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Sublocalization of an Ataxia-Telangiectasia Gene Distal to D11S384 by Ancestral Haplotyping In Costa Rican Families
Authors:Nancy Uhrhammer  Ethan Lange  Oscar Porras  Arash Naeim  Xiaoguang Chen  Sepideh Sheikhavandi  Sujata Chiplunkar  Lan Yang  Sugandha Dandekar  Teresa Liang  Nima Patel  Sharon Teraoka  Nitin Udar  Nidia Calvo  Patrick Concannon  Kenneth Lange  and Richard A Gatti
Abstract:In an effort to localize a gene for ataxia-telangiectasia (A-T), we have genotyped 27 affected Costa Rican families, with 13 markers, in the chromosome 11q22-23 region. Significant linkage disequilibrium was detected for 9/13 markers between D11S1816 and D11S1391. Recombination events observed in these pedigrees places A-T between D11S1819 and D11S1960. One ancestral haplotype is common to 24/54 affected chromosomes and roughly two-thirds of the families. Inferred (ancestral) recombination events involving this common haplotype in earlier generations suggest that A-T is distal to D11S384 and proximal to D11S1960. Several other common haplotypes were identified, consistent with multiple mutations in a single gene. When considered together with all other evidence, this study further sublocalizes the major A-T locus to ≈200 kb, between markers S384 and S535.
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