity index up to 68 and 89.5%, respectively. Thus, the results suggested that soil pretreated with AMF acted as bioprotectant against the Fusarium. In conclusion, Myc should be inoculated before transplantation of crop seedlings to the fields. However, extrapolation of the results to the real field conditions should be done with caution because of differences in growth conditions and substrate used in present study i.e. net house and sand, respectively.     

Emergence of Antagonism Against the Pathogenic Fungus Fusarium oxysporum by Interplay Among Non‐Antagonistic Bacteria in a Hydroponics Using Multiple Parallel Mineralization

The rhizosphere microbial community in a multiple parallel mineralization (MPM) system contributes to suppression of root‐borne diseases. We hypothesized this phenomenon can be attributed to the interplay of non‐antagonistic bacteria rather than to a single antagonistic microbe. In this study, we tested this hypothesis by investigating the potential roles of bacterial interplay in a subset of MPM microbiota in the suppression of the fungal phytopathogen Fusarium oxysporum. Bacterial strains isolated from the MPM system were subjected to in vitro and in planta tests on F. oxysporum. A community of seven bacterial strains (Kaistia sp. TBD58, Sphingopyxis sp. TBD84, Bosea sp. TBD101, Ancylobacter sp. TBD132, Cupriavidus sp. TBD162, Brevibacillus sp. TBD179 and Sphingopyxis sp. TBD181) suppressed F. oxysporum growth. None of the strains alone was antagonistic against F. oxysporum, whereas several pairs of those non‐antagonistic strains inhibited its growth. Morphological observations showed the formation of swollen F. oxysporum cells in the presence of these bacterial pairs. The same bacterial pairs also suppressed Fusarium wilt disease in Arabidopsis thaliana. These results indicate that a complex bacterial interplay among non‐antagonistic bacteria can significantly contribute to the development of antagonism against F. oxysporum in the context of the MPM system.     

Evaluation of arbuscular mycorrhiza and other biocontrol agents in managing Fusarium oxysporum f. sp. Cubense infection in banana cv. Neypoovan

Panama wilt of banana caused by Fusarium oxysporum f. sp. cubense (race 1) is a serious disease devastating the important cultivar Neypoovan (syn Elakki Bale AB) in southern India. Chemical control methods are not very effective in controlling the disease. The objective of this study was to evaluate biocontrol agents (BCAs) under controlled and field conditions for their efficacy against the pathogen and to detect and quantify the reduction in FOC population. Arbuscular mycorrhizal (AM) fungi, Trichoderma harzianum and Pseudomonas fluorescens were inoculated at the time of planting in single, dual and tripartite combinations allowing colonization up to 0, 45 and 90 days. Plants were challenged thereafter with 50 g of FOC inoculum multiplied on sorghum grains containing 1.5×10⁶ cfu g^?1. Uninoculated plants and those inoculated with pathogen only were controls. Plant growth parameters were measured and structural modifications in the roots were studied. FOC populations in the roots were determined by ELISA every month and final yield was recorded. At the end of 7 months, plants pre-inoculated with BCAs i.e., G. mosseae+T. harzianum and challenged with Fusarium under field conditions could sustain 61 and 70% improvement in plant height and girth, respectively, and 75% in bunch weight over plants not precolonised with BCAs but challenged with FOC which finally succumbed to the disease. ELISA study revealed Fusarium population was reduced to 0.58 OD in 7 months in G. mosseae and T. harzianum treatment compared to a level of 1.9 OD in Fusarium alone treated plants. Beneficial effect of BCAs may be due to the over all protection provided by them by causing physical modifications in the cell wall, growth promotion and through induction of disease resistance.     

AM真菌对紫花苜蓿细根生长及其生物量动态特征的影响

细根对植物功能的发挥和土壤碳库及全球碳循环具有重要意义。采用容器法和微根管法于2013年6~10月整个生长季内对紫花苜蓿的细根生物量、生产以及周转规律进行研究。结果表明:(1)紫花苜蓿活细根现存生物量平均值以接种摩西球囊霉(Gm)处理最高(12.46g·m-2),未接种对照最低(7.31g·m-2),并且活细根现存量在9月中旬达到峰值;死细根现存生物量呈先增加后降低再增加的变化趋势,在整个生长过程中未接种处理高于接种处理,接种根内球囊霉(Gi)处理死细根现存平均生物量(3.11g·m-2)又较接种组其他处理低。(2)苜蓿植株细根生长量以接种幼套球囊霉(Ge)处理最大(0.045 mm·cm-2·d-1),接种Gm处理和未接种对照最低(均为0.027mm·cm-2·d-1);而未接菌植株细根死亡量(0.044mm·cm-2·d-1)显著高于接种植株,接种组又以Gi处理最低(0.021mm·cm-2·d-1)。(3)紫花苜蓿在生长季节内细根生产和死亡的高峰分别出现在8月底和10月份,低谷出现在9月底到10月中旬和6月底到8月;接种地表球囊霉(Gv)后细根现存量和年生长量显著高于对照和接种其他菌种处理,细根的周转以对照组最大,而接种Gv和Gm处理较低。研究发现,通过接种丛植菌根真菌可以提高苜蓿细根生物量,降低细根的死亡,增加细根寿命。     

First Report of Stem Canker on Phoenix Tree (Firmiana simplex) Caused by Fusarium oxysporum in China

A stem canker disease was observed on the phoenix trees located in the region of Dezhou, Shandong province. Symptomatic stems were collected and evaluated for the possible casual agent of the disease. A fungus resembling Fusarium sp. was consistently isolated from pieces of symptomatic tissues. The fungus formed abundant aerial mycelium on potato dextrose agar and produced the micro‐ and macro‐conidia on carnation leaf agar. The nucleotide sequences of the internal transcribed spacer of the rDNA from three representative isolates showed 100% identical to those of Fusarium oxysporum isolates deposited in the GenBank database. On the basis of morphological characteristics, pathogenicity test and molecular identification, the causal agent was identified as F. oxysporum. To our knowledge, this is the first report of stem canker on phoenix tree caused by F. oxysporum in China.     

Development of Pathogenicity and AFLP to Characterize Fusarium oxysporum f.sp. momordicae Isolates from Bitter Gourd in China

Bitter gourd (Momordica charantia L.) cultivated in China is regarded as an important vegetable crop and is of considerable economic importance. However, it is susceptible to fusarium wilt, which causes heavy economic losses. Forty‐eight isolates were isolated from diseased bitter gourd plants that displayed typical fusarium wilt symptoms. Based on the morphological features, the rDNA internal transcribed space (ITS) sequences, pathogenicity and host biotypes, all of the isolates tested were pathogenic to the susceptible bitter gourd plants species (cv. ‘Guinongke No. 2’) and were identified as Fusarium oxysporum f. sp. momordicae (FOM). Our results classified different isolates as slightly, moderately or highly virulent. Among the isolates tested, 43 isolates slightly infected bottle gourd (Lagenaria siceraria var. clavata), whereas they did not infect other species from the family Cucurbitaceae. Genetic diversity among 48 isolates was characterized using amplified fragment length polymorphism (AFLP) analysis. The number of bands amplified by each primer pairs ranged from 41 to 66, with sizes ranging from 200 to 500 bp. A total of 366 bands were observed, out of which 363 were polymorphic (99.14%). The Nei's genetic identity of the six geographical populations varied from 0.7362 to 0.9707. The mean Nei's gene diversity index (H = 0.2644) and the mean Shannon's information index (I = 0.4071) at species level were higher than ones at populations level, indicated that the variation within populations was greater than that among populations. The Nei's GST (0.5103) and gene flow (Nm = 0.4923) revealed that genetic differentiation was mainly among populations and few gene exchanges. The dendrogram obtained from AFLP marker showed that there was a good correlation between isolates from different geographical locations and their pathogenicity. The AFLP marker effectively distinguished the high virulent isolates from the less virulent isolates. The highly virulent isolates were distinctly separated in different clusters, which indicated a significantly high correlation with the geographical origin in the AFLP dendrogram. The pathogenicity and molecular marker analysis confirmed the presence of variation in virulence as well as genetic diversity among the FOM isolates studied.     

Genetic Diversity and Pathogenicity of Fusarium oxysporum f.sp. melonis Races from Different Areas of Italy

Fusarium wilt caused by Fusarium oxysporum f.sp. melonis (FOM) is a devastating disease of melon worldwide. Pathogenicity tests performed with F. oxysporum isolates obtained from Italian melon‐growing areas allowed to identify thirty‐four FOM isolates and the presence of all four races. The aims of this work were to examine genetic relatedness among FOM isolates by race determination and to perform phylogenetic analyses of identified FOM races including also other formae speciales of F. oxysporum of cucurbits. Results showed that FOM race 1,2 was the most numerous with a total of eighteen isolates, while six and nine isolates were identified as race 0 and 1, respectively, and just one isolate was assigned to race 2. Phylogenetic analysis was performed by random amplified polymorphic DNA (RAPD) profiling and by translation elongation factor‐1α (TEF‐1α) sequencing. The analysis of RAPD profiles separated FOM races into two distinct clades. Clade 1, which included races 0, 1 and 1,2, was further divided into ‘subclade a’ which grouped almost all race 1,2 isolates, and into ‘subclade b’ which included race 0 and 1 isolates. Clade 2 comprised only race 2 isolates. The phylogenetic analysis based on TEF‐1α separated FOM from the other formae speciales of F. oxysporum. Also with TEF‐1α analysis, FOM races 0, 1 and 1,2 isolates grouped in one single clade clearly separated from FOM race 2 isolates which grouped closer to F. oxysporum f.sp. cucumerinum. RAPD technique was more effective than TEF‐1α in differentiating FOM race 1,2 isolates from those belonging to the closely related races 0 and 1. Both phylogenetic analyses supported the close relationship between the three different FOM races which might imply the derivation from one another and the different origin of FOM race 2.     

Genetic and virulence variation in Fusarium oxysporum f. sp. cepae causing root and basal rot of common onion in Iran

Root and basal rot of common onion (Allium cepae L.) caused by Fusarium oxysporum f. sp. cepae is one of the most important diseases causing tremendous losses in onion‐growing areas worldwide. In this study, random amplified polymorphic DNA (RAPD), intersimple sequence repeats (ISSR) and virulence studies were conducted to analyse 26 F. oxysporum f. sp. cepae isolates obtained from the main onion‐growing regions of Iran, including Fars, Azerbaijan and Isfahan states. Cluster analysis using UPGMA method for both RAPD and ISSR markers revealed no clear grouping of the isolates obtained from different geographical regions, and the isolates were observed to derive probably from the same clonal lineage. Pathogenicity test indicated that all F. oxysporum f. sp. cepae isolates were pathogenic on onion; however, virulence variability was observed among the isolates. The grouping based on virulence variability was not correlated with the results of RAPD and ISSR analyses.     

A comparison of wild-type, old and modern tomato cultivars in the interaction with the arbuscular mycorrhizal fungus Glomus mosseae and the tomato pathogen Fusarium oxysporum f. sp. lycopersici

The effect of the arbuscular mycorrhizal symbiosis (AM) varies in plant cultivars. In the present study, we tested whether wild-type, old and modern tomato cultivars differ in the parameters of the AM interaction. Moreover, the bioprotective effect of AM against the soilborne tomato pathogen Fusarium oxysporum f. sp. lycopersici (Fol) was tested in the different cultivars. Ten tomato cultivars were inoculated with the arbuscular mycorrhizal fungus (AMF) Glomus mosseae alone or in combination with Fol. At the end of the experiment, AM root colonization, Fusarium infection, and the plant fresh weight was determined. The tomato cultivars differed in their susceptibility to AMF and Fol, but these differences were not cultivar age dependent. In all the cultivars affected by Fol, mycorrhization showed a bioprotective effect. Independent of the cultivar age, tomato cultivars differ in their susceptibility to AMF and Fol and the bioprotective effect of mycorrhization, indicating that the cultivar age does not affect the AM parameters tested in this study.